CJA08896 (Caenorhabditis japonica)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CJA08896 T301955_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-49
M02413_2.00 		Caenorhabditis elegans
NNNNWNHAN
NTDNWNNNN		 PBM
Weirauch et al.(2014)
pTH5891 		0.911 0.571
nhr-1
M00686_2.00 		Caenorhabditis elegans
ARTGATCA
TGATCAYT		 PBM
Narasimhan et al.(2015)
pTH9322 		0.890 0.600
nhr-154
M00698_2.00 		Caenorhabditis elegans
NRBRYCAHWD
HWDTGRYVYN		 PBM
Narasimhan et al.(2015)
pTH10650 		0.845 0.614
CBG23380
M01296_2.00 		Caenorhabditis briggsae
NDBDHHANWN
NWNTDDHVHN		 PBM
Lambert et al.(2019)
pTH11449 		0.844 0.629
nhr-204
M00704_2.00 		Caenorhabditis elegans
NDNTGRTMHN
NDKAYCANHN		 PBM
Narasimhan et al.(2015)
pTH10028 		0.782 0.486
CBG26996_CONSTRUCT
M01300_2.00 		PBM CONSTRUCTS
NNNNTGRWMN
NKWYCANNNN		 PBM
Lambert et al.(2019)
pTH11460 		0.765 0.500
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CJA08896 Nuclear receptor 88 157

Links

Other Nuclear receptor family TFs
Other Caenorhabditis japonica TFs

239 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g09196 Acanthocheilonema viteae nAv.1.0.1.g09196 I 0.746
ANCCAN_09880 Ancylostoma caninum ANCCAN_09880 I 0.937
ANCCAN_14103 Ancylostoma caninum ANCCAN_14103 I 0.891
ANCCAN_17081 Ancylostoma caninum ANCCAN_17081 I 0.891
ANCCAN_20955 Ancylostoma caninum ANCCAN_20955 N 0.773
ANCCEY_01235 Ancylostoma ceylanicum ANCCEY_01235 N 0.823
ANCCEY_01254 Ancylostoma ceylanicum ANCCEY_01254 I 0.970
ANCCEY_01961 Ancylostoma ceylanicum ANCCEY_01961 I 0.890
ACAC_0000711701 Angiostrongylus cantonensis ACAC_0000711701 I 0.913
ACAC_0001297301 Angiostrongylus cantonensis ACAC_0001297301 I 0.915
ACOC_0000700901 Angiostrongylus costaricensis ACOC_0000700901 I 0.885
ACOC_0000869501 Angiostrongylus costaricensis ACOC_0000869501 I 0.787
ASIM_0001308601 Anisakis simplex ASIM_0001308601 I 0.829
ASIM_0001569801 Anisakis simplex ASIM_0001569801 I 0.987
ALUE_0001920701 Ascaris lumbricoides ALUE_0001920701 N 0.819
ALUE_0002179401 Ascaris lumbricoides ALUE_0002179401 I 0.880
ASU_02757 Ascaris suum ASU_02757 N 0.752
ASU_02770 Ascaris suum ASU_02770 I 0.754
ASU_03657 Ascaris suum ASU_03657 I 0.981
ASU_03870 Ascaris suum ASU_03870 I 0.911
ASU_10584 Ascaris suum ASU_10584 I 0.835
ASU_12501 Ascaris suum ASU_12501 I 0.880
ASU_13587 Ascaris suum ASU_13587 I 0.791
Bm4980 Brugia malayi Bm4980 I 0.913
Bm5319 Brugia malayi Bm5319 I 0.885
BTMF_0000217201 Brugia timori BTMF_0000217201 I 0.913
BTMF_0000941401 Brugia timori BTMF_0000941401 I 0.976
BTMF_0001388101 Brugia timori BTMF_0001388101 I 0.885
BXY_0360200 Bursaphelenchus xylophilus BXY_0360200 I 0.893
BXY_0599800 Bursaphelenchus xylophilus BXY_0599800 I 0.941
BXY_0631600 Bursaphelenchus xylophilus BXY_0631600 I 0.863
BXY_1057600 Bursaphelenchus xylophilus BXY_1057600 I 0.911
BXY_1375200 Bursaphelenchus xylophilus BXY_1375200 I 0.769
CBN15481 Caenorhabditis brenneri CBN15481 I 0.780
CBN18198 Caenorhabditis brenneri CBN18198 I 0.911
CBN19235 Caenorhabditis brenneri CBN19235 I 0.890
CBN19664 Caenorhabditis brenneri CBN19664 N 0.773
CBN20518 Caenorhabditis brenneri CBN20518 I 0.860
CBN20749 Caenorhabditis brenneri CBN20749 I 0.911
CBN23409 Caenorhabditis brenneri CBN23409 I 0.766
CBN24827 Caenorhabditis brenneri CBN24827 I 0.994
CBN28056 Caenorhabditis brenneri CBN28056 I 0.766
CBN28497 Caenorhabditis brenneri CBN28497 I 0.844
CBN28528 Caenorhabditis brenneri CBN28528 I 0.780
CBN28791 Caenorhabditis brenneri CBN28791 I 0.820
CBN29725 Caenorhabditis brenneri CBN29725 I 0.849
CBN30215 Caenorhabditis brenneri CBN30215 I 0.748
CBG01866 Caenorhabditis briggsae CBG01866 I 0.890
CBG03844 Caenorhabditis briggsae CBG03844 I 0.911
CBG09380 Caenorhabditis briggsae CBG09380 I 0.842
CBG10855 Caenorhabditis briggsae CBG10855 I 0.994
CBG10857 Caenorhabditis briggsae CBG10857 I 0.975
CBG16594 Caenorhabditis briggsae CBG16594 I 0.860
CBG23318 Caenorhabditis briggsae CBG23318 I 0.763
CBG23319 Caenorhabditis briggsae CBG23319 I 0.765
CBG23380 Caenorhabditis briggsae CBG23380 D 0.844
CBG23381 Caenorhabditis briggsae CBG23381 I 0.832
CBG26996 Caenorhabditis briggsae CBG26996 I 0.765
nhr-1 Caenorhabditis elegans WBGene00003600 D 0.890
nhr-10 Caenorhabditis elegans WBGene00003609 I 0.875
nhr-47 Caenorhabditis elegans WBGene00003637 I 0.780
nhr-49 Caenorhabditis elegans WBGene00003639 D 0.911
nhr-68 Caenorhabditis elegans WBGene00003658 I 0.763
nhr-101 Caenorhabditis elegans WBGene00003691 I 0.793
nhr-120 Caenorhabditis elegans WBGene00003710 I 0.994
nhr-136 Caenorhabditis elegans WBGene00003726 I 0.893
nhr-153 Caenorhabditis elegans WBGene00007546 I 0.825
nhr-154 Caenorhabditis elegans WBGene00007547 D 0.845
nhr-173 Caenorhabditis elegans WBGene00016975 I 0.975
nhr-141 Caenorhabditis elegans WBGene00017787 I 0.816
nhr-204 Caenorhabditis elegans WBGene00019816 D 0.782
CJA00680 Caenorhabditis japonica CJA00680 I 0.966
CJA01292 Caenorhabditis japonica CJA01292 I 0.748
CJA13458 Caenorhabditis japonica CJA13458 I 0.890
CJA14829 Caenorhabditis japonica CJA14829 I 0.747
CJA41479 Caenorhabditis japonica CJA41479 I 0.788
CRE00149 Caenorhabditis remanei CRE00149 I 0.994
CRE00606 Caenorhabditis remanei CRE00606 I 0.975
CRE03310 Caenorhabditis remanei CRE03310 I 0.890
CRE08259 Caenorhabditis remanei CRE08259 I 0.911
CRE25378 Caenorhabditis remanei CRE25378 I 0.862
CRE26981 Caenorhabditis remanei CRE26981 I 0.808
CRE26982 Caenorhabditis remanei CRE26982 I 0.761
CRE27050 Caenorhabditis remanei CRE27050 I 0.844
CRE27052 Caenorhabditis remanei CRE27052 I 0.814
CRE27053 Caenorhabditis remanei CRE27053 I 0.849
CRE30787 Caenorhabditis remanei CRE30787 I 0.780
DICVIV_00957 Dictyocaulus viviparus DICVIV_00957 I 0.913
DICVIV_03784 Dictyocaulus viviparus DICVIV_03784 I 0.747
DICVIV_09815 Dictyocaulus viviparus DICVIV_09815 I 0.885
nDi.2.2.2.g02318 Dirofilaria immitis nDi.2.2.2.g02318 I 0.885
nDi.2.2.2.g09348 Dirofilaria immitis nDi.2.2.2.g09348 I 0.746
DME_0000591901 Dracunculus medinensis DME_0000591901 I 0.901
DME_0000693601 Dracunculus medinensis DME_0000693601 I 0.885
DME_0000747901 Dracunculus medinensis DME_0000747901 I 0.794
EEL_0000204901 Elaeophora elaphi EEL_0000204901 I 0.746
EEL_0000989101 Elaeophora elaphi EEL_0000989101 I 0.974
EVEC_0000027301 Enterobius vermicularis EVEC_0000027301 I 0.889
EVEC_0000477801 Enterobius vermicularis EVEC_0000477801 I 0.754
EVEC_0001313601 Enterobius vermicularis EVEC_0001313601 I 0.887
GPLIN_000337500 Globodera pallida GPLIN_000337500 I 0.948
GPLIN_001175700 Globodera pallida GPLIN_001175700 I 0.911
HCOI00601000 Haemonchus contortus HCOI00601000 I 0.880
HCOI00618700 Haemonchus contortus HCOI00618700 I 0.913
HCOI00673400 Haemonchus contortus HCOI00673400 I 0.787
HCOI01292200 Haemonchus contortus HCOI01292200 I 0.986
HCOI01525900 Haemonchus contortus HCOI01525900 I 0.938
HCOI01554200 Haemonchus contortus HCOI01554200 I 0.890
HCOI01687000 Haemonchus contortus HCOI01687000 I 0.787
HPLM_0000564201 Haemonchus placei HPLM_0000564201 I 0.880
HPLM_0000769401 Haemonchus placei HPLM_0000769401 I 0.986
HPBE_0000704501 Heligmosomoides bakeri HPBE_0000704501 I 0.974
HPBE_0000837301 Heligmosomoides bakeri HPBE_0000837301 I 0.890
HPBE_0001154501 Heligmosomoides bakeri HPBE_0001154501 I 0.787
HPBE_0001246601 Heligmosomoides bakeri HPBE_0001246601 I 0.940
Hba_12763 Heterorhabditis bacteriophora Hba_12763 I 0.896
Hba_12764 Heterorhabditis bacteriophora Hba_12764 N 0.869
nLs.2.1.2.g04051 Litomosoides sigmodontis nLs.2.1.2.g04051 I 0.762
LOAG_00300 Loa loa LOAG_00300 I 0.885
LOAG_08615 Loa loa LOAG_08615 I 0.911
LOAG_08636 Loa loa LOAG_08636 I 0.746
LOAG_16377 Loa loa LOAG_16377 I 0.976
augustus_masked-nMf.1.1.scaf06210-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf06210-processed-gene-0.0 I 0.918
augustus_masked-nMf.1.1.scaf15282-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf15282-processed-gene-0.0 I 0.879
augustus_masked-nMf.1.1.scaf15936-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf15936-processed-gene-0.0 I 0.879
augustus_masked-nMf.1.1.scaf24822-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf24822-processed-gene-0.0 I 0.907
MhA1_Contig2491.frz3.gene4 Meloidogyne hapla MhA1_Contig2491.frz3.gene4 I 0.859
MhA1_Contig320.frz3.gene45 Meloidogyne hapla MhA1_Contig320.frz3.gene45 I 0.874
NECAME_00872 Necator americanus NECAME_00872 I 0.880
NECAME_01944 Necator americanus NECAME_01944 I 0.943
NECAME_08394 Necator americanus NECAME_08394 I 0.989
NBR_0001576001 Nippostrongylus brasiliensis NBR_0001576001 I 0.793
OFLC_0001450101 Onchocerca flexuosa OFLC_0001450101 I 0.885
nOo.2.0.1.g01530 Onchocerca ochengi nOo.2.0.1.g01530 I 0.885
nOo.2.0.1.g02345 Onchocerca ochengi nOo.2.0.1.g02345 I 0.911
nOo.2.0.1.g03859 Onchocerca ochengi nOo.2.0.1.g03859 I 0.746
WBGene00236987 Onchocerca volvulus WBGene00236987 I 0.911
WBGene00240403 Onchocerca volvulus WBGene00240403 I 0.972
WBGene00240560 Onchocerca volvulus WBGene00240560 I 0.746
WBGene00241993 Onchocerca volvulus WBGene00241993 I 0.876
PEQ_0000391501 Parascaris equorum PEQ_0000391501 I 0.911
PEQ_0000722401 Parascaris equorum PEQ_0000722401 I 0.981
PTRK_0000194200 Parastrongyloides trichosuri PTRK_0000194200 I 0.787
PTRK_0000480700 Parastrongyloides trichosuri PTRK_0000480700 I 0.919
PTRK_0000720500 Parastrongyloides trichosuri PTRK_0000720500 I 0.911
PTRK_0000994100 Parastrongyloides trichosuri PTRK_0000994100 I 0.924
PTRK_0001020800 Parastrongyloides trichosuri PTRK_0001020800 I 0.925
PTRK_0001312000 Parastrongyloides trichosuri PTRK_0001312000 I 0.883
CBG26996_CONSTRUCT PBM CONSTRUCTS CBG26996_CONSTRUCT D 0.765
scaffold178-EXSNAP2012.20 Pristionchus exspectatus scaffold178-EXSNAP2012.20 N 0.753
scaffold204-EXSNAP2012.8 Pristionchus exspectatus scaffold204-EXSNAP2012.8 N 0.779
scaffold251-EXSNAP2012.44 Pristionchus exspectatus scaffold251-EXSNAP2012.44 I 0.925
scaffold265-EXSNAP2012.2 Pristionchus exspectatus scaffold265-EXSNAP2012.2 I 0.867
scaffold314-EXSNAP2012.19 Pristionchus exspectatus scaffold314-EXSNAP2012.19 I 0.833
scaffold384-EXSNAP2012.4 Pristionchus exspectatus scaffold384-EXSNAP2012.4 I 0.969
scaffold426-EXSNAP2012.35 Pristionchus exspectatus scaffold426-EXSNAP2012.35 I 0.941
scaffold43-EXSNAP2012.41 Pristionchus exspectatus scaffold43-EXSNAP2012.41 I 0.988
scaffold552-EXSNAP2012.17 Pristionchus exspectatus scaffold552-EXSNAP2012.17 I 0.954
scaffold552-EXSNAP2012.18 Pristionchus exspectatus scaffold552-EXSNAP2012.18 I 0.946
scaffold572-EXSNAP2012.7 Pristionchus exspectatus scaffold572-EXSNAP2012.7 I 0.969
scaffold598-EXSNAP2012.5 Pristionchus exspectatus scaffold598-EXSNAP2012.5 I 0.922
scaffold605-EXSNAP2012.9 Pristionchus exspectatus scaffold605-EXSNAP2012.9 I 0.934
scaffold826-EXSNAP2012.10 Pristionchus exspectatus scaffold826-EXSNAP2012.10 I 0.925
scaffold92-EXSNAP2012.31 Pristionchus exspectatus scaffold92-EXSNAP2012.31 N 0.845
Ppa-nhr-120 Pristionchus pacificus PPA00183 I 0.969
PPA06637 Pristionchus pacificus PPA06637 I 0.924
PPA10975 Pristionchus pacificus PPA10975 N 0.894
PPA21777 Pristionchus pacificus PPA21777 I 0.985
PPA24468 Pristionchus pacificus PPA24468 I 0.867
PPA24481 Pristionchus pacificus PPA24481 I 0.954
PPA27013 Pristionchus pacificus PPA27013 N 0.775
PPA29597 Pristionchus pacificus PPA29597 I 0.948
RSKR_0000342500 Rhabditophanes kr3021 RSKR_0000342500 I 0.892
RSKR_0001067400 Rhabditophanes kr3021 RSKR_0001067400 I 0.747
RSKR_0001171300 Rhabditophanes kr3021 RSKR_0001171300 I 0.832
L596_g11035 Steinernema carpocapsae L596_g11035 I 0.933
L596_g12276 Steinernema carpocapsae L596_g12276 I 0.886
L596_g12321 Steinernema carpocapsae L596_g12321 I 0.887
L596_g19151 Steinernema carpocapsae L596_g19151 I 0.835
L596_g23123 Steinernema carpocapsae L596_g23123 I 0.754
L596_g23777 Steinernema carpocapsae L596_g23777 I 0.880
L596_g23863 Steinernema carpocapsae L596_g23863 I 0.973
L596_g27472 Steinernema carpocapsae L596_g27472 I 0.986
L889_g11570 Steinernema feltiae L889_g11570 I 0.753
L889_g1557 Steinernema feltiae L889_g1557 I 0.982
L889_g17247 Steinernema feltiae L889_g17247 I 0.933
L889_g1891 Steinernema feltiae L889_g1891 I 0.984
L889_g22901 Steinernema feltiae L889_g22901 I 0.835
L889_g29879 Steinernema feltiae L889_g29879 I 0.887
L889_g7780 Steinernema feltiae L889_g7780 I 0.886
L893_g13285 Steinernema glaseri L893_g13285 I 0.934
L893_g15276 Steinernema glaseri L893_g15276 I 0.835
L893_g21283 Steinernema glaseri L893_g21283 I 0.753
L893_g25227 Steinernema glaseri L893_g25227 I 0.880
L893_g28857 Steinernema glaseri L893_g28857 I 0.984
L893_g3010 Steinernema glaseri L893_g3010 I 0.887
L893_g3565 Steinernema glaseri L893_g3565 I 0.991
L898_g22454 Steinernema monticolum L898_g22454 I 0.886
L898_g23058 Steinernema monticolum L898_g23058 I 0.753
L898_g26357 Steinernema monticolum L898_g26357 I 0.933
L898_g2764 Steinernema monticolum L898_g2764 I 0.887
L898_g8573 Steinernema monticolum L898_g8573 I 0.835
L898_g9866 Steinernema monticolum L898_g9866 I 0.982
L892_g17612 Steinernema scapterisci L892_g17612 I 0.990
L892_g4134 Steinernema scapterisci L892_g4134 I 0.750
L892_g4169 Steinernema scapterisci L892_g4169 I 0.988
L892_g5079 Steinernema scapterisci L892_g5079 I 0.835
L892_g8671 Steinernema scapterisci L892_g8671 I 0.886
SPAL_0000038800 Strongyloides papillosus SPAL_0000038800 I 0.784
SPAL_0000231300 Strongyloides papillosus SPAL_0000231300 I 0.778
SPAL_0000490500 Strongyloides papillosus SPAL_0000490500 I 0.883
SPAL_0000841700 Strongyloides papillosus SPAL_0000841700 I 0.908
SPAL_0001099500 Strongyloides papillosus SPAL_0001099500 I 0.925
SPAL_0001637600 Strongyloides papillosus SPAL_0001637600 I 0.926
SPAL_0001712900 Strongyloides papillosus SPAL_0001712900 I 0.919
SSTP_0000055100 Strongyloides stercoralis SSTP_0000055100 I 0.926
SSTP_0000145700 Strongyloides stercoralis SSTP_0000145700 I 0.911
SSTP_0000408200 Strongyloides stercoralis SSTP_0000408200 I 0.780
SSTP_0000546600 Strongyloides stercoralis SSTP_0000546600 I 0.899
SSTP_0000769100 Strongyloides stercoralis SSTP_0000769100 I 0.925
SSTP_0001081300 Strongyloides stercoralis SSTP_0001081300 I 0.787
SSTP_0001253400 Strongyloides stercoralis SSTP_0001253400 I 0.919
SVE_0146100 Strongyloides venezuelensis SVE_0146100 I 0.919
SVE_0268000 Strongyloides venezuelensis SVE_0268000 I 0.771
SVE_0429000 Strongyloides venezuelensis SVE_0429000 I 0.926
SVE_0858700 Strongyloides venezuelensis SVE_0858700 I 0.925
SVE_1749000 Strongyloides venezuelensis SVE_1749000 I 0.780
SVE_1799100 Strongyloides venezuelensis SVE_1799100 I 0.908
SVE_1951500 Strongyloides venezuelensis SVE_1951500 I 0.883
SMUV_0000475001 Syphacia muris SMUV_0000475001 I 0.841
SMUV_0000657401 Syphacia muris SMUV_0000657401 I 0.754
SMUV_0000708401 Syphacia muris SMUV_0000708401 I 0.885
SMUV_0001072301 Syphacia muris SMUV_0001072301 I 0.858
TELCIR_12561 Teladorsagia circumcincta TELCIR_12561 N 0.798
TCLT_0000256201 Thelazia callipaeda TCLT_0000256201 I 0.945
TCLT_0000399401 Thelazia callipaeda TCLT_0000399401 I 0.885
TCLT_0000461101 Thelazia callipaeda TCLT_0000461101 I 0.912
TCLT_0000612301 Thelazia callipaeda TCLT_0000612301 I 0.800
TCNE_0001076801 Toxocara canis TCNE_0001076801 N 0.808