PRUPE_ppa017589mg (Prunus persica)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 PRUPE_ppa017589mg T245925_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LBD19
M06960_2.00 		Arabidopsis thaliana
CCKKAAAWHMMGSND
HNSCKKDWTTTMMGG		 Dap-seq
OMalley et al.(2016)
LBD19_col_a 		0.838 0.838
LBD19
M06961_2.00 		Arabidopsis thaliana
WWYCCGG
CCGGRWW		 Dap-seq
OMalley et al.(2016)
LBD19_colamp_a 		0.838 0.838
LBD18
M06962_2.00 		Arabidopsis thaliana
SCGGRRAWHVHGSMRNNDN
NHNNYKSCDBDWTYYCCGS		 Dap-seq
OMalley et al.(2016)
LBD18_col_a 		0.818 0.818
LBD18
M06963_2.00 		Arabidopsis thaliana
CDBDWTTTMHGSHRN
NYDSCDKAAAWHVHG		 Dap-seq
OMalley et al.(2016)
LBD18_colamp_a 		0.818 0.818
LBD30
M01066_2.00 		Arabidopsis thaliana
BVWWWHVNGG
CCNBDWWWBV		 PBM
Sullivan et al.(2014)
pTH7467 		0.788 0.788
LBD30
M01067_2.00 		Arabidopsis thaliana
VWWWNVNGGD
HCCNBNWWWB		 PBM
Sullivan et al.(2014)
pTH7616 		0.788 0.788
LBD16
M00870_2.00 		Arabidopsis thaliana
DNHHYVCGG
CCGBRDDNH		 PBM
Franco-Zorrilla et al.(2014)
LBD16 		0.717 0.717
LBD16
M06958_2.00 		Arabidopsis thaliana
SCGGAAAWNVCGSMR
YKSCGBNWTTTCCGS		 Dap-seq
OMalley et al.(2016)
ASL18_col_a 		0.717 0.717
LBD16
M06959_2.00 		Arabidopsis thaliana
SCDBDWTTYVCGSHDN
NHDSCGBRAAWHVHGS		 Dap-seq
OMalley et al.(2016)
ASL18_colamp_a 		0.717 0.717
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EMJ22074 LOB 24 123

Links

Other LOB family TFs
Other Prunus persica TFs

259 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pm017935 Prunus mume Pm017935 I 0.990
MDP0000429067 Malus domestica MDP0000429067 I 0.980
gene19356-v1.0-hybrid Fragaria vesca gene19356-v1.0-hybrid I 0.949
PK25573.1 Cannabis sativa PK25573.1 I 0.949
cassava28672.m1 Manihot esculenta cassava28672.m1 I 0.929
Lus10009298.g Linum usitatissimum Lus10009298.g I 0.919
Cla007069 Citrullus lanatus Cla007069 I 0.919
evm.TU.supercontig_18.117 Carica papaya evm.TU.supercontig_18.117 I 0.919
cassava40137.m1 Manihot esculenta cassava40137.m1 I 0.919
TCM_005497 Theobroma cacao TCM_005497 I 0.919
30174.m008897 Ricinus communis 30174.m008897 I 0.919
mgf020735m Mimulus guttatus mgf020735m I 0.909
POPTR_0014s06580 Populus trichocarpa POPTR_0014s06580 I 0.909
SapurV1A.0532s0200 Salix purpurea SapurV1A.0532s0200 I 0.899
GLYMA01G34523 Glycine max GLYMA01G34523 I 0.899
SapurV1A.0024s0790 Salix purpurea SapurV1A.0024s0790 I 0.899
Gorai.007G091600 Gossypium raimondii Gorai.007G091600 I 0.899
Aquca_013_00580 Aquilegia coerulea Aquca_013_00580 I 0.889
GLYMA03G02631 Glycine max GLYMA03G02631 I 0.889
MTR_8g036105 Medicago truncatula MTR_8g036105 I 0.889
VIT_15s0048g00840 Vitis vinifera VIT_15s0048g00840 I 0.879
GRMZM2G150594 Zea mays GRMZM2G150594 I 0.879
30174.m008898 Ricinus communis 30174.m008898 I 0.869
SapurV1A.0532s0190 Salix purpurea SapurV1A.0532s0190 I 0.869
Sb01g041130 Sorghum bicolor Sb01g041130 I 0.869
GSMUA_Achr5G11330_001 Musa acuminata GSMUA_Achr5G11330_001 I 0.869
GRMZM2G110913 Zea mays GRMZM2G110913 I 0.869
cassava28659.m1 Manihot esculenta cassava28659.m1 I 0.869
Ca_19598 Cicer arietinum Ca_19598 I 0.869
cassava36912.valid.m1 Manihot esculenta cassava36912.valid.m1 I 0.869
Ciclev10021992m.g Citrus clementina Ciclev10021992m.g I 0.869
Pavir.J34872 Panicum virgatum Pavir.J34872 I 0.869
orange1.1g036534m.g Citrus sinensis orange1.1g036534m.g I 0.869
OPUNC03G10080 Oryza punctata OPUNC03G10080 I 0.859
OMERI03G09680 Oryza meridionalis OMERI03G09680 I 0.859
ORGLA03G0100400 Oryza glaberrima ORGLA03G0100400 I 0.859
ORUFI03G10670 Oryza rufipogon ORUFI03G10670 I 0.859
OS03G0246900 Oryza sativa OS03G0246900 I 0.859
OGLUM03G10340 Oryza glumaepatula OGLUM03G10340 I 0.859
OBART03G10450 Oryza barthii OBART03G10450 I 0.859
Gorai.004G161100 Gossypium raimondii Gorai.004G161100 I 0.859
MTR_7g075230 Medicago truncatula MTR_7g075230 I 0.859
GSMUA_Achr2G11240_001 Musa acuminata GSMUA_Achr2G11240_001 I 0.859
Gorai.008G114400 Gossypium raimondii Gorai.008G114400 I 0.859
GSMUA_Achr1G02520_001 Musa acuminata GSMUA_Achr1G02520_001 I 0.859
Eucgr.E01415 Eucalyptus grandis Eucgr.E01415 I 0.859
Pm017936 Prunus mume Pm017936 I 0.859
Cucsa.362840 Cucumis sativus Cucsa.362840 I 0.859
BGIOSGA011118 Oryza indica BGIOSGA011118 I 0.859
Cla007068 Citrullus lanatus Cla007068 I 0.859
AMTR_s00041p00044170 Amborella trichopoda AMTR_s00041p00044170 I 0.859
PRUPE_ppa010383mg Prunus persica PRUPE_ppa010383mg I 0.859
Eucgr.E01414 Eucalyptus grandis Eucgr.E01414 I 0.859
LPERR03G09330 Leersia perrieri LPERR03G09330 I 0.859
BRADI1G68170 Brachypodium distachyon BRADI1G68170 I 0.859
MLOC_55239 Hordeum vulgare MLOC_55239 I 0.848
Gorai.008G114300 Gossypium raimondii Gorai.008G114300 I 0.848
LBD30 Vitis vinifera VIT_15s0048g00830 I 0.848
Ciclev10022291m.g Citrus clementina Ciclev10022291m.g I 0.848
Traes_4BL_3FB579782 Triticum aestivum Traes_4BL_3FB579782 I 0.848
Traes_4DL_A2012EA68 Triticum aestivum Traes_4DL_A2012EA68 I 0.848
Pavir.Ia02614 Panicum virgatum Pavir.Ia02614 I 0.848
Traes_4AS_5971FF832 Triticum aestivum Traes_4AS_5971FF832 I 0.848
Bostr.25993s0234 Boechera stricta Bostr.25993s0234 I 0.838
Pavir.Ib02517 Panicum virgatum Pavir.Ib02517 I 0.838
Aquca_013_00578 Aquilegia coerulea Aquca_013_00578 I 0.838
Solyc01g091400.2 Solanum lycopersicum Solyc01g091400.2 I 0.838
SapurV1A.0024s0780 Salix purpurea SapurV1A.0024s0780 I 0.838
GRMZM2G076327 Zea mays GRMZM2G076327 I 0.838
LBD19 Arabidopsis thaliana AT2G45410 D 0.838
Carubv10025477m.g Capsella rubella Carubv10025477m.g I 0.828
GSMUA_AchrUn_randomG10470_001 Musa acuminata GSMUA_AchrUn_randomG10470_001 I 0.828
Bra040311 Brassica rapa Bra040311 I 0.828
Solyc01g091420.1 Solanum lycopersicum Solyc01g091420.1 I 0.828
Bo4g195520 Brassica oleracea Bo4g195520 I 0.828
GLYMA03G02620 Glycine max GLYMA03G02620 I 0.828
Cagra.0698s0022 Capsella grandiflora Cagra.0698s0022 I 0.828
Cagra.1261s0013 Capsella grandiflora Cagra.1261s0013 I 0.828
GLYMA09G40500 Glycine max GLYMA09G40500 I 0.818
POPTR_0002s14980 Populus trichocarpa POPTR_0002s14980 I 0.818
Carubv10025050m.g Capsella rubella Carubv10025050m.g I 0.818
Carubv10002489m.g Capsella rubella Carubv10002489m.g I 0.818
GLYMA01G34540 Glycine max GLYMA01G34540 I 0.818
LBD18 Arabidopsis thaliana AT2G45420 D 0.818
Bo4g024620 Brassica oleracea Bo4g024620 I 0.818
Bostr.14547s0030 Boechera stricta Bostr.14547s0030 I 0.818
Cagra.0698s0021 Capsella grandiflora Cagra.0698s0021 I 0.818
Al_scaffold_0004_3226 Arabidopsis lyrata Al_scaffold_0004_3226 I 0.818
Bostr.25993s0233 Boechera stricta Bostr.25993s0233 I 0.818
LBD18 Arabidopsis lyrata fgenesh2_kg.4__2737__AT2G45420.1 I 0.818
chr3.LjT44N20.90.nd Lotus japonicus chr3.LjT44N20.90.nd I 0.818
Thhalv10001791m.g Eutrema salsugineum Thhalv10001791m.g I 0.818
Bra004910 Brassica rapa Bra004910 I 0.808
gene19355-v1.0-hybrid Fragaria vesca gene19355-v1.0-hybrid I 0.808
Cucsa.362830 Cucumis sativus Cucsa.362830 I 0.808
Bra040312 Brassica rapa Bra040312 I 0.808
Thhalv10028924m.g Eutrema salsugineum Thhalv10028924m.g I 0.808
Pavir.Ia03917 Panicum virgatum Pavir.Ia03917 I 0.808
OB10G12360 Oryza brachyantha OB10G12360 I 0.808
LjSGA_002536.2 Lotus japonicus LjSGA_002536.2 I 0.798
BRADI3G22510 Brachypodium distachyon BRADI3G22510 I 0.798
Thhalv10001778m.g Eutrema salsugineum Thhalv10001778m.g I 0.798
Bra037323 Brassica rapa Bra037323 I 0.798
MTR_8g036085 Medicago truncatula MTR_8g036085 I 0.798
Bo9g002160 Brassica oleracea Bo9g002160 I 0.798
LBD30 Arabidopsis lyrata fgenesh2_kg.6__3680__AT4G00220.1 I 0.788
Bra008514 Brassica rapa Bra008514 I 0.788
BGIOSGA032254 Oryza indica BGIOSGA032254 I 0.788
Sb01g024400 Sorghum bicolor Sb01g024400 I 0.788
Bo4g024610 Brassica oleracea Bo4g024610 I 0.788
Bo2g097560 Brassica oleracea Bo2g097560 I 0.788
LBD31 Arabidopsis thaliana AT4G00210 I 0.788
Bostr.14547s0031 Boechera stricta Bostr.14547s0031 I 0.788
LBD30 Arabidopsis thaliana AT4G00220 D 0.788
OGLUM10G03230 Oryza glumaepatula OGLUM10G03230 I 0.788
GLYMA18G45320 Glycine max GLYMA18G45320 I 0.788
Thhalv10028937m.g Eutrema salsugineum Thhalv10028937m.g I 0.788
Cagra.1261s0014 Capsella grandiflora Cagra.1261s0014 I 0.788
OPUNC10G02630 Oryza punctata OPUNC10G02630 I 0.788
ONIVA10G03250 Oryza nivara ONIVA10G03250 I 0.788
Carubv10001875m.g Capsella rubella Carubv10001875m.g I 0.788
ORGLA10G0025200 Oryza glaberrima ORGLA10G0025200 I 0.788
OS10G0162600 Oryza sativa OS10G0162600 I 0.788
ORUFI10G03180 Oryza rufipogon ORUFI10G03180 I 0.788
Bra004908 Brassica rapa Bra004908 I 0.778
chr1.CM1255.40.nc Lotus japonicus chr1.CM1255.40.nc I 0.778
LBD20 Vitis vinifera VIT_08s0056g01650 I 0.768
Eucgr.K01522 Eucalyptus grandis Eucgr.K01522 I 0.768
Ca_20428 Cicer arietinum Ca_20428 I 0.768
Pm028642 Prunus mume Pm028642 I 0.768
Cla021625 Citrullus lanatus Cla021625 I 0.768
PGSC0003DMG402012772 Solanum tuberosum PGSC0003DMG402012772 I 0.768
Aquca_009_00560 Aquilegia coerulea Aquca_009_00560 I 0.768
GLYMA13G18191 Glycine max GLYMA13G18191 I 0.768
GLYMA19G34590 Glycine max GLYMA19G34590 I 0.768
PRUPE_ppa024802mg Prunus persica PRUPE_ppa024802mg I 0.768
Cucsa.257700 Cucumis sativus Cucsa.257700 I 0.768
MDP0000254224 Malus domestica MDP0000254224 I 0.768
TCM_025849 Theobroma cacao TCM_025849 I 0.768
cassava25975.m1 Manihot esculenta cassava25975.m1 I 0.758
Bo9g002150 Brassica oleracea Bo9g002150 I 0.758
evm.TU.supercontig_18.118 Carica papaya evm.TU.supercontig_18.118 I 0.758
cassava15337.m1 Manihot esculenta cassava15337.m1 I 0.758
gw1.261.12.1 Physcomitrella patens gw1.261.12.1 I 0.758
Bra037322 Brassica rapa Bra037322 I 0.758
TCM_005496 Theobroma cacao TCM_005496 I 0.758
GLYMA03G31830 Glycine max GLYMA03G31830 I 0.758
MDP0000322059 Malus domestica MDP0000322059 I 0.758
PGSC0003DMG400022454 Solanum tuberosum PGSC0003DMG400022454 I 0.758
OLONG_001985 Oryza longistaminata OLONG_001985 I 0.758
MTR_7g074990 Medicago truncatula MTR_7g074990 I 0.758
MTR_7g096530 Medicago truncatula MTR_7g096530 I 0.758
TCM_004106 Theobroma cacao TCM_004106 I 0.758
POPTR_0014s06590 Populus trichocarpa POPTR_0014s06590 I 0.758
evm.TU.supercontig_50.43 Carica papaya evm.TU.supercontig_50.43 I 0.758
Ca_12213 Cicer arietinum Ca_12213 I 0.758
Gorai.001G251600 Gossypium raimondii Gorai.001G251600 I 0.758
gw1.61.81.1 Physcomitrella patens gw1.61.81.1 I 0.747
POPTR_0002s14990 Populus trichocarpa POPTR_0002s14990 I 0.747
TRIUR3_25587 Triticum urartu TRIUR3_25587 I 0.747
orange1.1g041368m.g Citrus sinensis orange1.1g041368m.g I 0.747
POPTR_0002s04210 Populus trichocarpa POPTR_0002s04210 I 0.747
Aquca_034_00401 Aquilegia coerulea Aquca_034_00401 I 0.747
PK23185.1 Cannabis sativa PK23185.1 I 0.747
gene08250-v1.0-hybrid Fragaria vesca gene08250-v1.0-hybrid I 0.747
OB03G20590 Oryza brachyantha OB03G20590 I 0.747
SapurV1A.0006s0980 Salix purpurea SapurV1A.0006s0980 I 0.747
orange1.1g042813m.g Citrus sinensis orange1.1g042813m.g I 0.747
gw1.157.74.1 Physcomitrella patens gw1.157.74.1 I 0.747
MDP0000145761 Malus domestica MDP0000145761 I 0.747
Solyc01g098220.1 Solanum lycopersicum Solyc01g098220.1 I 0.747
Gorai.007G346200 Gossypium raimondii Gorai.007G346200 I 0.747
Pm020629 Prunus mume Pm020629 I 0.747
PRUPE_ppa025349mg Prunus persica PRUPE_ppa025349mg I 0.747
Gorai.007G144400 Gossypium raimondii Gorai.007G144400 I 0.747
Gorai.004G219900 Gossypium raimondii Gorai.004G219900 I 0.747
30072.m000955 Ricinus communis 30072.m000955 I 0.747
Ciclev10021843m.g Citrus clementina Ciclev10021843m.g I 0.747
Cla002965 Citrullus lanatus Cla002965 I 0.747
Ciclev10024416m.g Citrus clementina Ciclev10024416m.g I 0.737
SapurV1A.0378s0180 Salix purpurea SapurV1A.0378s0180 I 0.737
Thhalv10021301m.g Eutrema salsugineum Thhalv10021301m.g I 0.737
Bo1g153580 Brassica oleracea Bo1g153580 I 0.737
Gorai.004G073400 Gossypium raimondii Gorai.004G073400 I 0.737
Carubv10015417m.g Capsella rubella Carubv10015417m.g I 0.737
gene24461-v1.0-hybrid Fragaria vesca gene24461-v1.0-hybrid I 0.737
orange1.1g040761m.g Citrus sinensis orange1.1g040761m.g I 0.737
LBD20 Arabidopsis thaliana AT3G03760 I 0.737
Cagra.2098s0013 Capsella grandiflora Cagra.2098s0013 I 0.737
cassava15612.m1 Manihot esculenta cassava15612.m1 I 0.737
Ca_20429 Cicer arietinum Ca_20429 I 0.737
29883.m002035 Ricinus communis 29883.m002035 I 0.737
GLYMA10G04040 Glycine max GLYMA10G04040 I 0.737
POPTR_0005s24320 Populus trichocarpa POPTR_0005s24320 I 0.737
LBD20 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3000301 I 0.737
POPTR_0013s06070 Populus trichocarpa POPTR_0013s06070 I 0.737
Cucsa.338130 Cucumis sativus Cucsa.338130 I 0.737
Bra036436 Brassica rapa Bra036436 I 0.737
mgf006429m Mimulus guttatus mgf006429m I 0.737
Bostr.19046s0098 Boechera stricta Bostr.19046s0098 I 0.737
Bo3g036000 Brassica oleracea Bo3g036000 I 0.731
Bo4g016000 Brassica oleracea Bo4g016000 I 0.727
MDP0000131964 Malus domestica MDP0000131964 I 0.727
F775_04528 Aegilops tauschii F775_04528 I 0.727
Cagra.2636s0029 Capsella grandiflora Cagra.2636s0029 I 0.727
Sb07g023810 Sorghum bicolor Sb07g023810 I 0.727
Thhalv10017158m.g Eutrema salsugineum Thhalv10017158m.g I 0.727
gw1.35.169.1 Physcomitrella patens gw1.35.169.1 I 0.727
Bo4g191530 Brassica oleracea Bo4g191530 I 0.727
GSMUA_AchrUn_randomG23710_001 Musa acuminata GSMUA_AchrUn_randomG23710_001 I 0.727
Bra016877 Brassica rapa Bra016877 I 0.727
Bostr.25993s0538 Boechera stricta Bostr.25993s0538 I 0.727
Bra004693 Brassica rapa Bra004693 I 0.727
OB08G30680 Oryza brachyantha OB08G30680 I 0.727
Carubv10025548m.g Capsella rubella Carubv10025548m.g I 0.727
LBD16 Arabidopsis lyrata scaffold_403099.1 I 0.717
PGSC0003DMG400009716 Solanum tuberosum PGSC0003DMG400009716 I 0.717
LBD16 Arabidopsis thaliana AT2G42430 D 0.717
OLONG_028429 Oryza longistaminata OLONG_028429 I 0.717
GSMUA_Achr4G28810_001 Musa acuminata GSMUA_Achr4G28810_001 I 0.717
GLYMA19G30200 Glycine max GLYMA19G30200 I 0.717
LPERR08G20530 Leersia perrieri LPERR08G20530 I 0.717
Si015156m.g Setaria italica Si015156m.g I 0.717
Cucsa.053440 Cucumis sativus Cucsa.053440 I 0.717
Bo3g036030 Brassica oleracea Bo3g036030 I 0.717
Bo4g195510 Brassica oleracea Bo4g195510 I 0.717
Cla006088 Citrullus lanatus Cla006088 I 0.717
Bra000257 Brassica rapa Bra000257 I 0.717
LBD16 Vitis vinifera VIT_07s0005g03030 I 0.717
OLONG_010223 Oryza longistaminata OLONG_010223 I 0.707
OGLUM08G25340 Oryza glumaepatula OGLUM08G25340 I 0.707
BRADI3G12550 Brachypodium distachyon BRADI3G12550 I 0.707
GLYMA13G18210 Glycine max GLYMA13G18210 I 0.707
OMERI08G18670 Oryza meridionalis OMERI08G18670 I 0.707
PDK_20s1428661g002 Phoenix dactylifera PDK_20s1428661g002 I 0.707
OBART08G23860 Oryza barthii OBART08G23860 I 0.707
MTR_1g070220 Medicago truncatula MTR_1g070220 I 0.707
MLOC_10784 Hordeum vulgare MLOC_10784 I 0.707
ONIVA09G01330 Oryza nivara ONIVA09G01330 I 0.707
Aquca_017_00693 Aquilegia coerulea Aquca_017_00693 I 0.707
Pm020627 Prunus mume Pm020627 I 0.707
chr1.LjT38H23.30.nd Lotus japonicus chr1.LjT38H23.30.nd I 0.707
GLYMA10G04050 Glycine max GLYMA10G04050 I 0.707
PRUPE_ppa019939mg Prunus persica PRUPE_ppa019939mg I 0.707
BGIOSGA026473 Oryza indica BGIOSGA026473 I 0.707
VIT_07s0005g03020 Vitis vinifera VIT_07s0005g03020 I 0.707
Gorai.004G220000 Gossypium raimondii Gorai.004G220000 I 0.707
Traes_4DL_43D63ABE3 Triticum aestivum Traes_4DL_43D63ABE3 I 0.707
Traes_4AL_CAF4E16B5 Triticum aestivum Traes_4AL_CAF4E16B5 I 0.707
Traes_4BL_A4D0F4AD6 Triticum aestivum Traes_4BL_A4D0F4AD6 I 0.707
OS08G0563400 Oryza sativa OS08G0563400 I 0.707
Pavir.Fa00011 Panicum virgatum Pavir.Fa00011 I 0.707
LBD29 Arabidopsis thaliana AT3G58190 I 0.707
Solyc09g066270.2 Solanum lycopersicum Solyc09g066270.2 I 0.707
Pavir.J03376 Panicum virgatum Pavir.J03376 I 0.707
ORGLA08G0192400 Oryza glaberrima ORGLA08G0192400 I 0.707
ORUFI08G26340 Oryza rufipogon ORUFI08G26340 I 0.707
Ca_07763 Cicer arietinum Ca_07763 I 0.707
OPUNC08G21770 Oryza punctata OPUNC08G21770 I 0.707