SMUV_0000993401 (Syphacia muris)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 SMUV_0000993401 T075156_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Creb1
M00992_2.00 		Mus musculus
NNTGACGTCV
BGACGTCANN		 PBM
Mann et al.(2013)
CREB1_UM_HK 		0.838 0.730
Creb1
M01806_2.00 		Mus musculus
VTKACGHNN
NNDCGTMAB		 PBM
Weirauch et al.(2014)
pTH5080 		0.838 0.730
CREB1
M04264_2.00 		Homo sapiens
NVTKACGTMABN
NVTKACGTMABN		 SELEX
Yin et al.(2017)
CREB1_FL_HT-SELEX 		0.838 0.730
CREB1
M04258_2.00 		Homo sapiens
NVTKACGTMANN
NNTKACGTMABN		 SELEX
Yin et al.(2017)
CREB1_eDBD_HT-SELEX_1 		0.838 0.730
CREB1
M04259_2.00 		Homo sapiens
NRTGACGTR
YACGTCAYN		 SELEX
Yin et al.(2017)
CREB1_eDBD_HT-SELEX_2 		0.838 0.730
CREB1
M04260_2.00 		Homo sapiens
VTSACRYGWBAY
RTVWCRYGTSAB		 SELEX
Yin et al.(2017)
CREB1_eDBD_HT-SELEX_3 		0.838 0.730
CREB1
M04022_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Rodriguez-Martinez et al.(2017)
CREB1.1 		0.838 0.730
CREB1
M04023_2.00 		Homo sapiens
RTGACGTADB
VHTACGTCAY		 SELEX
Rodriguez-Martinez et al.(2017)
CREB1.2 		0.838 0.730
CREB1
M08066_2.00 		Homo sapiens
NVTGACGTCABN
NVTGACGTCABN		 ChIP-seq
Mathelier et al.(2014)
MA0018.3 		0.838 0.730
CREB1
M08791_2.00 		Homo sapiens
WKRCGTCAYYN
NRRTGACGYMW		 Misc
Kulakovskiy et al.(2013)
CREB1_HUMAN.H11MO.0.A 		0.838 0.730
Creb1
M08824_2.00 		Mus musculus
WKRCGTCAYYN
NRRTGACGYMW		 Misc
Kulakovskiy et al.(2013)
CREB1_MOUSE.H11MO.0.A 		0.838 0.730
CREB1
M09948_2.00 		Homo sapiens
TGACGTMW
WKACGTCA		 Transfac
Matys et al.(2006)
V$CREB_01 		0.838 0.730
CREB1
M09949_2.00 		Homo sapiens
BBGDTGACGYVV
BBRCGTCAHCVV		 Transfac
Matys et al.(2006)
V$CREB_02 		0.838 0.730
CREB1
M09950_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CREB1_Q3 		0.838 0.730
CREB1
M09951_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CREB1_Q6 		0.838 0.730
CREB1
M09952_2.00 		Homo sapiens
BSTGACGYARNN
NNYTRCGTCASV		 Transfac
Matys et al.(2006)
V$CREB_Q2 		0.838 0.730
CREB1
M09953_2.00 		Homo sapiens
BSTGACGYMRBV
BVYKRCGTCASV		 Transfac
Matys et al.(2006)
V$CREB_Q4 		0.838 0.730
CREB1
M09954_2.00 		Homo sapiens
KKGGGKTGACGYMND
HNKRCGTCAMCCCMM		 Transfac
Matys et al.(2006)
V$TAXCREB_01 		0.838 0.730
CREB1
M09955_2.00 		Homo sapiens
RTGACGCATAYCCCC
GGGGRTATGCGTCAY		 Transfac
Matys et al.(2006)
V$TAXCREB_02 		0.838 0.730
Creb1
M00991_2.00 		Mus musculus
NNRTGACGYVN
NBRCGTCAYNN		 PBM
Mann et al.(2013)
CREB1_M_HK 		0.838 0.730
CREB1
M04265_2.00 		Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN		 SELEX
Yin et al.(2017)
CREB1_FL_Methyl-HT-SELEX 		0.838 0.730
CREB1
M04261_2.00 		Homo sapiens
BRTGAYGYGND
HNCRCRTCAYV		 SELEX
Yin et al.(2017)
CREB1_eDBD_Methyl-HT-SELEX_1 		0.838 0.730
CREB1
M04262_2.00 		Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN		 SELEX
Yin et al.(2017)
CREB1_eDBD_Methyl-HT-SELEX_2 		0.838 0.730
CREB1
M04263_2.00 		Homo sapiens
NRTGACGYV
BRCGTCAYN		 SELEX
Yin et al.(2017)
CREB1_eDBD_Methyl-HT-SELEX_3 		0.838 0.730
ATF1
M08792_2.00 		Homo sapiens
HBRCGTCAYHN
NDRTGACGYVD		 Misc
Kulakovskiy et al.(2013)
ATF1_HUMAN.H11MO.0.B 		0.836 0.730
ATF1
M09485_2.00 		Homo sapiens
NVTGACGTMA
TKACGTCABN		 Misc
Heinz et al.(2010)
K562-ATF1_GSE31477 		0.836 0.730
ATF1
M09956_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF1_Q3 		0.836 0.730
ATF1
M09957_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF1_Q6_01 		0.836 0.730
ATF1
M09958_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF1_Q6 		0.836 0.730
Crem
M01821_2.00 		Mus musculus
NRTKACGTMN
NKACGTMAYN		 PBM
Weirauch et al.(2014)
pTH5002 		0.833 0.714
Crem
M08845_2.00 		Mus musculus
SVVTGACGTSA
TSACGTCABBS		 Misc
Kulakovskiy et al.(2013)
CREM_MOUSE.H11MO.0.C 		0.833 0.714
CrebB-17A
M03659_2.00 		Drosophila melanogaster
RTGACGTCAY
RTGACGTCAY		 SELEX
Nitta et al.(2015)
CrebB-17A_1 		0.827 0.730
CrebB-17A
M03660_2.00 		Drosophila melanogaster
RTGACGTCAY
RTGACGTCAY		 SELEX
Nitta et al.(2015)
CrebB-17A_2 		0.827 0.730
Atf1
M00124_2.00 		Mus musculus
NNNNDNDNNN
NNNHNHNNNN		 PBM
Badis et al.(2009)
Atf1_3026 		0.825 0.714
Atf1
M01804_2.00 		Mus musculus
RTGACGTV
BACGTCAY		 PBM
Weirauch et al.(2014)
pTH5005 		0.825 0.714
Atf1
M08820_2.00 		Mus musculus
VTGACGTSAV
BTSACGTCAB		 Misc
Kulakovskiy et al.(2013)
ATF1_MOUSE.H11MO.0.B 		0.825 0.714
CREM
M04229_2.00 		Homo sapiens
VVTBACGTVABN
NVTBACGTVABB		 SELEX
Yin et al.(2017)
CREM_eDBD_HT-SELEX 		0.822 0.651
CREM
M08784_2.00 		Homo sapiens
SVVTGACGTSA
TSACGTCABBS		 Misc
Kulakovskiy et al.(2013)
CREM_HUMAN.H11MO.0.C 		0.822 0.651
CREM
M09930_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CREM_Q6_01 		0.822 0.651
CREM
M09931_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CREM_Q6 		0.822 0.651
CREM
M04230_2.00 		Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN		 SELEX
Yin et al.(2017)
CREM_eDBD_Methyl-HT-SELEX 		0.822 0.651
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMUV_0000993401-mRNA-1 bZIP 195 257

Links

Other bZIP family TFs
Other Syphacia muris TFs

357 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_027_00068 Aquilegia coerulea Aquca_027_00068 I
Al_scaffold_0003_569 Arabidopsis lyrata Al_scaffold_0003_569 I
AT3G05860 Arabidopsis thaliana AT3G05860 I
AGL80 Arabidopsis thaliana AT5G48670 D
Bostr.2392s0039 Boechera stricta Bostr.2392s0039 I
Bostr.2570s0082 Boechera stricta Bostr.2570s0082 I
Bostr.2570s0083 Boechera stricta Bostr.2570s0083 I
Bo2g104810 Brassica oleracea Bo2g104810 I
Bo5g145000 Brassica oleracea Bo5g145000 I
Bo9g078450 Brassica oleracea Bo9g078450 I
Bra018490 Brassica rapa Bra018490 I
Bra029469 Brassica rapa Bra029469 I
Bra041022 Brassica rapa Bra041022 I
Cagra.1772s0003 Capsella grandiflora Cagra.1772s0003 I
Carubv10014232m.g Capsella rubella Carubv10014232m.g I
evm.TU.contig_25049.1 Carica papaya evm.TU.contig_25049.1 I
evm.TU.contig_25049.5 Carica papaya evm.TU.contig_25049.5 I
evm.TU.contig_25253.5 Carica papaya evm.TU.contig_25253.5 I
evm.TU.contig_25982.2 Carica papaya evm.TU.contig_25982.2 I
evm.TU.contig_26058.1 Carica papaya evm.TU.contig_26058.1 I
evm.TU.contig_26058.2 Carica papaya evm.TU.contig_26058.2 I
evm.TU.contig_27586 Carica papaya evm.TU.contig_27586 I
evm.TU.contig_28448.4 Carica papaya evm.TU.contig_28448.4 I
evm.TU.contig_32899.1 Carica papaya evm.TU.contig_32899.1 I
evm.TU.contig_33457.2 Carica papaya evm.TU.contig_33457.2 I
evm.TU.contig_36181 Carica papaya evm.TU.contig_36181 I
evm.TU.contig_38146 Carica papaya evm.TU.contig_38146 I
evm.TU.contig_40008 Carica papaya evm.TU.contig_40008 I
evm.TU.contig_40499.2 Carica papaya evm.TU.contig_40499.2 I
evm.TU.contig_44957 Carica papaya evm.TU.contig_44957 I
evm.TU.supercontig_117.18 Carica papaya evm.TU.supercontig_117.18 I
evm.TU.supercontig_117.19 Carica papaya evm.TU.supercontig_117.19 I
evm.TU.supercontig_118.30 Carica papaya evm.TU.supercontig_118.30 I
evm.TU.supercontig_1237.1 Carica papaya evm.TU.supercontig_1237.1 I
evm.TU.supercontig_139.40 Carica papaya evm.TU.supercontig_139.40 I
evm.TU.supercontig_1750.2 Carica papaya evm.TU.supercontig_1750.2 I
evm.TU.supercontig_185.11 Carica papaya evm.TU.supercontig_185.11 I
evm.TU.supercontig_185.7 Carica papaya evm.TU.supercontig_185.7 I
evm.TU.supercontig_185.9 Carica papaya evm.TU.supercontig_185.9 I
evm.TU.supercontig_265.1 Carica papaya evm.TU.supercontig_265.1 I
evm.TU.supercontig_30.166 Carica papaya evm.TU.supercontig_30.166 I
Ca_06495 Cicer arietinum Ca_06495 I
Ca_08934 Cicer arietinum Ca_08934 I
Ca_13275 Cicer arietinum Ca_13275 I
Cla005226 Citrullus lanatus Cla005226 I
Cla009163 Citrullus lanatus Cla009163 I
Ciclev10006519m.g Citrus clementina Ciclev10006519m.g I
Ciclev10013728m.g Citrus clementina Ciclev10013728m.g I
Ciclev10024463m.g Citrus clementina Ciclev10024463m.g I
orange1.1g040642m.g Citrus sinensis orange1.1g040642m.g I
Cucsa.050930 Cucumis sativus Cucsa.050930 I
Eucgr.B01824 Eucalyptus grandis Eucgr.B01824 I
Eucgr.E01733 Eucalyptus grandis Eucgr.E01733 I
Eucgr.E01734 Eucalyptus grandis Eucgr.E01734 I
Eucgr.E01736 Eucalyptus grandis Eucgr.E01736 I
Eucgr.E01737 Eucalyptus grandis Eucgr.E01737 I
Thhalv10002346m.g Eutrema salsugineum Thhalv10002346m.g I
Thhalv10002349m.g Eutrema salsugineum Thhalv10002349m.g I
Thhalv10002350m.g Eutrema salsugineum Thhalv10002350m.g I
Thhalv10002352m.g Eutrema salsugineum Thhalv10002352m.g I
Thhalv10002353m.g Eutrema salsugineum Thhalv10002353m.g I
Thhalv10002789m.g Eutrema salsugineum Thhalv10002789m.g I
Thhalv10002956m.g Eutrema salsugineum Thhalv10002956m.g I
Thhalv10002996m.g Eutrema salsugineum Thhalv10002996m.g I
Thhalv10012000m.g Eutrema salsugineum Thhalv10012000m.g I
Thhalv10019449m.g Eutrema salsugineum Thhalv10019449m.g I
Thhalv10019451m.g Eutrema salsugineum Thhalv10019451m.g I
Thhalv10019481m.g Eutrema salsugineum Thhalv10019481m.g I
Thhalv10019516m.g Eutrema salsugineum Thhalv10019516m.g I
Thhalv10019579m.g Eutrema salsugineum Thhalv10019579m.g I
Thhalv10019681m.g Eutrema salsugineum Thhalv10019681m.g I
Thhalv10019731m.g Eutrema salsugineum Thhalv10019731m.g I
Thhalv10019751m.g Eutrema salsugineum Thhalv10019751m.g I
Thhalv10019758m.g Eutrema salsugineum Thhalv10019758m.g N
Thhalv10019810m.g Eutrema salsugineum Thhalv10019810m.g I
Thhalv10019833m.g Eutrema salsugineum Thhalv10019833m.g I
Thhalv10022373m.g Eutrema salsugineum Thhalv10022373m.g I
Thhalv10023873m.g Eutrema salsugineum Thhalv10023873m.g I
Thhalv10024162m.g Eutrema salsugineum Thhalv10024162m.g I
gene04949-v1.0-hybrid Fragaria vesca gene04949-v1.0-hybrid I
gene18029-v1.0-hybrid Fragaria vesca gene18029-v1.0-hybrid I
gene22916-v1.0-hybrid Fragaria vesca gene22916-v1.0-hybrid I
gene22967-v1.0-hybrid Fragaria vesca gene22967-v1.0-hybrid I
gene23924-v1.0-hybrid Fragaria vesca gene23924-v1.0-hybrid I
GLYMA11G33460 Glycine max GLYMA11G33460 I
GLYMA18G04760 Glycine max GLYMA18G04760 I
Gorai.004G292000 Gossypium raimondii Gorai.004G292000 I
Gorai.013G210200 Gossypium raimondii Gorai.013G210200 I
Gorai.013G210400 Gossypium raimondii Gorai.013G210400 I
Lus10014578.g Linum usitatissimum Lus10014578.g I
Lus10014883.g Linum usitatissimum Lus10014883.g I
Lus10022316.g Linum usitatissimum Lus10022316.g I
Lus10032108.g Linum usitatissimum Lus10032108.g I
chr6.LjT19B22.120.nd Lotus japonicus chr6.LjT19B22.120.nd I
LjSGA_018236.1 Lotus japonicus LjSGA_018236.1 I
LjSGA_042497.2 Lotus japonicus LjSGA_042497.2 I
LjSGA_057783.1 Lotus japonicus LjSGA_057783.1 I
LjSGA_102554.1 Lotus japonicus LjSGA_102554.1 I
LjSGA_107301.1 Lotus japonicus LjSGA_107301.1 I
LjSGA_126766.1 Lotus japonicus LjSGA_126766.1 I
LjSGA_147985.1 Lotus japonicus LjSGA_147985.1 I
LjT40B16.70.nc Lotus japonicus LjT40B16.70.nc I
MDP0000846004 Malus domestica MDP0000846004 I
MDP0000925348 Malus domestica MDP0000925348 I
cassava15247.m1 Manihot esculenta cassava15247.m1 I
cassava19828.m1 Manihot esculenta cassava19828.m1 I
MTR_3g065100 Medicago truncatula MTR_3g065100 I
mgf026186m Mimulus guttatus mgf026186m I
GSMUA_Achr2G18410_001 Musa acuminata GSMUA_Achr2G18410_001 N
POPTR_0005s00420 Populus trichocarpa POPTR_0005s00420 I
POPTR_0013s00350 Populus trichocarpa POPTR_0013s00350 I
POPTR_0013s01880 Populus trichocarpa POPTR_0013s01880 I
Pm003257 Prunus mume Pm003257 I
Pm003258 Prunus mume Pm003258 N
Pm004396 Prunus mume Pm004396 I
PRUPE_ppa018168mg Prunus persica PRUPE_ppa018168mg I
PRUPE_ppa019749mg Prunus persica PRUPE_ppa019749mg I
30128.m008984 Ricinus communis 30128.m008984 I
30199.m000879 Ricinus communis 30199.m000879 I
SapurV1A.0066s0310 Salix purpurea SapurV1A.0066s0310 I
SapurV1A.0442s0180 Salix purpurea SapurV1A.0442s0180 I
SapurV1A.0442s0190 Salix purpurea SapurV1A.0442s0190 I
Solyc01g102260.2 Solanum lycopersicum Solyc01g102260.2 I
TCM_025670 Theobroma cacao TCM_025670 I
TCM_025671 Theobroma cacao TCM_025671 I
TCM_026842 Theobroma cacao TCM_026842 I
TCM_026845 Theobroma cacao TCM_026845 I
TCM_042799 Theobroma cacao TCM_042799 I
VIT_14s0060g00300 Vitis vinifera VIT_14s0060g00300 I