Gorai.009G266600 (Gossypium raimondii)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Gorai.009G266600 T008657_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF021
M06593_2.00 		Arabidopsis thaliana
HNYCDYCDYCDYCRCCGHCD
HGDCGGYGRHGRHGRHGRND		 Dap-seq
OMalley et al.(2016)
AT1G71450_col_a 		0.775 0.900
ERF021
M06594_2.00 		Arabidopsis thaliana
NHNNCRCCGHCDH
DHGDCGGYGNNDN		 Dap-seq
OMalley et al.(2016)
AT1G71450_colamp_a 		0.775 0.900
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.009G266600.1 AP2 15 66

Links

Other AP2 family TFs
Other Gossypium raimondii TFs

118 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
evm.TU.supercontig_21.69 Carica papaya evm.TU.supercontig_21.69 I 0.820
Pm004269 Prunus mume Pm004269 I 0.813
PRUPE_ppa012354mg Prunus persica PRUPE_ppa012354mg I 0.813
SapurV1A.1331s0040 Salix purpurea SapurV1A.1331s0040 I 0.813
SapurV1A.1130s0100 Salix purpurea SapurV1A.1130s0100 I 0.813
cassava43172.valid.m1 Manihot esculenta cassava43172.valid.m1 I 0.813
POPTR_0019s10420 Populus trichocarpa POPTR_0019s10420 I 0.813
cassava8552.m1 Manihot esculenta cassava8552.m1 I 0.813
Cla012665 Citrullus lanatus Cla012665 I 0.812
gene27021-v1.0-hybrid Fragaria vesca gene27021-v1.0-hybrid I 0.809
POPTR_0013s10340 Populus trichocarpa POPTR_0013s10340 I 0.808
Cucsa.237150 Cucumis sativus Cucsa.237150 I 0.806
orange1.1g035756m.g Citrus sinensis orange1.1g035756m.g I 0.805
Ciclev10023857m.g Citrus clementina Ciclev10023857m.g I 0.805
GLYMA01G44140 Glycine max GLYMA01G44140 I 0.804
MTR_5g008590 Medicago truncatula MTR_5g008590 I 0.804
POPTR_0001s18180 Populus trichocarpa POPTR_0001s18180 I 0.804
GLYMA11G01640 Glycine max GLYMA11G01640 I 0.804
chr2.CM0018.470.nd Lotus japonicus chr2.CM0018.470.nd I 0.804
Eucgr.F02974 Eucalyptus grandis Eucgr.F02974 I 0.801
TCM_036269 Theobroma cacao TCM_036269 I 0.799
Gorai.009G266700 Gossypium raimondii Gorai.009G266700 I 0.798
Gorai.005G116500 Gossypium raimondii Gorai.005G116500 I 0.797
evm.TU.supercontig_21.70 Carica papaya evm.TU.supercontig_21.70 I 0.796
Eucgr.F02975 Eucalyptus grandis Eucgr.F02975 I 0.794
MDP0000283350 Malus domestica MDP0000283350 I 0.794
28118.m000034 Ricinus communis 28118.m000034 I 0.792
SapurV1A.0551s0030 Salix purpurea SapurV1A.0551s0030 I 0.792
TCM_036270 Theobroma cacao TCM_036270 I 0.788
VIT_18s0001g05850 Vitis vinifera VIT_18s0001g05850 I 0.781
Solyc11g042580.1 Solanum lycopersicum Solyc11g042580.1 I 0.778
ERF021 Arabidopsis thaliana AT1G71450 D 0.775
Cagra.2418s0001 Capsella grandiflora Cagra.2418s0001 I 0.775
Bo8g027240 Brassica oleracea Bo8g027240 I 0.775
fgenesh2_kg.2__1406__AT1G71450.1 Arabidopsis lyrata fgenesh2_kg.2__1406__AT1G71450.1 I 0.775
Bo2g072910 Brassica oleracea Bo2g072910 I 0.775
Carubv10022349m.g Capsella rubella Carubv10022349m.g I 0.775
Thhalv10019659m.g Eutrema salsugineum Thhalv10019659m.g I 0.772
PGSC0003DMG400018054 Solanum tuberosum PGSC0003DMG400018054 I 0.771
Thhalv10010002m.g Eutrema salsugineum Thhalv10010002m.g I 0.770
Bra010210 Brassica rapa Bra010210 I 0.769
ERF022 Arabidopsis thaliana AT1G33760 I 0.769
Bra016136 Brassica rapa Bra016136 I 0.766
PGSC0003DMG400017813 Solanum tuberosum PGSC0003DMG400017813 I 0.765
Carubv10012215m.g Capsella rubella Carubv10012215m.g I 0.763
Bra007975 Brassica rapa Bra007975 I 0.760
Bo6g113020 Brassica oleracea Bo6g113020 I 0.759
Pm004272 Prunus mume Pm004272 I 0.759
PRUPE_ppa018178mg Prunus persica PRUPE_ppa018178mg I 0.759
Lus10006173.g Linum usitatissimum Lus10006173.g I 0.757
Bostr.3359s0006 Boechera stricta Bostr.3359s0006 I 0.757
chr2.CM0018.610.nd Lotus japonicus chr2.CM0018.610.nd I 0.756
GLYMA01G44130 Glycine max GLYMA01G44130 I 0.755
27805.m000021 Ricinus communis 27805.m000021 I 0.755
Bo5g086680 Brassica oleracea Bo5g086680 I 0.754
Lus10041050.g Linum usitatissimum Lus10041050.g I 0.751
gene27017-v1.0-hybrid Fragaria vesca gene27017-v1.0-hybrid I 0.751
Cla012661 Citrullus lanatus Cla012661 I 0.750
Cucsa.237170 Cucumis sativus Cucsa.237170 I 0.750
Carubv10011715m.g Capsella rubella Carubv10011715m.g I 0.749
Bra028009 Brassica rapa Bra028009 I 0.749
MDP0000151428 Malus domestica MDP0000151428 I 0.747
MDP0000122740 Malus domestica MDP0000122740 I 0.747
MDP0000122739 Malus domestica MDP0000122739 I 0.747
Si026882m.g Setaria italica Si026882m.g I 0.746
VIT_18s0001g05890 Vitis vinifera VIT_18s0001g05890 I 0.745
Bo6g046850 Brassica oleracea Bo6g046850 I 0.743
SapurV1A.1130s0090 Salix purpurea SapurV1A.1130s0090 I 0.741
Ciclev10024063m.g Citrus clementina Ciclev10024063m.g I 0.741
orange1.1g046901m.g Citrus sinensis orange1.1g046901m.g I 0.741
SapurV1A.1331s0050 Salix purpurea SapurV1A.1331s0050 I 0.741
POPTR_0019s10430 Populus trichocarpa POPTR_0019s10430 I 0.739
POPTR_0013s10330 Populus trichocarpa POPTR_0013s10330 I 0.739
SapurV1A.0551s0040 Salix purpurea SapurV1A.0551s0040 I 0.739
SapurV1A.3106s0010 Salix purpurea SapurV1A.3106s0010 I 0.739
AC198403.3_FG001 Zea mays AC198403.3_FG001 I 0.738
Solyc11g042560.1 Solanum lycopersicum Solyc11g042560.1 I 0.736
Bra003924 Brassica rapa Bra003924 I 0.736
Bo6g094210 Brassica oleracea Bo6g094210 I 0.736
scaffold_103754.1 Arabidopsis lyrata scaffold_103754.1 I 0.734
AMTR_s00099p00039760 Amborella trichopoda AMTR_s00099p00039760 I 0.733
Bostr.10273s0203 Boechera stricta Bostr.10273s0203 I 0.731
Lus10002953.g Linum usitatissimum Lus10002953.g I 0.730
cassava45911.m1 Manihot esculenta cassava45911.m1 I 0.728
MTR_5g008550 Medicago truncatula MTR_5g008550 I 0.726
OB11G16300 Oryza brachyantha OB11G16300 I 0.726
BRADI4G21265 Brachypodium distachyon BRADI4G21265 I 0.726
BGIOSGA034227 Oryza indica BGIOSGA034227 I 0.726
OGLUM11G07800 Oryza glumaepatula OGLUM11G07800 I 0.726
LPERR11G07100 Leersia perrieri LPERR11G07100 I 0.726
ONIVA11G08160 Oryza nivara ONIVA11G08160 I 0.726
Sb05g007135 Sorghum bicolor Sb05g007135 I 0.726
Pavir.J26137 Panicum virgatum Pavir.J26137 I 0.726
Pavir.J22217 Panicum virgatum Pavir.J22217 I 0.726
OMERI11G06840 Oryza meridionalis OMERI11G06840 I 0.726
OS11G0242300 Oryza sativa OS11G0242300 I 0.726
OPUNC11G07750 Oryza punctata OPUNC11G07750 I 0.726
ORGLA11G0070000 Oryza glaberrima ORGLA11G0070000 I 0.726
ORUFI11G08240 Oryza rufipogon ORUFI11G08240 I 0.726
GSMUA_Achr2G20760_001 Musa acuminata GSMUA_Achr2G20760_001 I 0.725
Traes_4DS_97AC77E13 Triticum aestivum Traes_4DS_97AC77E13 I 0.720
Traes_4AL_D2D7703821 Triticum aestivum Traes_4AL_D2D7703821 I 0.720
MLOC_55144 Hordeum vulgare MLOC_55144 I 0.720
F775_17299 Aegilops tauschii F775_17299 I 0.720
TRIUR3_32331 Triticum urartu TRIUR3_32331 I 0.720
Traes_4BS_DD5E68382 Triticum aestivum Traes_4BS_DD5E68382 I 0.720
Eucgr.F02976 Eucalyptus grandis Eucgr.F02976 I 0.719
POPTR_0003s05300 Populus trichocarpa POPTR_0003s05300 I 0.718
GSMUA_Achr11G12650_001 Musa acuminata GSMUA_Achr11G12650_001 N 0.716
Ca_15064 Cicer arietinum Ca_15064 I 0.716
SapurV1A.0601s0170 Salix purpurea SapurV1A.0601s0170 N 0.713
Lus10041052.g Linum usitatissimum Lus10041052.g N 0.712
GSMUA_Achr8G16250_001 Musa acuminata GSMUA_Achr8G16250_001 I 0.708
AMTR_s00021p00223240 Amborella trichopoda AMTR_s00021p00223240 I 0.699
Lus10003513.g Linum usitatissimum Lus10003513.g N 0.694
Traes_2BL_9CD6E043A Triticum aestivum Traes_2BL_9CD6E043A I 0.694
TRIUR3_32168 Triticum urartu TRIUR3_32168 I 0.693
VIT_15s0046g00310 Vitis vinifera VIT_15s0046g00310 I 0.683