MDP0000283350 (Malus domestica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 MDP0000283350 T009071_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF021
M06593_2.00 		Arabidopsis thaliana
HNYCDYCDYCDYCRCCGHCD
HGDCGGYGRHGRHGRHGRND		 Dap-seq
OMalley et al.(2016)
AT1G71450_col_a 		0.787 0.920
ERF021
M06594_2.00 		Arabidopsis thaliana
NHNNCRCCGHCDH
DHGDCGGYGNNDN		 Dap-seq
OMalley et al.(2016)
AT1G71450_colamp_a 		0.787 0.920
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000283350 AP2 16 67

Links

Other AP2 family TFs
Other Malus domestica TFs

122 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
chr2.CM0018.470.nd Lotus japonicus chr2.CM0018.470.nd I 0.816
GLYMA11G01640 Glycine max GLYMA11G01640 I 0.816
GLYMA01G44140 Glycine max GLYMA01G44140 I 0.816
MTR_5g008590 Medicago truncatula MTR_5g008590 I 0.816
gene27021-v1.0-hybrid Fragaria vesca gene27021-v1.0-hybrid I 0.813
Pm004269 Prunus mume Pm004269 I 0.809
PRUPE_ppa012354mg Prunus persica PRUPE_ppa012354mg I 0.809
Eucgr.F02974 Eucalyptus grandis Eucgr.F02974 I 0.806
Ciclev10023857m.g Citrus clementina Ciclev10023857m.g I 0.801
orange1.1g035756m.g Citrus sinensis orange1.1g035756m.g I 0.801
Bra016136 Brassica rapa Bra016136 I 0.800
Gorai.009G266600 Gossypium raimondii Gorai.009G266600 I 0.794
Bo6g113020 Brassica oleracea Bo6g113020 I 0.792
Bo2g072910 Brassica oleracea Bo2g072910 I 0.787
fgenesh2_kg.2__1406__AT1G71450.1 Arabidopsis lyrata fgenesh2_kg.2__1406__AT1G71450.1 I 0.787
ERF021 Arabidopsis thaliana AT1G71450 D 0.787
Carubv10022349m.g Capsella rubella Carubv10022349m.g I 0.787
Cagra.2418s0001 Capsella grandiflora Cagra.2418s0001 I 0.787
evm.TU.supercontig_21.69 Carica papaya evm.TU.supercontig_21.69 I 0.786
Thhalv10019659m.g Eutrema salsugineum Thhalv10019659m.g I 0.784
TCM_036269 Theobroma cacao TCM_036269 I 0.781
SapurV1A.1130s0100 Salix purpurea SapurV1A.1130s0100 I 0.779
cassava8552.m1 Manihot esculenta cassava8552.m1 I 0.779
Eucgr.F02975 Eucalyptus grandis Eucgr.F02975 I 0.779
SapurV1A.1331s0040 Salix purpurea SapurV1A.1331s0040 I 0.779
cassava43172.valid.m1 Manihot esculenta cassava43172.valid.m1 I 0.779
POPTR_0019s10420 Populus trichocarpa POPTR_0019s10420 I 0.779
evm.TU.supercontig_21.70 Carica papaya evm.TU.supercontig_21.70 I 0.778
Cla012665 Citrullus lanatus Cla012665 I 0.778
28118.m000034 Ricinus communis 28118.m000034 I 0.777
SapurV1A.0551s0030 Salix purpurea SapurV1A.0551s0030 I 0.777
POPTR_0013s10340 Populus trichocarpa POPTR_0013s10340 I 0.774
Cucsa.237150 Cucumis sativus Cucsa.237150 I 0.773
Bra007975 Brassica rapa Bra007975 I 0.772
Lus10006173.g Linum usitatissimum Lus10006173.g I 0.772
POPTR_0001s18180 Populus trichocarpa POPTR_0001s18180 I 0.770
Lus10041050.g Linum usitatissimum Lus10041050.g I 0.766
Gorai.009G266700 Gossypium raimondii Gorai.009G266700 I 0.764
PGSC0003DMG400018054 Solanum tuberosum PGSC0003DMG400018054 I 0.763
Gorai.005G116500 Gossypium raimondii Gorai.005G116500 I 0.763
TCM_036270 Theobroma cacao TCM_036270 I 0.761
Carubv10012215m.g Capsella rubella Carubv10012215m.g I 0.759
Solyc11g042580.1 Solanum lycopersicum Solyc11g042580.1 I 0.757
Ciclev10024063m.g Citrus clementina Ciclev10024063m.g I 0.753
orange1.1g046901m.g Citrus sinensis orange1.1g046901m.g I 0.753
VIT_18s0001g05890 Vitis vinifera VIT_18s0001g05890 I 0.750
Bra003924 Brassica rapa Bra003924 I 0.748
Bo6g094210 Brassica oleracea Bo6g094210 I 0.748
VIT_18s0001g05850 Vitis vinifera VIT_18s0001g05850 I 0.748
PGSC0003DMG400017813 Solanum tuberosum PGSC0003DMG400017813 I 0.744
Bostr.10273s0203 Boechera stricta Bostr.10273s0203 I 0.743
Bo8g027240 Brassica oleracea Bo8g027240 I 0.741
Solyc11g042560.1 Solanum lycopersicum Solyc11g042560.1 I 0.740
Pm004272 Prunus mume Pm004272 I 0.738
PRUPE_ppa018178mg Prunus persica PRUPE_ppa018178mg I 0.738
Bostr.3359s0006 Boechera stricta Bostr.3359s0006 I 0.738
chr2.CM0018.610.nd Lotus japonicus chr2.CM0018.610.nd I 0.738
Thhalv10010002m.g Eutrema salsugineum Thhalv10010002m.g I 0.737
ERF022 Arabidopsis thaliana AT1G33760 I 0.736
Bra010210 Brassica rapa Bra010210 I 0.736
Bo5g086680 Brassica oleracea Bo5g086680 I 0.736
27805.m000021 Ricinus communis 27805.m000021 I 0.734
gene27017-v1.0-hybrid Fragaria vesca gene27017-v1.0-hybrid I 0.730
MDP0000122739 Malus domestica MDP0000122739 I 0.726
MDP0000122740 Malus domestica MDP0000122740 I 0.726
MDP0000151428 Malus domestica MDP0000151428 I 0.726
Si026882m.g Setaria italica Si026882m.g I 0.725
Cla012661 Citrullus lanatus Cla012661 I 0.723
Cucsa.237170 Cucumis sativus Cucsa.237170 I 0.723
GLYMA01G44130 Glycine max GLYMA01G44130 I 0.722
SapurV1A.1130s0090 Salix purpurea SapurV1A.1130s0090 I 0.719
SapurV1A.1331s0050 Salix purpurea SapurV1A.1331s0050 I 0.719
POPTR_0013s10330 Populus trichocarpa POPTR_0013s10330 I 0.718
POPTR_0019s10430 Populus trichocarpa POPTR_0019s10430 I 0.718
SapurV1A.3106s0010 Salix purpurea SapurV1A.3106s0010 I 0.718
SapurV1A.0551s0040 Salix purpurea SapurV1A.0551s0040 I 0.718
Carubv10011715m.g Capsella rubella Carubv10011715m.g I 0.715
Bra028009 Brassica rapa Bra028009 I 0.715
AMTR_s00099p00039760 Amborella trichopoda AMTR_s00099p00039760 I 0.715
Bo6g046850 Brassica oleracea Bo6g046850 I 0.709
Lus10002953.g Linum usitatissimum Lus10002953.g I 0.708
POPTR_0003s05300 Populus trichocarpa POPTR_0003s05300 I 0.707
cassava45911.m1 Manihot esculenta cassava45911.m1 I 0.707
OB11G16300 Oryza brachyantha OB11G16300 I 0.705
LPERR11G07100 Leersia perrieri LPERR11G07100 I 0.705
BGIOSGA034227 Oryza indica BGIOSGA034227 I 0.704
OGLUM11G07800 Oryza glumaepatula OGLUM11G07800 I 0.704
OPUNC11G07750 Oryza punctata OPUNC11G07750 I 0.704
ORUFI11G08240 Oryza rufipogon ORUFI11G08240 I 0.704
Pavir.J26137 Panicum virgatum Pavir.J26137 I 0.704
Sb05g007135 Sorghum bicolor Sb05g007135 I 0.704
OS11G0242300 Oryza sativa OS11G0242300 I 0.704
BRADI4G21265 Brachypodium distachyon BRADI4G21265 I 0.704
ORGLA11G0070000 Oryza glaberrima ORGLA11G0070000 I 0.704
OMERI11G06840 Oryza meridionalis OMERI11G06840 I 0.704
ONIVA11G08160 Oryza nivara ONIVA11G08160 I 0.704
Pavir.J22217 Panicum virgatum Pavir.J22217 I 0.704
AC198403.3_FG001 Zea mays AC198403.3_FG001 I 0.704
GSMUA_Achr2G20760_001 Musa acuminata GSMUA_Achr2G20760_001 I 0.704
Traes_2BL_9CD6E043A Triticum aestivum Traes_2BL_9CD6E043A I 0.703
AMTR_s00021p00223240 Amborella trichopoda AMTR_s00021p00223240 I 0.703
scaffold_103754.1 Arabidopsis lyrata scaffold_103754.1 I 0.701
TRIUR3_32168 Triticum urartu TRIUR3_32168 I 0.701
F775_17299 Aegilops tauschii F775_17299 I 0.699
MLOC_55144 Hordeum vulgare MLOC_55144 I 0.699
Traes_4BS_DD5E68382 Triticum aestivum Traes_4BS_DD5E68382 I 0.699
Traes_4AL_D2D7703821 Triticum aestivum Traes_4AL_D2D7703821 I 0.699
Traes_4DS_97AC77E13 Triticum aestivum Traes_4DS_97AC77E13 I 0.699
TRIUR3_32331 Triticum urartu TRIUR3_32331 I 0.699
Eucgr.F02976 Eucalyptus grandis Eucgr.F02976 I 0.698
GSMUA_Achr11G12650_001 Musa acuminata GSMUA_Achr11G12650_001 N 0.695
MTR_5g008550 Medicago truncatula MTR_5g008550 I 0.693
Lus10041052.g Linum usitatissimum Lus10041052.g N 0.691
VIT_15s0046g00310 Vitis vinifera VIT_15s0046g00310 I 0.687
GSMUA_Achr8G16250_001 Musa acuminata GSMUA_Achr8G16250_001 I 0.687
Ca_15064 Cicer arietinum Ca_15064 I 0.682
LPERR04G10650 Leersia perrieri LPERR04G10650 N 0.681
SapurV1A.0601s0170 Salix purpurea SapurV1A.0601s0170 N 0.680
ORUFI04G15010 Oryza rufipogon ORUFI04G15010 N 0.679
ORGLA04G0108200 Oryza glaberrima ORGLA04G0108200 N 0.679
ONIVA04G11950 Oryza nivara ONIVA04G11950 N 0.679
OMERI04G12360 Oryza meridionalis OMERI04G12360 N 0.679