Thhalv10010002m.g (Eutrema salsugineum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Thhalv10010002m.g T009919_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF021
M06593_2.00 		Arabidopsis thaliana
HNYCDYCDYCDYCRCCGHCD
HGDCGGYGRHGRHGRHGRND		 Dap-seq
OMalley et al.(2016)
AT1G71450_col_a 		0.718 0.800
ERF021
M06594_2.00 		Arabidopsis thaliana
NHNNCRCCGHCDH
DHGDCGGYGNNDN		 Dap-seq
OMalley et al.(2016)
AT1G71450_colamp_a 		0.718 0.800
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10010002m AP2 18 69

Links

Other AP2 family TFs
Other Eutrema salsugineum TFs

118 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo8g027240 Brassica oleracea Bo8g027240 I 0.816
ERF022 Arabidopsis thaliana AT1G33760 I 0.809
Carubv10011715m.g Capsella rubella Carubv10011715m.g I 0.801
Bra028009 Brassica rapa Bra028009 I 0.800
Bostr.3359s0006 Boechera stricta Bostr.3359s0006 I 0.798
Bo6g046850 Brassica oleracea Bo6g046850 I 0.794
Carubv10012215m.g Capsella rubella Carubv10012215m.g I 0.789
evm.TU.supercontig_21.70 Carica papaya evm.TU.supercontig_21.70 I 0.777
Bra010210 Brassica rapa Bra010210 I 0.774
scaffold_103754.1 Arabidopsis lyrata scaffold_103754.1 I 0.774
TCM_036269 Theobroma cacao TCM_036269 I 0.774
Gorai.009G266600 Gossypium raimondii Gorai.009G266600 I 0.770
AMTR_s00099p00039760 Amborella trichopoda AMTR_s00099p00039760 I 0.767
PGSC0003DMG400017813 Solanum tuberosum PGSC0003DMG400017813 I 0.765
Gorai.009G266700 Gossypium raimondii Gorai.009G266700 I 0.765
SapurV1A.1130s0090 Salix purpurea SapurV1A.1130s0090 I 0.764
SapurV1A.1331s0050 Salix purpurea SapurV1A.1331s0050 I 0.764
evm.TU.supercontig_21.69 Carica papaya evm.TU.supercontig_21.69 I 0.762
VIT_18s0001g05850 Vitis vinifera VIT_18s0001g05850 I 0.762
Bo5g086680 Brassica oleracea Bo5g086680 I 0.758
TCM_036270 Theobroma cacao TCM_036270 I 0.756
Pm004269 Prunus mume Pm004269 I 0.755
Pm004272 Prunus mume Pm004272 I 0.755
PRUPE_ppa012354mg Prunus persica PRUPE_ppa012354mg I 0.755
cassava43172.valid.m1 Manihot esculenta cassava43172.valid.m1 I 0.755
GLYMA01G44130 Glycine max GLYMA01G44130 I 0.755
SapurV1A.1331s0040 Salix purpurea SapurV1A.1331s0040 I 0.755
SapurV1A.1130s0100 Salix purpurea SapurV1A.1130s0100 I 0.755
POPTR_0019s10420 Populus trichocarpa POPTR_0019s10420 I 0.755
cassava8552.m1 Manihot esculenta cassava8552.m1 I 0.755
PRUPE_ppa018178mg Prunus persica PRUPE_ppa018178mg I 0.754
Cla012665 Citrullus lanatus Cla012665 I 0.754
PGSC0003DMG400018054 Solanum tuberosum PGSC0003DMG400018054 I 0.752
gene27021-v1.0-hybrid Fragaria vesca gene27021-v1.0-hybrid I 0.751
POPTR_0013s10340 Populus trichocarpa POPTR_0013s10340 I 0.750
Cucsa.237150 Cucumis sativus Cucsa.237150 I 0.749
Ciclev10023857m.g Citrus clementina Ciclev10023857m.g I 0.747
orange1.1g035756m.g Citrus sinensis orange1.1g035756m.g I 0.747
Lus10002953.g Linum usitatissimum Lus10002953.g I 0.746
POPTR_0001s18180 Populus trichocarpa POPTR_0001s18180 I 0.746
MTR_5g008590 Medicago truncatula MTR_5g008590 I 0.746
Solyc11g042580.1 Solanum lycopersicum Solyc11g042580.1 I 0.746
chr2.CM0018.470.nd Lotus japonicus chr2.CM0018.470.nd I 0.746
GLYMA01G44140 Glycine max GLYMA01G44140 I 0.746
GLYMA11G01640 Glycine max GLYMA11G01640 I 0.746
gene27017-v1.0-hybrid Fragaria vesca gene27017-v1.0-hybrid I 0.746
Eucgr.F02974 Eucalyptus grandis Eucgr.F02974 I 0.743
Eucgr.F02976 Eucalyptus grandis Eucgr.F02976 I 0.742
MDP0000151428 Malus domestica MDP0000151428 I 0.742
MDP0000122740 Malus domestica MDP0000122740 I 0.742
MDP0000122739 Malus domestica MDP0000122739 I 0.742
POPTR_0013s10330 Populus trichocarpa POPTR_0013s10330 I 0.740
POPTR_0019s10430 Populus trichocarpa POPTR_0019s10430 I 0.740
SapurV1A.3106s0010 Salix purpurea SapurV1A.3106s0010 I 0.740
SapurV1A.0551s0040 Salix purpurea SapurV1A.0551s0040 I 0.740
Gorai.005G116500 Gossypium raimondii Gorai.005G116500 I 0.739
MDP0000283350 Malus domestica MDP0000283350 I 0.737
Eucgr.F02975 Eucalyptus grandis Eucgr.F02975 I 0.736
chr2.CM0018.610.nd Lotus japonicus chr2.CM0018.610.nd I 0.736
28118.m000034 Ricinus communis 28118.m000034 I 0.734
SapurV1A.0551s0030 Salix purpurea SapurV1A.0551s0030 I 0.734
Cucsa.237170 Cucumis sativus Cucsa.237170 I 0.730
Cla012661 Citrullus lanatus Cla012661 I 0.730
Lus10041052.g Linum usitatissimum Lus10041052.g N 0.729
cassava45911.m1 Manihot esculenta cassava45911.m1 I 0.728
27805.m000021 Ricinus communis 27805.m000021 I 0.724
Bra007975 Brassica rapa Bra007975 I 0.722
Si026882m.g Setaria italica Si026882m.g I 0.721
POPTR_0003s05300 Populus trichocarpa POPTR_0003s05300 I 0.720
Cagra.2418s0001 Capsella grandiflora Cagra.2418s0001 I 0.718
ERF021 Arabidopsis thaliana AT1G71450 D 0.718
Bo2g072910 Brassica oleracea Bo2g072910 I 0.718
Carubv10022349m.g Capsella rubella Carubv10022349m.g I 0.718
fgenesh2_kg.2__1406__AT1G71450.1 Arabidopsis lyrata fgenesh2_kg.2__1406__AT1G71450.1 I 0.718
Solyc11g042560.1 Solanum lycopersicum Solyc11g042560.1 I 0.716
Lus10006173.g Linum usitatissimum Lus10006173.g I 0.714
Thhalv10019659m.g Eutrema salsugineum Thhalv10019659m.g I 0.714
AC198403.3_FG001 Zea mays AC198403.3_FG001 I 0.714
Lus10003513.g Linum usitatissimum Lus10003513.g N 0.710
MTR_5g008550 Medicago truncatula MTR_5g008550 I 0.709
Lus10041050.g Linum usitatissimum Lus10041050.g I 0.709
Bra016136 Brassica rapa Bra016136 I 0.708
Ciclev10024063m.g Citrus clementina Ciclev10024063m.g I 0.708
orange1.1g046901m.g Citrus sinensis orange1.1g046901m.g I 0.708
GSMUA_Achr2G20760_001 Musa acuminata GSMUA_Achr2G20760_001 I 0.704
VIT_18s0001g05890 Vitis vinifera VIT_18s0001g05890 I 0.702
BRADI4G21265 Brachypodium distachyon BRADI4G21265 I 0.702
LPERR11G07100 Leersia perrieri LPERR11G07100 I 0.702
OGLUM11G07800 Oryza glumaepatula OGLUM11G07800 I 0.701
BGIOSGA034227 Oryza indica BGIOSGA034227 I 0.701
ONIVA11G08160 Oryza nivara ONIVA11G08160 I 0.701
Pavir.J26137 Panicum virgatum Pavir.J26137 I 0.701
OB11G16300 Oryza brachyantha OB11G16300 I 0.701
OMERI11G06840 Oryza meridionalis OMERI11G06840 I 0.701
Sb05g007135 Sorghum bicolor Sb05g007135 I 0.701
OPUNC11G07750 Oryza punctata OPUNC11G07750 I 0.701
ORGLA11G0070000 Oryza glaberrima ORGLA11G0070000 I 0.701
Bo6g113020 Brassica oleracea Bo6g113020 I 0.701
Pavir.J22217 Panicum virgatum Pavir.J22217 I 0.701
ORUFI11G08240 Oryza rufipogon ORUFI11G08240 I 0.701
OS11G0242300 Oryza sativa OS11G0242300 I 0.701
MLOC_55144 Hordeum vulgare MLOC_55144 I 0.697
Traes_4BS_DD5E68382 Triticum aestivum Traes_4BS_DD5E68382 I 0.697
Traes_4DS_97AC77E13 Triticum aestivum Traes_4DS_97AC77E13 I 0.697
F775_17299 Aegilops tauschii F775_17299 I 0.697
TRIUR3_32331 Triticum urartu TRIUR3_32331 I 0.697
Traes_4AL_D2D7703821 Triticum aestivum Traes_4AL_D2D7703821 I 0.697
Ca_15064 Cicer arietinum Ca_15064 I 0.696
GSMUA_Achr11G12650_001 Musa acuminata GSMUA_Achr11G12650_001 N 0.695
OMERI04G12360 Oryza meridionalis OMERI04G12360 N 0.691
ONIVA04G11950 Oryza nivara ONIVA04G11950 N 0.691
ORGLA04G0108200 Oryza glaberrima ORGLA04G0108200 N 0.691
ORUFI04G15010 Oryza rufipogon ORUFI04G15010 N 0.691
LPERR04G10650 Leersia perrieri LPERR04G10650 N 0.690
GSMUA_Achr8G16250_001 Musa acuminata GSMUA_Achr8G16250_001 I 0.688
Bo6g094210 Brassica oleracea Bo6g094210 I 0.678
Bra003924 Brassica rapa Bra003924 I 0.678
BRADI3G45997 Brachypodium distachyon BRADI3G45997 N 0.677