CBN24827 (Caenorhabditis brenneri)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CBN24827 T301836_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-49
M02413_2.00 		Caenorhabditis elegans
NNNNWNHAN
NTDNWNNNN		 PBM
Weirauch et al.(2014)
pTH5891 		0.912 0.571
nhr-1
M00686_2.00 		Caenorhabditis elegans
ARTGATCA
TGATCAYT		 PBM
Narasimhan et al.(2015)
pTH9322 		0.886 0.586
nhr-154
M00698_2.00 		Caenorhabditis elegans
NRBRYCAHWD
HWDTGRYVYN		 PBM
Narasimhan et al.(2015)
pTH10650 		0.847 0.614
CBG23380
M01296_2.00 		Caenorhabditis briggsae
NDBDHHANWN
NWNTDDHVHN		 PBM
Lambert et al.(2019)
pTH11449 		0.846 0.629
nhr-204
M00704_2.00 		Caenorhabditis elegans
NDNTGRTMHN
NDKAYCANHN		 PBM
Narasimhan et al.(2015)
pTH10028 		0.785 0.471
CBG26996_CONSTRUCT
M01300_2.00 		PBM CONSTRUCTS
NNNNTGRWMN
NKWYCANNNN		 PBM
Lambert et al.(2019)
pTH11460 		0.767 0.486
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBN24827 Nuclear receptor 89 158

Links

Other Nuclear receptor family TFs
Other Caenorhabditis brenneri TFs

239 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACAC_0000711701 Angiostrongylus cantonensis ACAC_0000711701 I 0.914
ACAC_0001297301 Angiostrongylus cantonensis ACAC_0001297301 I 0.905
ACOC_0000700901 Angiostrongylus costaricensis ACOC_0000700901 I 0.881
ACOC_0000869501 Angiostrongylus costaricensis ACOC_0000869501 I 0.797
ALUE_0001920701 Ascaris lumbricoides ALUE_0001920701 N 0.821
ALUE_0002179401 Ascaris lumbricoides ALUE_0002179401 I 0.877
ANCCAN_09880 Ancylostoma caninum ANCCAN_09880 I 0.937
ANCCAN_14103 Ancylostoma caninum ANCCAN_14103 I 0.879
ANCCAN_17081 Ancylostoma caninum ANCCAN_17081 I 0.879
ANCCAN_20955 Ancylostoma caninum ANCCAN_20955 N 0.775
ANCCEY_01235 Ancylostoma ceylanicum ANCCEY_01235 N 0.825
ANCCEY_01254 Ancylostoma ceylanicum ANCCEY_01254 I 0.970
ANCCEY_01961 Ancylostoma ceylanicum ANCCEY_01961 I 0.886
ASIM_0001308601 Anisakis simplex ASIM_0001308601 I 0.829
ASIM_0001569801 Anisakis simplex ASIM_0001569801 I 0.987
ASU_02757 Ascaris suum ASU_02757 N 0.755
ASU_02770 Ascaris suum ASU_02770 I 0.754
ASU_03657 Ascaris suum ASU_03657 I 0.980
ASU_03870 Ascaris suum ASU_03870 I 0.912
ASU_10584 Ascaris suum ASU_10584 I 0.829
ASU_12501 Ascaris suum ASU_12501 I 0.877
ASU_13587 Ascaris suum ASU_13587 I 0.790
augustus_masked-nMf.1.1.scaf06210-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf06210-processed-gene-0.0 I 0.916
augustus_masked-nMf.1.1.scaf15282-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf15282-processed-gene-0.0 I 0.866
augustus_masked-nMf.1.1.scaf15936-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf15936-processed-gene-0.0 I 0.866
augustus_masked-nMf.1.1.scaf24822-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf24822-processed-gene-0.0 I 0.906
Bm4980 Brugia malayi Bm4980 I 0.914
Bm5319 Brugia malayi Bm5319 I 0.881
BTMF_0000217201 Brugia timori BTMF_0000217201 I 0.914
BTMF_0000941401 Brugia timori BTMF_0000941401 I 0.975
BTMF_0001388101 Brugia timori BTMF_0001388101 I 0.881
BXY_0360200 Bursaphelenchus xylophilus BXY_0360200 I 0.889
BXY_0599800 Bursaphelenchus xylophilus BXY_0599800 I 0.940
BXY_0631600 Bursaphelenchus xylophilus BXY_0631600 I 0.862
BXY_1057600 Bursaphelenchus xylophilus BXY_1057600 I 0.913
BXY_1375200 Bursaphelenchus xylophilus BXY_1375200 I 0.768
CBG01866 Caenorhabditis briggsae CBG01866 I 0.886
CBG03844 Caenorhabditis briggsae CBG03844 I 0.912
CBG09380 Caenorhabditis briggsae CBG09380 I 0.849
CBG10855 Caenorhabditis briggsae CBG10855 I 0.994
CBG10857 Caenorhabditis briggsae CBG10857 I 0.975
CBG16594 Caenorhabditis briggsae CBG16594 I 0.857
CBG23318 Caenorhabditis briggsae CBG23318 I 0.763
CBG23319 Caenorhabditis briggsae CBG23319 I 0.761
CBG23380 Caenorhabditis briggsae CBG23380 D 0.846
CBG23381 Caenorhabditis briggsae CBG23381 I 0.832
CBG26996 Caenorhabditis briggsae CBG26996 I 0.767
CBG26996_CONSTRUCT PBM CONSTRUCTS CBG26996_CONSTRUCT D 0.767
CBN15481 Caenorhabditis brenneri CBN15481 I 0.789
CBN18198 Caenorhabditis brenneri CBN18198 I 0.912
CBN19235 Caenorhabditis brenneri CBN19235 I 0.886
CBN19664 Caenorhabditis brenneri CBN19664 N 0.775
CBN20518 Caenorhabditis brenneri CBN20518 I 0.857
CBN20749 Caenorhabditis brenneri CBN20749 I 0.912
CBN23409 Caenorhabditis brenneri CBN23409 I 0.768
CBN28056 Caenorhabditis brenneri CBN28056 I 0.768
CBN28497 Caenorhabditis brenneri CBN28497 I 0.846
CBN28528 Caenorhabditis brenneri CBN28528 I 0.789
CBN28791 Caenorhabditis brenneri CBN28791 I 0.819
CBN29725 Caenorhabditis brenneri CBN29725 I 0.851
CBN30215 Caenorhabditis brenneri CBN30215 I 0.748
CJA00680 Caenorhabditis japonica CJA00680 I 0.966
CJA08896 Caenorhabditis japonica CJA08896 I 0.994
CJA13458 Caenorhabditis japonica CJA13458 I 0.886
CJA14829 Caenorhabditis japonica CJA14829 I 0.763
CJA41479 Caenorhabditis japonica CJA41479 I 0.788
CRE00149 Caenorhabditis remanei CRE00149 I 0.993
CRE00606 Caenorhabditis remanei CRE00606 I 0.975
CRE03310 Caenorhabditis remanei CRE03310 I 0.886
CRE08259 Caenorhabditis remanei CRE08259 I 0.912
CRE25378 Caenorhabditis remanei CRE25378 I 0.860
CRE26981 Caenorhabditis remanei CRE26981 I 0.807
CRE26982 Caenorhabditis remanei CRE26982 I 0.761
CRE27050 Caenorhabditis remanei CRE27050 I 0.846
CRE27052 Caenorhabditis remanei CRE27052 I 0.813
CRE27053 Caenorhabditis remanei CRE27053 I 0.851
CRE30787 Caenorhabditis remanei CRE30787 I 0.790
DICVIV_00957 Dictyocaulus viviparus DICVIV_00957 I 0.914
DICVIV_03784 Dictyocaulus viviparus DICVIV_03784 I 0.757
DICVIV_09815 Dictyocaulus viviparus DICVIV_09815 I 0.881
DME_0000591901 Dracunculus medinensis DME_0000591901 I 0.902
DME_0000693601 Dracunculus medinensis DME_0000693601 I 0.881
DME_0000747901 Dracunculus medinensis DME_0000747901 I 0.796
EEL_0000204901 Elaeophora elaphi EEL_0000204901 I 0.745
EEL_0000989101 Elaeophora elaphi EEL_0000989101 I 0.974
EVEC_0000027301 Enterobius vermicularis EVEC_0000027301 I 0.885
EVEC_0000477801 Enterobius vermicularis EVEC_0000477801 I 0.754
EVEC_0001313601 Enterobius vermicularis EVEC_0001313601 I 0.885
GPLIN_000337500 Globodera pallida GPLIN_000337500 I 0.946
GPLIN_001175700 Globodera pallida GPLIN_001175700 I 0.913
Hba_12763 Heterorhabditis bacteriophora Hba_12763 I 0.896
Hba_12764 Heterorhabditis bacteriophora Hba_12764 N 0.870
HCOI00601000 Haemonchus contortus HCOI00601000 I 0.867
HCOI00618700 Haemonchus contortus HCOI00618700 I 0.914
HCOI00673400 Haemonchus contortus HCOI00673400 I 0.797
HCOI01292200 Haemonchus contortus HCOI01292200 I 0.986
HCOI01525900 Haemonchus contortus HCOI01525900 I 0.938
HCOI01554200 Haemonchus contortus HCOI01554200 I 0.886
HCOI01687000 Haemonchus contortus HCOI01687000 I 0.797
HPBE_0000704501 Heligmosomoides bakeri HPBE_0000704501 I 0.975
HPBE_0000837301 Heligmosomoides bakeri HPBE_0000837301 I 0.886
HPBE_0001154501 Heligmosomoides bakeri HPBE_0001154501 I 0.797
HPBE_0001246601 Heligmosomoides bakeri HPBE_0001246601 I 0.941
HPLM_0000564201 Haemonchus placei HPLM_0000564201 I 0.867
HPLM_0000769401 Haemonchus placei HPLM_0000769401 I 0.986
L596_g11035 Steinernema carpocapsae L596_g11035 I 0.935
L596_g12276 Steinernema carpocapsae L596_g12276 I 0.882
L596_g12321 Steinernema carpocapsae L596_g12321 I 0.883
L596_g19151 Steinernema carpocapsae L596_g19151 I 0.829
L596_g23123 Steinernema carpocapsae L596_g23123 I 0.754
L596_g23777 Steinernema carpocapsae L596_g23777 I 0.878
L596_g23863 Steinernema carpocapsae L596_g23863 I 0.974
L596_g27472 Steinernema carpocapsae L596_g27472 I 0.986
L889_g11570 Steinernema feltiae L889_g11570 I 0.753
L889_g1557 Steinernema feltiae L889_g1557 I 0.983
L889_g17247 Steinernema feltiae L889_g17247 I 0.935
L889_g1891 Steinernema feltiae L889_g1891 I 0.984
L889_g22901 Steinernema feltiae L889_g22901 I 0.829
L889_g29879 Steinernema feltiae L889_g29879 I 0.883
L889_g7780 Steinernema feltiae L889_g7780 I 0.882
L892_g17612 Steinernema scapterisci L892_g17612 I 0.991
L892_g4134 Steinernema scapterisci L892_g4134 I 0.751
L892_g4169 Steinernema scapterisci L892_g4169 I 0.988
L892_g5079 Steinernema scapterisci L892_g5079 I 0.829
L892_g8671 Steinernema scapterisci L892_g8671 I 0.882
L893_g13285 Steinernema glaseri L893_g13285 I 0.935
L893_g15276 Steinernema glaseri L893_g15276 I 0.829
L893_g21283 Steinernema glaseri L893_g21283 I 0.753
L893_g25227 Steinernema glaseri L893_g25227 I 0.878
L893_g28857 Steinernema glaseri L893_g28857 I 0.984
L893_g3010 Steinernema glaseri L893_g3010 I 0.883
L893_g3565 Steinernema glaseri L893_g3565 I 0.991
L898_g22454 Steinernema monticolum L898_g22454 I 0.882
L898_g23058 Steinernema monticolum L898_g23058 I 0.753
L898_g26357 Steinernema monticolum L898_g26357 I 0.935
L898_g2764 Steinernema monticolum L898_g2764 I 0.883
L898_g8573 Steinernema monticolum L898_g8573 I 0.829
L898_g9866 Steinernema monticolum L898_g9866 I 0.983
LOAG_00300 Loa loa LOAG_00300 I 0.881
LOAG_08615 Loa loa LOAG_08615 I 0.912
LOAG_08636 Loa loa LOAG_08636 I 0.745
LOAG_16377 Loa loa LOAG_16377 I 0.975
MhA1_Contig2491.frz3.gene4 Meloidogyne hapla MhA1_Contig2491.frz3.gene4 I 0.858
MhA1_Contig320.frz3.gene45 Meloidogyne hapla MhA1_Contig320.frz3.gene45 I 0.861
nAv.1.0.1.g09196 Acanthocheilonema viteae nAv.1.0.1.g09196 I 0.745
NBR_0001576001 Nippostrongylus brasiliensis NBR_0001576001 I 0.794
nDi.2.2.2.g02318 Dirofilaria immitis nDi.2.2.2.g02318 I 0.881
nDi.2.2.2.g09348 Dirofilaria immitis nDi.2.2.2.g09348 I 0.745
NECAME_00872 Necator americanus NECAME_00872 I 0.877
NECAME_01944 Necator americanus NECAME_01944 I 0.943
NECAME_08394 Necator americanus NECAME_08394 I 0.989
nhr-1 Caenorhabditis elegans WBGene00003600 D 0.886
nhr-10 Caenorhabditis elegans WBGene00003609 I 0.872
nhr-101 Caenorhabditis elegans WBGene00003691 I 0.792
nhr-120 Caenorhabditis elegans WBGene00003710 I 0.994
nhr-136 Caenorhabditis elegans WBGene00003726 I 0.894
nhr-141 Caenorhabditis elegans WBGene00017787 I 0.816
nhr-153 Caenorhabditis elegans WBGene00007546 I 0.825
nhr-154 Caenorhabditis elegans WBGene00007547 D 0.847
nhr-173 Caenorhabditis elegans WBGene00016975 I 0.975
nhr-204 Caenorhabditis elegans WBGene00019816 D 0.785
nhr-47 Caenorhabditis elegans WBGene00003637 I 0.790
nhr-49 Caenorhabditis elegans WBGene00003639 D 0.912
nhr-68 Caenorhabditis elegans WBGene00003658 I 0.763
nLs.2.1.2.g04051 Litomosoides sigmodontis nLs.2.1.2.g04051 I 0.761
nOo.2.0.1.g01530 Onchocerca ochengi nOo.2.0.1.g01530 I 0.881
nOo.2.0.1.g02345 Onchocerca ochengi nOo.2.0.1.g02345 I 0.912
nOo.2.0.1.g03859 Onchocerca ochengi nOo.2.0.1.g03859 I 0.745
OFLC_0001450101 Onchocerca flexuosa OFLC_0001450101 I 0.881
PEQ_0000391501 Parascaris equorum PEQ_0000391501 I 0.912
PEQ_0000722401 Parascaris equorum PEQ_0000722401 I 0.980
Ppa-nhr-120 Pristionchus pacificus PPA00183 I 0.969
PPA06637 Pristionchus pacificus PPA06637 I 0.924
PPA10975 Pristionchus pacificus PPA10975 N 0.896
PPA21777 Pristionchus pacificus PPA21777 I 0.984
PPA24468 Pristionchus pacificus PPA24468 I 0.878
PPA24481 Pristionchus pacificus PPA24481 I 0.956
PPA27013 Pristionchus pacificus PPA27013 N 0.778
PPA29597 Pristionchus pacificus PPA29597 I 0.948
PTRK_0000194200 Parastrongyloides trichosuri PTRK_0000194200 I 0.784
PTRK_0000480700 Parastrongyloides trichosuri PTRK_0000480700 I 0.919
PTRK_0000720500 Parastrongyloides trichosuri PTRK_0000720500 I 0.907
PTRK_0000994100 Parastrongyloides trichosuri PTRK_0000994100 I 0.926
PTRK_0001020800 Parastrongyloides trichosuri PTRK_0001020800 I 0.925
PTRK_0001312000 Parastrongyloides trichosuri PTRK_0001312000 I 0.890
RSKR_0000342500 Rhabditophanes kr3021 RSKR_0000342500 I 0.893
RSKR_0001067400 Rhabditophanes kr3021 RSKR_0001067400 I 0.750
RSKR_0001171300 Rhabditophanes kr3021 RSKR_0001171300 I 0.844
RSKR_0001175400 Rhabditophanes kr3021 RSKR_0001175400 I 0.745
scaffold178-EXSNAP2012.20 Pristionchus exspectatus scaffold178-EXSNAP2012.20 N 0.757
scaffold204-EXSNAP2012.8 Pristionchus exspectatus scaffold204-EXSNAP2012.8 N 0.780
scaffold251-EXSNAP2012.44 Pristionchus exspectatus scaffold251-EXSNAP2012.44 I 0.927
scaffold265-EXSNAP2012.2 Pristionchus exspectatus scaffold265-EXSNAP2012.2 I 0.878
scaffold314-EXSNAP2012.19 Pristionchus exspectatus scaffold314-EXSNAP2012.19 I 0.821
scaffold384-EXSNAP2012.4 Pristionchus exspectatus scaffold384-EXSNAP2012.4 I 0.969
scaffold426-EXSNAP2012.35 Pristionchus exspectatus scaffold426-EXSNAP2012.35 I 0.942
scaffold43-EXSNAP2012.41 Pristionchus exspectatus scaffold43-EXSNAP2012.41 I 0.987
scaffold552-EXSNAP2012.17 Pristionchus exspectatus scaffold552-EXSNAP2012.17 I 0.956
scaffold552-EXSNAP2012.18 Pristionchus exspectatus scaffold552-EXSNAP2012.18 I 0.946
scaffold572-EXSNAP2012.7 Pristionchus exspectatus scaffold572-EXSNAP2012.7 I 0.969
scaffold598-EXSNAP2012.5 Pristionchus exspectatus scaffold598-EXSNAP2012.5 I 0.925
scaffold605-EXSNAP2012.9 Pristionchus exspectatus scaffold605-EXSNAP2012.9 I 0.935
scaffold826-EXSNAP2012.10 Pristionchus exspectatus scaffold826-EXSNAP2012.10 I 0.927
scaffold92-EXSNAP2012.31 Pristionchus exspectatus scaffold92-EXSNAP2012.31 N 0.846
SMUV_0000475001 Syphacia muris SMUV_0000475001 I 0.836
SMUV_0000657401 Syphacia muris SMUV_0000657401 I 0.754
SMUV_0000708401 Syphacia muris SMUV_0000708401 I 0.881
SMUV_0001072301 Syphacia muris SMUV_0001072301 I 0.859
SPAL_0000038800 Strongyloides papillosus SPAL_0000038800 I 0.768
SPAL_0000231300 Strongyloides papillosus SPAL_0000231300 I 0.780
SPAL_0000490500 Strongyloides papillosus SPAL_0000490500 I 0.879
SPAL_0000841700 Strongyloides papillosus SPAL_0000841700 I 0.907
SPAL_0001099500 Strongyloides papillosus SPAL_0001099500 I 0.925
SPAL_0001637600 Strongyloides papillosus SPAL_0001637600 I 0.928
SPAL_0001712900 Strongyloides papillosus SPAL_0001712900 I 0.919
SSTP_0000055100 Strongyloides stercoralis SSTP_0000055100 I 0.928
SSTP_0000145700 Strongyloides stercoralis SSTP_0000145700 I 0.907
SSTP_0000408200 Strongyloides stercoralis SSTP_0000408200 I 0.783
SSTP_0000546600 Strongyloides stercoralis SSTP_0000546600 I 0.895
SSTP_0000769100 Strongyloides stercoralis SSTP_0000769100 I 0.925
SSTP_0001081300 Strongyloides stercoralis SSTP_0001081300 I 0.787
SSTP_0001253400 Strongyloides stercoralis SSTP_0001253400 I 0.919
SVE_0146100 Strongyloides venezuelensis SVE_0146100 I 0.919
SVE_0268000 Strongyloides venezuelensis SVE_0268000 I 0.772
SVE_0429000 Strongyloides venezuelensis SVE_0429000 I 0.928
SVE_0858700 Strongyloides venezuelensis SVE_0858700 I 0.925
SVE_1749000 Strongyloides venezuelensis SVE_1749000 I 0.783
SVE_1799100 Strongyloides venezuelensis SVE_1799100 I 0.907
SVE_1951500 Strongyloides venezuelensis SVE_1951500 I 0.879
TCLT_0000256201 Thelazia callipaeda TCLT_0000256201 I 0.944
TCLT_0000399401 Thelazia callipaeda TCLT_0000399401 I 0.881
TCLT_0000461101 Thelazia callipaeda TCLT_0000461101 I 0.914
TCLT_0000612301 Thelazia callipaeda TCLT_0000612301 I 0.803
TCNE_0001076801 Toxocara canis TCNE_0001076801 N 0.810
TELCIR_12561 Teladorsagia circumcincta TELCIR_12561 N 0.800
WBGene00236987 Onchocerca volvulus WBGene00236987 I 0.912
WBGene00240403 Onchocerca volvulus WBGene00240403 I 0.971
WBGene00240560 Onchocerca volvulus WBGene00240560 I 0.745
WBGene00241993 Onchocerca volvulus WBGene00241993 I 0.872