Eucgr.B03500 (Eucalyptus grandis)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03110 (SBP) IPR004333 Eucgr.B03500 T323451_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPL10
M01084_2.00 		Arabidopsis thaliana
NNGTACGRHN
NDYCGTACNN		 PBM
Sullivan et al.(2014)
pTH9749 		0.943 0.867
SPL11
M02471_2.00 		Arabidopsis thaliana
NNNHGTACGGWN
NWCCGTACDNNN		 PBM
Weirauch et al.(2014)
pTH9392 		0.898 0.853
SPL11
M07254_2.00 		Arabidopsis thaliana
HTGTACTDDHH
DDHHAGTACAD		 Dap-seq
OMalley et al.(2016)
SPL11_col100_a 		0.898 0.853
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.B03500.1 SBP 188 262

Links

Other SBP family TFs
Other Eucalyptus grandis TFs

120 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_007_00647 Aquilegia coerulea Aquca_007_00647 I 0.000
Aquca_027_00068 Aquilegia coerulea Aquca_027_00068 I 0.000
Al_scaffold_0003_569 Arabidopsis lyrata Al_scaffold_0003_569 I 0.000
AGL80 Arabidopsis thaliana AT5G48670 D 0.000
Bostr.2392s0039 Boechera stricta Bostr.2392s0039 I 0.000
Bostr.2570s0082 Boechera stricta Bostr.2570s0082 I 0.000
Bo2g104810 Brassica oleracea Bo2g104810 I 0.000
Bo5g145000 Brassica oleracea Bo5g145000 I 0.000
Bo9g078450 Brassica oleracea Bo9g078450 I 0.000
Bra018490 Brassica rapa Bra018490 I 0.000
Bra029469 Brassica rapa Bra029469 I 0.000
Bra041022 Brassica rapa Bra041022 I 0.000
Cagra.1772s0003 Capsella grandiflora Cagra.1772s0003 I 0.000
Carubv10014232m.g Capsella rubella Carubv10014232m.g I 0.000
evm.TU.contig_24608 Carica papaya evm.TU.contig_24608 I 0.000
evm.TU.contig_25049.1 Carica papaya evm.TU.contig_25049.1 I 0.000
evm.TU.contig_25049.5 Carica papaya evm.TU.contig_25049.5 I 0.000
evm.TU.contig_25982.2 Carica papaya evm.TU.contig_25982.2 I 0.000
evm.TU.contig_26058.1 Carica papaya evm.TU.contig_26058.1 I 0.000
evm.TU.contig_26058.2 Carica papaya evm.TU.contig_26058.2 I 0.000
evm.TU.contig_27586 Carica papaya evm.TU.contig_27586 I 0.000
evm.TU.contig_28448.4 Carica papaya evm.TU.contig_28448.4 I 0.000
evm.TU.contig_31147 Carica papaya evm.TU.contig_31147 I 0.000
evm.TU.contig_33457.2 Carica papaya evm.TU.contig_33457.2 I 0.000
evm.TU.contig_35009 Carica papaya evm.TU.contig_35009 I 0.000
evm.TU.contig_36181 Carica papaya evm.TU.contig_36181 I 0.000
evm.TU.contig_38146 Carica papaya evm.TU.contig_38146 I 0.000
evm.TU.contig_40485 Carica papaya evm.TU.contig_40485 I 0.000
evm.TU.contig_40499.2 Carica papaya evm.TU.contig_40499.2 I 0.000
evm.TU.contig_44957 Carica papaya evm.TU.contig_44957 I 0.000
evm.TU.supercontig_117.18 Carica papaya evm.TU.supercontig_117.18 I 0.000
evm.TU.supercontig_117.19 Carica papaya evm.TU.supercontig_117.19 I 0.000
evm.TU.supercontig_118.30 Carica papaya evm.TU.supercontig_118.30 I 0.000
evm.TU.supercontig_1237.1 Carica papaya evm.TU.supercontig_1237.1 I 0.000
evm.TU.supercontig_1750.2 Carica papaya evm.TU.supercontig_1750.2 I 0.000
evm.TU.supercontig_185.11 Carica papaya evm.TU.supercontig_185.11 I 0.000
evm.TU.supercontig_185.2 Carica papaya evm.TU.supercontig_185.2 I 0.000
evm.TU.supercontig_185.9 Carica papaya evm.TU.supercontig_185.9 I 0.000
evm.TU.supercontig_265.1 Carica papaya evm.TU.supercontig_265.1 I 0.000
evm.TU.supercontig_265.6 Carica papaya evm.TU.supercontig_265.6 N 0.000
evm.TU.supercontig_30.166 Carica papaya evm.TU.supercontig_30.166 I 0.000
Ca_06495 Cicer arietinum Ca_06495 I 0.000
Ca_08934 Cicer arietinum Ca_08934 I 0.000
Ca_13275 Cicer arietinum Ca_13275 I 0.000
Cla005226 Citrullus lanatus Cla005226 I 0.000
Cla009163 Citrullus lanatus Cla009163 I 0.000
Ciclev10006519m.g Citrus clementina Ciclev10006519m.g I 0.000
Ciclev10013728m.g Citrus clementina Ciclev10013728m.g I 0.000
Ciclev10024463m.g Citrus clementina Ciclev10024463m.g I 0.000
orange1.1g040642m.g Citrus sinensis orange1.1g040642m.g I 0.000
Cucsa.050930 Cucumis sativus Cucsa.050930 I 0.000
Eucgr.B01824 Eucalyptus grandis Eucgr.B01824 I 0.000
Eucgr.E01733 Eucalyptus grandis Eucgr.E01733 I 0.000
Eucgr.E01734 Eucalyptus grandis Eucgr.E01734 I 0.000
Eucgr.E01736 Eucalyptus grandis Eucgr.E01736 I 0.000
Eucgr.E01737 Eucalyptus grandis Eucgr.E01737 I 0.000
Thhalv10002352m.g Eutrema salsugineum Thhalv10002352m.g I 0.000
Thhalv10012000m.g Eutrema salsugineum Thhalv10012000m.g I 0.000
Thhalv10019481m.g Eutrema salsugineum Thhalv10019481m.g I 0.000
Thhalv10022373m.g Eutrema salsugineum Thhalv10022373m.g I 0.000
Thhalv10023873m.g Eutrema salsugineum Thhalv10023873m.g I 0.000
Thhalv10024119m.g Eutrema salsugineum Thhalv10024119m.g I 0.000
Thhalv10024162m.g Eutrema salsugineum Thhalv10024162m.g I 0.000
gene15899-v1.0-hybrid Fragaria vesca gene15899-v1.0-hybrid N 0.000
gene18029-v1.0-hybrid Fragaria vesca gene18029-v1.0-hybrid I 0.000
gene22916-v1.0-hybrid Fragaria vesca gene22916-v1.0-hybrid I 0.000
gene22967-v1.0-hybrid Fragaria vesca gene22967-v1.0-hybrid I 0.000
gene23924-v1.0-hybrid Fragaria vesca gene23924-v1.0-hybrid I 0.000
GLYMA11G30640 Glycine max GLYMA11G30640 N 0.000
GLYMA11G33460 Glycine max GLYMA11G33460 I 0.000
GLYMA18G05916 Glycine max GLYMA18G05916 N 0.000
GLYMA18G05990 Glycine max GLYMA18G05990 N 0.000
Gorai.004G054700 Gossypium raimondii Gorai.004G054700 N 0.000
Gorai.004G229700 Gossypium raimondii Gorai.004G229700 N 0.000
Gorai.004G292000 Gossypium raimondii Gorai.004G292000 I 0.000
Gorai.013G210200 Gossypium raimondii Gorai.013G210200 I 0.000
Lus10014578.g Linum usitatissimum Lus10014578.g I 0.000
Lus10014883.g Linum usitatissimum Lus10014883.g I 0.000
Lus10022316.g Linum usitatissimum Lus10022316.g I 0.000
Lus10032108.g Linum usitatissimum Lus10032108.g I 0.000
chr6.LjT19B22.120.nd Lotus japonicus chr6.LjT19B22.120.nd I 0.000
LjSGA_018236.1 Lotus japonicus LjSGA_018236.1 I 0.000
LjSGA_057783.1 Lotus japonicus LjSGA_057783.1 I 0.000
LjSGA_107301.1 Lotus japonicus LjSGA_107301.1 I 0.000
LjSGA_126766.1 Lotus japonicus LjSGA_126766.1 I 0.000
LjSGA_147985.1 Lotus japonicus LjSGA_147985.1 I 0.000
LjT40B16.70.nc Lotus japonicus LjT40B16.70.nc I 0.000
MDP0000846004 Malus domestica MDP0000846004 I 0.000
MDP0000925348 Malus domestica MDP0000925348 I 0.000
cassava15247.m1 Manihot esculenta cassava15247.m1 I 0.000
cassava19828.m1 Manihot esculenta cassava19828.m1 I 0.000
MTR_2g035610 Medicago truncatula MTR_2g035610 N 0.000
MTR_3g065100 Medicago truncatula MTR_3g065100 I 0.000
MTR_4g031910 Medicago truncatula MTR_4g031910 N 0.000
MTR_4g032260 Medicago truncatula MTR_4g032260 N 0.000
MTR_8g036130 Medicago truncatula MTR_8g036130 N 0.000
mgf026186m Mimulus guttatus mgf026186m I 0.000
GSMUA_Achr2G18400_001 Musa acuminata GSMUA_Achr2G18400_001 N 0.000
GSMUA_Achr2G18410_001 Musa acuminata GSMUA_Achr2G18410_001 N 0.000
GSMUA_Achr3G05500_001 Musa acuminata GSMUA_Achr3G05500_001 I 0.000
GSMUA_Achr3G08500_001 Musa acuminata GSMUA_Achr3G08500_001 N 0.000
PDK_20s1688321g001 Phoenix dactylifera PDK_20s1688321g001 N 0.000
POPTR_0005s00420 Populus trichocarpa POPTR_0005s00420 I 0.000
POPTR_0013s00350 Populus trichocarpa POPTR_0013s00350 I 0.000
POPTR_0013s01880 Populus trichocarpa POPTR_0013s01880 I 0.000
Pm003257 Prunus mume Pm003257 I 0.000
Pm004396 Prunus mume Pm004396 I 0.000
PRUPE_ppa018168mg Prunus persica PRUPE_ppa018168mg I 0.000
PRUPE_ppa019749mg Prunus persica PRUPE_ppa019749mg I 0.000
30128.m008984 Ricinus communis 30128.m008984 I 0.000
30199.m000879 Ricinus communis 30199.m000879 I 0.000
SapurV1A.0066s0310 Salix purpurea SapurV1A.0066s0310 I 0.000
SapurV1A.0442s0180 Salix purpurea SapurV1A.0442s0180 I 0.000
SapurV1A.0442s0190 Salix purpurea SapurV1A.0442s0190 I 0.000
Solyc01g102260.2 Solanum lycopersicum Solyc01g102260.2 I 0.000
TCM_025670 Theobroma cacao TCM_025670 I 0.000
TCM_025671 Theobroma cacao TCM_025671 I 0.000
TCM_026842 Theobroma cacao TCM_026842 I 0.000
TCM_026845 Theobroma cacao TCM_026845 I 0.000
TCM_042799 Theobroma cacao TCM_042799 I 0.000
VIT_14s0060g00300 Vitis vinifera VIT_14s0060g00300 I 0.000