scaffold43-EXSNAP2012.41 (Pristionchus exspectatus)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 scaffold43-EXSNAP2012.41 T310261_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-49
M02413_2.00 		Caenorhabditis elegans
NNNNWNHAN
NTDNWNNNN		 PBM
Weirauch et al.(2014)
pTH5891 		0.950 0.586
nhr-1
M00686_2.00 		Caenorhabditis elegans
ARTGATCA
TGATCAYT		 PBM
Narasimhan et al.(2015)
pTH9322 		0.898 0.600
nhr-154
M00698_2.00 		Caenorhabditis elegans
NRBRYCAHWD
HWDTGRYVYN		 PBM
Narasimhan et al.(2015)
pTH10650 		0.869 0.643
CBG23380
M01296_2.00 		Caenorhabditis briggsae
NDBDHHANWN
NWNTDDHVHN		 PBM
Lambert et al.(2019)
pTH11449 		0.866 0.643
nhr-204
M00704_2.00 		Caenorhabditis elegans
NDNTGRTMHN
NDKAYCANHN		 PBM
Narasimhan et al.(2015)
pTH10028 		0.844 0.486
CBG26996_CONSTRUCT
M01300_2.00 		PBM CONSTRUCTS
NNNNTGRWMN
NKWYCANNNN		 PBM
Lambert et al.(2019)
pTH11460 		0.831 0.486
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold43-EXSNAP2012.41 Nuclear receptor 31 100

Links

Other Nuclear receptor family TFs
Other Pristionchus exspectatus TFs

257 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBG23380 Caenorhabditis briggsae CBG23380 D 0.866
nhr-1 Caenorhabditis elegans WBGene00003600 D 0.898
nhr-49 Caenorhabditis elegans WBGene00003639 D 0.950
nhr-154 Caenorhabditis elegans WBGene00007547 D 0.869
nhr-204 Caenorhabditis elegans WBGene00019816 D 0.844
CBG26996_CONSTRUCT PBM CONSTRUCTS CBG26996_CONSTRUCT D 0.831
Bm4980 Brugia malayi Bm4980 I 0.943
Bm5319 Brugia malayi Bm5319 I 0.894
CBG01866 Caenorhabditis briggsae CBG01866 I 0.898
CBG03844 Caenorhabditis briggsae CBG03844 I 0.950
CBG09380 Caenorhabditis briggsae CBG09380 I 0.871
CBG10855 Caenorhabditis briggsae CBG10855 I 0.988
CBG10857 Caenorhabditis briggsae CBG10857 I 0.966
CBG16594 Caenorhabditis briggsae CBG16594 I 0.874
CBG23318 Caenorhabditis briggsae CBG23318 I 0.770
CBG23319 Caenorhabditis briggsae CBG23319 I 0.777
CBG23381 Caenorhabditis briggsae CBG23381 I 0.806
CBG26996 Caenorhabditis briggsae CBG26996 I 0.831
CBN15481 Caenorhabditis brenneri CBN15481 I 0.816
CBN18198 Caenorhabditis brenneri CBN18198 I 0.950
CBN19235 Caenorhabditis brenneri CBN19235 I 0.898
CBN20518 Caenorhabditis brenneri CBN20518 I 0.874
CBN20749 Caenorhabditis brenneri CBN20749 I 0.950
CBN23409 Caenorhabditis brenneri CBN23409 I 0.830
CBN24827 Caenorhabditis brenneri CBN24827 I 0.987
CBN28056 Caenorhabditis brenneri CBN28056 I 0.830
CBN28497 Caenorhabditis brenneri CBN28497 I 0.866
CBN28528 Caenorhabditis brenneri CBN28528 I 0.816
CBN28791 Caenorhabditis brenneri CBN28791 I 0.792
CBN29725 Caenorhabditis brenneri CBN29725 I 0.828
CBN30215 Caenorhabditis brenneri CBN30215 I 0.755
CJA00680 Caenorhabditis japonica CJA00680 I 0.975
CJA01292 Caenorhabditis japonica CJA01292 I 0.758
CJA08896 Caenorhabditis japonica CJA08896 I 0.988
CJA13458 Caenorhabditis japonica CJA13458 I 0.898
CJA14829 Caenorhabditis japonica CJA14829 I 0.793
CJA37776 Caenorhabditis japonica CJA37776 I 0.751
CJA41479 Caenorhabditis japonica CJA41479 I 0.795
CRE00149 Caenorhabditis remanei CRE00149 I 0.989
CRE00606 Caenorhabditis remanei CRE00606 I 0.966
CRE03310 Caenorhabditis remanei CRE03310 I 0.898
CRE08259 Caenorhabditis remanei CRE08259 I 0.950
CRE25378 Caenorhabditis remanei CRE25378 I 0.880
CRE26981 Caenorhabditis remanei CRE26981 I 0.818
CRE26982 Caenorhabditis remanei CRE26982 I 0.770
CRE27050 Caenorhabditis remanei CRE27050 I 0.866
CRE27052 Caenorhabditis remanei CRE27052 I 0.785
CRE27053 Caenorhabditis remanei CRE27053 I 0.828
CRE30787 Caenorhabditis remanei CRE30787 I 0.817
LOAG_00300 Loa loa LOAG_00300 I 0.894
LOAG_08615 Loa loa LOAG_08615 I 0.950
LOAG_08636 Loa loa LOAG_08636 I 0.786
LOAG_16377 Loa loa LOAG_16377 I 0.975
Ppa-nhr-120 Pristionchus pacificus PPA00183 I 0.964
PPA06637 Pristionchus pacificus PPA06637 I 0.937
PPA16374 Pristionchus pacificus PPA16374 I 0.747
PPA20196 Pristionchus pacificus PPA20196 I 0.747
PPA21777 Pristionchus pacificus PPA21777 I 0.991
PPA22443 Pristionchus pacificus PPA22443 I 0.749
PPA24468 Pristionchus pacificus PPA24468 I 0.862
PPA24481 Pristionchus pacificus PPA24481 I 0.945
PPA29597 Pristionchus pacificus PPA29597 I 0.949
nhr-10 Caenorhabditis elegans WBGene00003609 I 0.887
nhr-47 Caenorhabditis elegans WBGene00003637 I 0.801
nhr-68 Caenorhabditis elegans WBGene00003658 I 0.770
nhr-101 Caenorhabditis elegans WBGene00003691 I 0.802
nhr-120 Caenorhabditis elegans WBGene00003710 I 0.988
nhr-136 Caenorhabditis elegans WBGene00003726 I 0.887
nhr-153 Caenorhabditis elegans WBGene00007546 I 0.798
nhr-173 Caenorhabditis elegans WBGene00016975 I 0.966
nhr-141 Caenorhabditis elegans WBGene00017787 I 0.833
WBGene00236987 Onchocerca volvulus WBGene00236987 I 0.949
WBGene00240403 Onchocerca volvulus WBGene00240403 I 0.971
WBGene00240560 Onchocerca volvulus WBGene00240560 I 0.789
WBGene00241993 Onchocerca volvulus WBGene00241993 I 0.885
Minc11307 Meloidogyne incognita Minc11307 I 0.773
Minc13747 Meloidogyne incognita Minc13747 I 0.771
Minc17538 Meloidogyne incognita Minc17538 I 0.771
ACAC_0000711701 Angiostrongylus cantonensis ACAC_0000711701 I 0.946
ACAC_0001297301 Angiostrongylus cantonensis ACAC_0001297301 I 0.913
ACOC_0000700901 Angiostrongylus costaricensis ACOC_0000700901 I 0.893
ACOC_0000869501 Angiostrongylus costaricensis ACOC_0000869501 I 0.810
ALUE_0002179401 Ascaris lumbricoides ALUE_0002179401 I 0.891
ANCCAN_09880 Ancylostoma caninum ANCCAN_09880 I 0.940
ANCCAN_14103 Ancylostoma caninum ANCCAN_14103 I 0.891
ANCCAN_17081 Ancylostoma caninum ANCCAN_17081 I 0.891
ANCCEY_01254 Ancylostoma ceylanicum ANCCEY_01254 I 0.971
ANCCEY_01961 Ancylostoma ceylanicum ANCCEY_01961 I 0.898
ASIM_0001308601 Anisakis simplex ASIM_0001308601 I 0.833
ASIM_0001569801 Anisakis simplex ASIM_0001569801 I 0.981
ASU_02770 Ascaris suum ASU_02770 I 0.788
ASU_03657 Ascaris suum ASU_03657 I 0.979
ASU_03870 Ascaris suum ASU_03870 I 0.950
ASU_10584 Ascaris suum ASU_10584 I 0.839
ASU_12501 Ascaris suum ASU_12501 I 0.891
ASU_13587 Ascaris suum ASU_13587 I 0.828
augustus_masked-nMf.1.1.scaf06210-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf06210-processed-gene-0.0 I 0.943
augustus_masked-nMf.1.1.scaf15282-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf15282-processed-gene-0.0 I 0.890
augustus_masked-nMf.1.1.scaf15936-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf15936-processed-gene-0.0 I 0.890
augustus_masked-nMf.1.1.scaf24822-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf24822-processed-gene-0.0 I 0.936
BTMF_0000217201 Brugia timori BTMF_0000217201 I 0.943
BTMF_0000941401 Brugia timori BTMF_0000941401 I 0.975
BTMF_0001388101 Brugia timori BTMF_0001388101 I 0.894
BXY_0360200 Bursaphelenchus xylophilus BXY_0360200 I 0.906
BXY_0599800 Bursaphelenchus xylophilus BXY_0599800 I 0.929
BXY_0631600 Bursaphelenchus xylophilus BXY_0631600 I 0.891
BXY_0988800 Bursaphelenchus xylophilus BXY_0988800 I 0.771
BXY_1057600 Bursaphelenchus xylophilus BXY_1057600 I 0.949
BXY_1375200 Bursaphelenchus xylophilus BXY_1375200 I 0.798
DICVIV_00957 Dictyocaulus viviparus DICVIV_00957 I 0.946
DICVIV_03784 Dictyocaulus viviparus DICVIV_03784 I 0.772
DICVIV_09815 Dictyocaulus viviparus DICVIV_09815 I 0.893
DME_0000591901 Dracunculus medinensis DME_0000591901 I 0.944
DME_0000693601 Dracunculus medinensis DME_0000693601 I 0.894
DME_0000747901 Dracunculus medinensis DME_0000747901 I 0.834
EEL_0000204901 Elaeophora elaphi EEL_0000204901 I 0.786
EEL_0000989101 Elaeophora elaphi EEL_0000989101 I 0.974
EVEC_0000027301 Enterobius vermicularis EVEC_0000027301 I 0.893
EVEC_0000477801 Enterobius vermicularis EVEC_0000477801 I 0.788
EVEC_0001313601 Enterobius vermicularis EVEC_0001313601 I 0.916
GPLIN_000284100 Globodera pallida GPLIN_000284100 I 0.765
GPLIN_000337500 Globodera pallida GPLIN_000337500 I 0.926
GPLIN_001175700 Globodera pallida GPLIN_001175700 I 0.950
Hba_12763 Heterorhabditis bacteriophora Hba_12763 I 0.892
HCOI00601000 Haemonchus contortus HCOI00601000 I 0.901
HCOI00618700 Haemonchus contortus HCOI00618700 I 0.946
HCOI00673400 Haemonchus contortus HCOI00673400 I 0.793
HCOI01292200 Haemonchus contortus HCOI01292200 I 0.991
HCOI01525900 Haemonchus contortus HCOI01525900 I 0.938
HCOI01554200 Haemonchus contortus HCOI01554200 I 0.898
HCOI01687000 Haemonchus contortus HCOI01687000 I 0.793
HPBE_0000704501 Heligmosomoides bakeri HPBE_0000704501 I 0.977
HPBE_0000837301 Heligmosomoides bakeri HPBE_0000837301 I 0.898
HPBE_0001154501 Heligmosomoides bakeri HPBE_0001154501 I 0.810
HPBE_0001246601 Heligmosomoides bakeri HPBE_0001246601 I 0.946
HPLM_0000564201 Haemonchus placei HPLM_0000564201 I 0.901
HPLM_0000769401 Haemonchus placei HPLM_0000769401 I 0.991
L596_g11035 Steinernema carpocapsae L596_g11035 I 0.932
L596_g12276 Steinernema carpocapsae L596_g12276 I 0.877
L596_g12321 Steinernema carpocapsae L596_g12321 I 0.899
L596_g14199 Steinernema carpocapsae L596_g14199 I 0.771
L596_g19151 Steinernema carpocapsae L596_g19151 I 0.839
L596_g23123 Steinernema carpocapsae L596_g23123 I 0.773
L596_g23777 Steinernema carpocapsae L596_g23777 I 0.892
L596_g23863 Steinernema carpocapsae L596_g23863 I 0.958
L596_g27472 Steinernema carpocapsae L596_g27472 I 0.984
L889_g11570 Steinernema feltiae L889_g11570 I 0.766
L889_g1557 Steinernema feltiae L889_g1557 I 0.991
L889_g17247 Steinernema feltiae L889_g17247 I 0.932
L889_g1891 Steinernema feltiae L889_g1891 I 0.977
L889_g22901 Steinernema feltiae L889_g22901 I 0.839
L889_g29879 Steinernema feltiae L889_g29879 I 0.899
L889_g7780 Steinernema feltiae L889_g7780 I 0.877
L892_g17612 Steinernema scapterisci L892_g17612 I 0.987
L892_g2422 Steinernema scapterisci L892_g2422 I 0.771
L892_g4134 Steinernema scapterisci L892_g4134 I 0.763
L892_g4169 Steinernema scapterisci L892_g4169 I 0.987
L892_g5079 Steinernema scapterisci L892_g5079 I 0.839
L892_g8671 Steinernema scapterisci L892_g8671 I 0.877
L893_g13285 Steinernema glaseri L893_g13285 I 0.932
L893_g15276 Steinernema glaseri L893_g15276 I 0.839
L893_g21283 Steinernema glaseri L893_g21283 I 0.766
L893_g25227 Steinernema glaseri L893_g25227 I 0.892
L893_g28857 Steinernema glaseri L893_g28857 I 0.990
L893_g3010 Steinernema glaseri L893_g3010 I 0.899
L893_g3565 Steinernema glaseri L893_g3565 I 0.987
L898_g22454 Steinernema monticolum L898_g22454 I 0.877
L898_g23058 Steinernema monticolum L898_g23058 I 0.766
L898_g26357 Steinernema monticolum L898_g26357 I 0.932
L898_g2764 Steinernema monticolum L898_g2764 I 0.899
L898_g8573 Steinernema monticolum L898_g8573 I 0.839
L898_g9866 Steinernema monticolum L898_g9866 I 0.990
MhA1_Contig2491.frz3.gene4 Meloidogyne hapla MhA1_Contig2491.frz3.gene4 I 0.877
MhA1_Contig320.frz3.gene45 Meloidogyne hapla MhA1_Contig320.frz3.gene45 I 0.886
MhA1_Contig691.frz3.gene13 Meloidogyne hapla MhA1_Contig691.frz3.gene13 I 0.777
MhA1_Contig817.frz3.gene1 Meloidogyne hapla MhA1_Contig817.frz3.gene1 I 0.771
nAv.1.0.1.g09196 Acanthocheilonema viteae nAv.1.0.1.g09196 I 0.786
NBR_0001576001 Nippostrongylus brasiliensis NBR_0001576001 I 0.799
nDi.2.2.2.g02318 Dirofilaria immitis nDi.2.2.2.g02318 I 0.894
nDi.2.2.2.g09348 Dirofilaria immitis nDi.2.2.2.g09348 I 0.786
NECAME_00872 Necator americanus NECAME_00872 I 0.891
NECAME_01944 Necator americanus NECAME_01944 I 0.948
NECAME_08394 Necator americanus NECAME_08394 I 0.992
nLs.2.1.2.g04051 Litomosoides sigmodontis nLs.2.1.2.g04051 I 0.789
nOo.2.0.1.g01530 Onchocerca ochengi nOo.2.0.1.g01530 I 0.894
nOo.2.0.1.g02345 Onchocerca ochengi nOo.2.0.1.g02345 I 0.949
nOo.2.0.1.g03859 Onchocerca ochengi nOo.2.0.1.g03859 I 0.789
OFLC_0001450101 Onchocerca flexuosa OFLC_0001450101 I 0.894
PEQ_0000391501 Parascaris equorum PEQ_0000391501 I 0.950
PEQ_0000722401 Parascaris equorum PEQ_0000722401 I 0.979
PTRK_0000194200 Parastrongyloides trichosuri PTRK_0000194200 I 0.796
PTRK_0000480700 Parastrongyloides trichosuri PTRK_0000480700 I 0.942
PTRK_0000720500 Parastrongyloides trichosuri PTRK_0000720500 I 0.944
PTRK_0000994100 Parastrongyloides trichosuri PTRK_0000994100 I 0.947
PTRK_0001020800 Parastrongyloides trichosuri PTRK_0001020800 I 0.950
PTRK_0001163100 Parastrongyloides trichosuri PTRK_0001163100 I 0.798
PTRK_0001312000 Parastrongyloides trichosuri PTRK_0001312000 I 0.888
RSKR_0000342500 Rhabditophanes kr3021 RSKR_0000342500 I 0.903
RSKR_0001171300 Rhabditophanes kr3021 RSKR_0001171300 I 0.824
scaffold107-EXSNAP2012.33 Pristionchus exspectatus scaffold107-EXSNAP2012.33 I 0.749
scaffold251-EXSNAP2012.44 Pristionchus exspectatus scaffold251-EXSNAP2012.44 I 0.939
scaffold265-EXSNAP2012.2 Pristionchus exspectatus scaffold265-EXSNAP2012.2 I 0.862
scaffold290-EXSNAP2012.30 Pristionchus exspectatus scaffold290-EXSNAP2012.30 I 0.747
scaffold314-EXSNAP2012.19 Pristionchus exspectatus scaffold314-EXSNAP2012.19 I 0.822
scaffold384-EXSNAP2012.4 Pristionchus exspectatus scaffold384-EXSNAP2012.4 I 0.964
scaffold426-EXSNAP2012.35 Pristionchus exspectatus scaffold426-EXSNAP2012.35 I 0.937
scaffold552-EXSNAP2012.17 Pristionchus exspectatus scaffold552-EXSNAP2012.17 I 0.945
scaffold552-EXSNAP2012.18 Pristionchus exspectatus scaffold552-EXSNAP2012.18 I 0.940
scaffold572-EXSNAP2012.7 Pristionchus exspectatus scaffold572-EXSNAP2012.7 I 0.964
scaffold598-EXSNAP2012.5 Pristionchus exspectatus scaffold598-EXSNAP2012.5 I 0.936
scaffold605-EXSNAP2012.9 Pristionchus exspectatus scaffold605-EXSNAP2012.9 I 0.933
scaffold826-EXSNAP2012.10 Pristionchus exspectatus scaffold826-EXSNAP2012.10 I 0.939
SMUV_0000475001 Syphacia muris SMUV_0000475001 I 0.839
SMUV_0000657401 Syphacia muris SMUV_0000657401 I 0.788
SMUV_0000708401 Syphacia muris SMUV_0000708401 I 0.897
SMUV_0001072301 Syphacia muris SMUV_0001072301 I 0.873
SPAL_0000038800 Strongyloides papillosus SPAL_0000038800 I 0.815
SPAL_0000231300 Strongyloides papillosus SPAL_0000231300 I 0.783
SPAL_0000490500 Strongyloides papillosus SPAL_0000490500 I 0.890
SPAL_0000841700 Strongyloides papillosus SPAL_0000841700 I 0.943
SPAL_0001084400 Strongyloides papillosus SPAL_0001084400 I 0.798
SPAL_0001084500 Strongyloides papillosus SPAL_0001084500 I 0.798
SPAL_0001099500 Strongyloides papillosus SPAL_0001099500 I 0.950
SPAL_0001637600 Strongyloides papillosus SPAL_0001637600 I 0.948
SPAL_0001712900 Strongyloides papillosus SPAL_0001712900 I 0.942
SSTP_0000055100 Strongyloides stercoralis SSTP_0000055100 I 0.948
SSTP_0000145700 Strongyloides stercoralis SSTP_0000145700 I 0.944
SSTP_0000408200 Strongyloides stercoralis SSTP_0000408200 I 0.782
SSTP_0000546600 Strongyloides stercoralis SSTP_0000546600 I 0.905
SSTP_0000769100 Strongyloides stercoralis SSTP_0000769100 I 0.950
SSTP_0001035300 Strongyloides stercoralis SSTP_0001035300 I 0.798
SSTP_0001081300 Strongyloides stercoralis SSTP_0001081300 I 0.784
SSTP_0001253400 Strongyloides stercoralis SSTP_0001253400 I 0.942
SVE_0146100 Strongyloides venezuelensis SVE_0146100 I 0.942
SVE_0268000 Strongyloides venezuelensis SVE_0268000 I 0.826
SVE_0429000 Strongyloides venezuelensis SVE_0429000 I 0.948
SVE_0858700 Strongyloides venezuelensis SVE_0858700 I 0.950
SVE_0956400 Strongyloides venezuelensis SVE_0956400 I 0.798
SVE_1749000 Strongyloides venezuelensis SVE_1749000 I 0.783
SVE_1799100 Strongyloides venezuelensis SVE_1799100 I 0.943
SVE_1951500 Strongyloides venezuelensis SVE_1951500 I 0.890
TCLT_0000256201 Thelazia callipaeda TCLT_0000256201 I 0.953
TCLT_0000399401 Thelazia callipaeda TCLT_0000399401 I 0.894
TCLT_0000461101 Thelazia callipaeda TCLT_0000461101 I 0.951
TCLT_0000612301 Thelazia callipaeda TCLT_0000612301 I 0.829
PPA10975 Pristionchus pacificus PPA10975 N 0.901
PPA27013 Pristionchus pacificus PPA27013 N 0.778
ALUE_0001217501 Ascaris lumbricoides ALUE_0001217501 N 0.756
ANCCAN_20955 Ancylostoma caninum ANCCAN_20955 N 0.845
ANCCEY_01235 Ancylostoma ceylanicum ANCCEY_01235 N 0.870
ASU_02757 Ascaris suum ASU_02757 N 0.770
Hba_12764 Heterorhabditis bacteriophora Hba_12764 N 0.889
scaffold178-EXSNAP2012.20 Pristionchus exspectatus scaffold178-EXSNAP2012.20 N 0.781
scaffold204-EXSNAP2012.8 Pristionchus exspectatus scaffold204-EXSNAP2012.8 N 0.781
scaffold92-EXSNAP2012.31 Pristionchus exspectatus scaffold92-EXSNAP2012.31 N 0.854
TCNE_0001076801 Toxocara canis TCNE_0001076801 N 0.796
TELCIR_12561 Teladorsagia circumcincta TELCIR_12561 N 0.847