CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
FOXJ1
(
Loxodonta africana
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00250 (Forkhead)
IPR001766
ENSLAFG00000032043
T186068_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Foxj1
M00161_2.00
Mus musculus
NNHAAACAAANN
NNTTTGTTTDNN
PBM
Badis et al.(2009)
Foxj1_3125
0.894
1.000
FOXJ1
M10547_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HFH4_01
0.894
1.000
Foxj2
M00790_2.00
Mus musculus
VHMAAYANN
NNTRTTKDB
PBM
Weirauch et al.(2013)
pTH3043
0.679
0.593
FOXJ2
M03016_2.00
Homo sapiens
GTAAACARTMAACA
TGTTKAYTGTTTAC
SELEX
Jolma et al.(2013)
FOXJ2_1
0.679
0.593
FOXJ2
M03017_2.00
Homo sapiens
RTAAACAH
DTGTTTAY
SELEX
Jolma et al.(2013)
FOXJ2_2
0.679
0.593
FOXJ2
M03018_2.00
Homo sapiens
GTAAACAWMAACA
TGTTKWTGTTTAC
SELEX
Jolma et al.(2013)
FOXJ2_3
0.679
0.593
FOXJ2
M04809_2.00
Homo sapiens
NTRTTTACAAYANN
NNTRTTGTAAAYAN
SELEX
Yin et al.(2017)
FOXJ2_eDBD_HT-SELEX
0.679
0.593
FOXJ2
M09084_2.00
Homo sapiens
WARAYAAAYA
TRTTTRTYTW
Misc
Kulakovskiy et al.(2013)
FOXJ2_HUMAN.H11MO.0.C
0.679
0.593
Foxj2
M09100_2.00
Mus musculus
WARAYAAAYA
TRTTTRTYTW
Misc
Kulakovskiy et al.(2013)
FOXJ2_MOUSE.H11MO.0.C
0.679
0.593
FOXJ2
M10527_2.00
Homo sapiens
HHNHMRAYAAAYANHNND
HNNDNTRTTTRTYKDNDD
Transfac
Matys et al.(2006)
V$FOXJ2_01
0.679
0.593
FOXJ2
M10528_2.00
Homo sapiens
VYMAYAATATTTKN
NMAAATATTRTKRB
Transfac
Matys et al.(2006)
V$FOXJ2_02
0.679
0.593
FOXJ2
M04810_2.00
Homo sapiens
NTRTTTACAAYANN
NNTRTTGTAAAYAN
SELEX
Yin et al.(2017)
FOXJ2_eDBD_Methyl-HT-SELEX
0.679
0.593
Foxj2
M01980_2.00
Mus musculus
RTAAACAN
NTGTTTAY
PBM
Weirauch et al.(2014)
pTH6638
0.676
0.593
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLAFP00000023945
Forkhead
111
200
KPPYSYATLICMAMQASKATKITLSAIYKWITDNFCYFRHADPTWQNSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAF
ENSLAFP00000026899
Forkhead
121
210
KPPYSYATLICMAMQASKATKITLSAIYKWITDNFCYFRHADPTWQNSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAF
Links
Other
Forkhead
family TFs
Other
Loxodonta africana
TFs
190 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30128.m008984
Ricinus communis
30128.m008984
I
30199.m000879
Ricinus communis
30199.m000879
I
AGL80
Arabidopsis thaliana
AT5G48670
D
Al_scaffold_0003_569
Arabidopsis lyrata
Al_scaffold_0003_569
I
Aquca_007_00647
Aquilegia coerulea
Aquca_007_00647
I
Aquca_027_00068
Aquilegia coerulea
Aquca_027_00068
I
Bo2g104810
Brassica oleracea
Bo2g104810
I
Bo9g078450
Brassica oleracea
Bo9g078450
I
Bostr.2392s0039
Boechera stricta
Bostr.2392s0039
I
Bostr.2570s0082
Boechera stricta
Bostr.2570s0082
I
Bra018490
Brassica rapa
Bra018490
I
Bra029469
Brassica rapa
Bra029469
I
Cagra.1772s0003
Capsella grandiflora
Cagra.1772s0003
I
Carubv10014232m.g
Capsella rubella
Carubv10014232m.g
I
cassava15247.m1
Manihot esculenta
cassava15247.m1
I
cassava19828.m1
Manihot esculenta
cassava19828.m1
I
Ca_06495
Cicer arietinum
Ca_06495
I
Ca_13275
Cicer arietinum
Ca_13275
I
chr6.LjT19B22.120.nd
Lotus japonicus
chr6.LjT19B22.120.nd
I
Ciclev10006519m.g
Citrus clementina
Ciclev10006519m.g
I
Ciclev10013728m.g
Citrus clementina
Ciclev10013728m.g
I
Ciclev10024463m.g
Citrus clementina
Ciclev10024463m.g
I
Cla005226
Citrullus lanatus
Cla005226
I
Cla009163
Citrullus lanatus
Cla009163
I
Cucsa.050930
Cucumis sativus
Cucsa.050930
I
Eucgr.E01733
Eucalyptus grandis
Eucgr.E01733
I
Eucgr.E01737
Eucalyptus grandis
Eucgr.E01737
I
evm.TU.contig_24608
Carica papaya
evm.TU.contig_24608
I
evm.TU.contig_24864.1
Carica papaya
evm.TU.contig_24864.1
N
evm.TU.contig_25049.1
Carica papaya
evm.TU.contig_25049.1
I
evm.TU.contig_25049.2
Carica papaya
evm.TU.contig_25049.2
N
evm.TU.contig_25049.5
Carica papaya
evm.TU.contig_25049.5
I
evm.TU.contig_25253.1
Carica papaya
evm.TU.contig_25253.1
N
evm.TU.contig_25253.2
Carica papaya
evm.TU.contig_25253.2
N
evm.TU.contig_25253.3
Carica papaya
evm.TU.contig_25253.3
N
evm.TU.contig_25253.5
Carica papaya
evm.TU.contig_25253.5
I
evm.TU.contig_25982.2
Carica papaya
evm.TU.contig_25982.2
I
evm.TU.contig_26058.1
Carica papaya
evm.TU.contig_26058.1
I
evm.TU.contig_26058.2
Carica papaya
evm.TU.contig_26058.2
I
evm.TU.contig_27586
Carica papaya
evm.TU.contig_27586
I
evm.TU.contig_28089
Carica papaya
evm.TU.contig_28089
I
evm.TU.contig_28448.1
Carica papaya
evm.TU.contig_28448.1
N
evm.TU.contig_28448.2
Carica papaya
evm.TU.contig_28448.2
N
evm.TU.contig_31147
Carica papaya
evm.TU.contig_31147
I
evm.TU.contig_32899.1
Carica papaya
evm.TU.contig_32899.1
I
evm.TU.contig_33457.2
Carica papaya
evm.TU.contig_33457.2
I
evm.TU.contig_35009
Carica papaya
evm.TU.contig_35009
I
evm.TU.contig_35265
Carica papaya
evm.TU.contig_35265
I
evm.TU.contig_35762
Carica papaya
evm.TU.contig_35762
N
evm.TU.contig_35868
Carica papaya
evm.TU.contig_35868
N
evm.TU.contig_36181
Carica papaya
evm.TU.contig_36181
I
evm.TU.contig_37084
Carica papaya
evm.TU.contig_37084
I
evm.TU.contig_38146
Carica papaya
evm.TU.contig_38146
I
evm.TU.contig_38760
Carica papaya
evm.TU.contig_38760
N
evm.TU.contig_40008
Carica papaya
evm.TU.contig_40008
I
evm.TU.contig_40164
Carica papaya
evm.TU.contig_40164
N
evm.TU.contig_40485
Carica papaya
evm.TU.contig_40485
I
evm.TU.contig_40499.2
Carica papaya
evm.TU.contig_40499.2
I
evm.TU.contig_43368
Carica papaya
evm.TU.contig_43368
I
evm.TU.contig_43908
Carica papaya
evm.TU.contig_43908
N
evm.TU.contig_44957
Carica papaya
evm.TU.contig_44957
I
evm.TU.contig_46342
Carica papaya
evm.TU.contig_46342
N
evm.TU.supercontig_100.22
Carica papaya
evm.TU.supercontig_100.22
N
evm.TU.supercontig_1136.1
Carica papaya
evm.TU.supercontig_1136.1
N
evm.TU.supercontig_117.18
Carica papaya
evm.TU.supercontig_117.18
I
evm.TU.supercontig_117.19
Carica papaya
evm.TU.supercontig_117.19
I
evm.TU.supercontig_118.30
Carica papaya
evm.TU.supercontig_118.30
I
evm.TU.supercontig_1237.1
Carica papaya
evm.TU.supercontig_1237.1
I
evm.TU.supercontig_1256.1
Carica papaya
evm.TU.supercontig_1256.1
N
evm.TU.supercontig_135.3
Carica papaya
evm.TU.supercontig_135.3
N
evm.TU.supercontig_135.5
Carica papaya
evm.TU.supercontig_135.5
N
evm.TU.supercontig_139.40
Carica papaya
evm.TU.supercontig_139.40
I
evm.TU.supercontig_1750.1
Carica papaya
evm.TU.supercontig_1750.1
I
evm.TU.supercontig_1750.2
Carica papaya
evm.TU.supercontig_1750.2
I
evm.TU.supercontig_185.11
Carica papaya
evm.TU.supercontig_185.11
I
evm.TU.supercontig_185.12
Carica papaya
evm.TU.supercontig_185.12
I
evm.TU.supercontig_185.2
Carica papaya
evm.TU.supercontig_185.2
I
evm.TU.supercontig_185.4
Carica papaya
evm.TU.supercontig_185.4
N
evm.TU.supercontig_185.6
Carica papaya
evm.TU.supercontig_185.6
N
evm.TU.supercontig_185.7
Carica papaya
evm.TU.supercontig_185.7
I
evm.TU.supercontig_185.8
Carica papaya
evm.TU.supercontig_185.8
N
evm.TU.supercontig_185.9
Carica papaya
evm.TU.supercontig_185.9
I
evm.TU.supercontig_265.1
Carica papaya
evm.TU.supercontig_265.1
I
evm.TU.supercontig_265.3
Carica papaya
evm.TU.supercontig_265.3
N
evm.TU.supercontig_265.6
Carica papaya
evm.TU.supercontig_265.6
N
evm.TU.supercontig_30.163
Carica papaya
evm.TU.supercontig_30.163
N
evm.TU.supercontig_30.164
Carica papaya
evm.TU.supercontig_30.164
N
evm.TU.supercontig_30.166
Carica papaya
evm.TU.supercontig_30.166
I
evm.TU.supercontig_34.40
Carica papaya
evm.TU.supercontig_34.40
N
evm.TU.supercontig_358.1
Carica papaya
evm.TU.supercontig_358.1
N
gene04949-v1.0-hybrid
Fragaria vesca
gene04949-v1.0-hybrid
I
gene15899-v1.0-hybrid
Fragaria vesca
gene15899-v1.0-hybrid
N
gene18029-v1.0-hybrid
Fragaria vesca
gene18029-v1.0-hybrid
I
gene22916-v1.0-hybrid
Fragaria vesca
gene22916-v1.0-hybrid
I
gene22967-v1.0-hybrid
Fragaria vesca
gene22967-v1.0-hybrid
I
gene23924-v1.0-hybrid
Fragaria vesca
gene23924-v1.0-hybrid
I
GLYMA11G33460
Glycine max
GLYMA11G33460
I
GLYMA18G04760
Glycine max
GLYMA18G04760
I
Gorai.004G292000
Gossypium raimondii
Gorai.004G292000
I
Gorai.013G210200
Gossypium raimondii
Gorai.013G210200
I
GSMUA_Achr2G18400_001
Musa acuminata
GSMUA_Achr2G18400_001
N
GSMUA_Achr3G05500_001
Musa acuminata
GSMUA_Achr3G05500_001
I
GSMUA_Achr3G08500_001
Musa acuminata
GSMUA_Achr3G08500_001
N
LjSGA_104570.1
Lotus japonicus
LjSGA_104570.1
I
LjSGA_147985.1
Lotus japonicus
LjSGA_147985.1
I
LjT40B16.70.nc
Lotus japonicus
LjT40B16.70.nc
I
Lus10014578.g
Linum usitatissimum
Lus10014578.g
I
Lus10032108.g
Linum usitatissimum
Lus10032108.g
I
MDP0000846004
Malus domestica
MDP0000846004
I
MDP0000925348
Malus domestica
MDP0000925348
I
mgf026186m
Mimulus guttatus
mgf026186m
I
MTR_3g065100
Medicago truncatula
MTR_3g065100
I
orange1.1g040642m.g
Citrus sinensis
orange1.1g040642m.g
I
PDK_20s1688321g001
Phoenix dactylifera
PDK_20s1688321g001
N
Pm003257
Prunus mume
Pm003257
I
Pm004396
Prunus mume
Pm004396
I
POPTR_0005s00420
Populus trichocarpa
POPTR_0005s00420
I
POPTR_0013s00350
Populus trichocarpa
POPTR_0013s00350
I
POPTR_0013s01880
Populus trichocarpa
POPTR_0013s01880
I
PRUPE_ppa018168mg
Prunus persica
PRUPE_ppa018168mg
I
PRUPE_ppa019749mg
Prunus persica
PRUPE_ppa019749mg
I
SapurV1A.0066s0310
Salix purpurea
SapurV1A.0066s0310
I
SapurV1A.0442s0180
Salix purpurea
SapurV1A.0442s0180
I
SapurV1A.0442s0190
Salix purpurea
SapurV1A.0442s0190
I
Solyc01g102260.2
Solanum lycopersicum
Solyc01g102260.2
I
TCM_025670
Theobroma cacao
TCM_025670
I
TCM_025671
Theobroma cacao
TCM_025671
I
TCM_025676
Theobroma cacao
TCM_025676
N
TCM_026842
Theobroma cacao
TCM_026842
I
TCM_042799
Theobroma cacao
TCM_042799
I
Thhalv10002346m.g
Eutrema salsugineum
Thhalv10002346m.g
I
Thhalv10002350m.g
Eutrema salsugineum
Thhalv10002350m.g
I
Thhalv10002352m.g
Eutrema salsugineum
Thhalv10002352m.g
I
Thhalv10019449m.g
Eutrema salsugineum
Thhalv10019449m.g
I
Thhalv10019451m.g
Eutrema salsugineum
Thhalv10019451m.g
I
Thhalv10019516m.g
Eutrema salsugineum
Thhalv10019516m.g
I
Thhalv10019579m.g
Eutrema salsugineum
Thhalv10019579m.g
I
Thhalv10019751m.g
Eutrema salsugineum
Thhalv10019751m.g
I
Thhalv10019810m.g
Eutrema salsugineum
Thhalv10019810m.g
I
Thhalv10022373m.g
Eutrema salsugineum
Thhalv10022373m.g
I
Thhalv10023873m.g
Eutrema salsugineum
Thhalv10023873m.g
I
Thhalv10024119m.g
Eutrema salsugineum
Thhalv10024119m.g
I
VIT_14s0060g00300
Vitis vinifera
VIT_14s0060g00300
I