Si008104m.g (Setaria italica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Si008104m.g T005251_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF018
M00842_2.00 		Arabidopsis thaliana
HRCCGDCMN
NKGHCGGYD		 PBM
Franco-Zorrilla et al.(2014)
ORA47 		0.740 0.880
ERF018
M01610_2.00 		Arabidopsis thaliana
NRCCGNCHN
NDGNCGGYN		 PBM
Weirauch et al.(2014)
pTH7215 		0.740 0.880
ERF017
M06568_2.00 		Arabidopsis thaliana
NHNYCRCCGWCMWH
DWKGWCGGYGRNDN		 Dap-seq
OMalley et al.(2016)
At1g19210_col_a 		0.737 0.860
ERF017
M06569_2.00 		Arabidopsis thaliana
NNNHNNCRCCGWCMW
WKGWCGGYGNNDNNN		 Dap-seq
OMalley et al.(2016)
At1g19210_colamp_a 		0.737 0.860
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Si008104m AP2 11 62

Links

Other AP2 family TFs
Other Setaria italica TFs

160 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Solyc06g054630.1 Solanum lycopersicum Solyc06g054630.1 I 0.771
PGSC0003DMG400030781 Solanum tuberosum PGSC0003DMG400030781 I 0.771
MTR_3g105510 Medicago truncatula MTR_3g105510 I 0.762
MTR_3g105480 Medicago truncatula MTR_3g105480 I 0.762
Eucgr.C03175 Eucalyptus grandis Eucgr.C03175 I 0.756
GSMUA_Achr9G14360_001 Musa acuminata GSMUA_Achr9G14360_001 I 0.749
evm.TU.supercontig_266.5 Carica papaya evm.TU.supercontig_266.5 I 0.746
mgf021940m Mimulus guttatus mgf021940m I 0.742
Bo8g102870 Brassica oleracea Bo8g102870 I 0.741
ONIVA06G07190 Oryza nivara ONIVA06G07190 I 0.741
OMERI03G32210 Oryza meridionalis OMERI03G32210 I 0.741
OBART06G06190 Oryza barthii OBART06G06190 I 0.741
Traes_6DL_FA861D610 Triticum aestivum Traes_6DL_FA861D610 I 0.741
ORGLA06G0057200 Oryza glaberrima ORGLA06G0057200 I 0.741
OGLUM06G06520 Oryza glumaepatula OGLUM06G06520 I 0.741
Bra031069 Brassica rapa Bra031069 I 0.741
Bostr.3288s0141 Boechera stricta Bostr.3288s0141 I 0.740
ORA47 Arabidopsis lyrata fgenesh2_kg.2__1761__AT1G74930.1 I 0.740
Eucgr.C03297 Eucalyptus grandis Eucgr.C03297 I 0.740
Si019636m.g Setaria italica Si019636m.g I 0.740
Pavir.Aa00296 Panicum virgatum Pavir.Aa00296 I 0.740
ERF018 Arabidopsis thaliana AT1G74930 D 0.740
Thhalv10009812m.g Eutrema salsugineum Thhalv10009812m.g I 0.740
ORA47 Vitis vinifera VIT_04s0008g02230 I 0.740
OB08G24280 Oryza brachyantha OB08G24280 I 0.739
BGIOSGA028781 Oryza indica BGIOSGA028781 I 0.739
ORUFI08G18850 Oryza rufipogon ORUFI08G18850 I 0.739
OS08G0454000 Oryza sativa OS08G0454000 I 0.739
ONIVA08G18470 Oryza nivara ONIVA08G18470 I 0.739
OBART08G16950 Oryza barthii OBART08G16950 I 0.739
OGLUM08G17690 Oryza glumaepatula OGLUM08G17690 I 0.739
OPUNC08G14840 Oryza punctata OPUNC08G14840 I 0.739
Pavir.Fb01602 Panicum virgatum Pavir.Fb01602 I 0.739
GRMZM2G163745 Zea mays GRMZM2G163745 I 0.739
LPERR08G14000 Leersia perrieri LPERR08G14000 I 0.739
Pavir.Fa00741 Panicum virgatum Pavir.Fa00741 I 0.739
Si015027m.g Setaria italica Si015027m.g I 0.739
ORUFI06G06480 Oryza rufipogon ORUFI06G06480 I 0.738
BGIOSGA022471 Oryza indica BGIOSGA022471 I 0.738
fgenesh2_kg.1__2098__AT1G19210.1 Arabidopsis lyrata fgenesh2_kg.1__2098__AT1G19210.1 I 0.737
POPTR_0006s23480 Populus trichocarpa POPTR_0006s23480 I 0.737
gene12919-v1.0-hybrid Fragaria vesca gene12919-v1.0-hybrid I 0.737
Cagra.1961s0079 Capsella grandiflora Cagra.1961s0079 I 0.737
ERF017 Arabidopsis thaliana AT1G19210 D 0.737
SapurV1A.2229s0010 Salix purpurea SapurV1A.2229s0010 I 0.737
Carubv10011394m.g Capsella rubella Carubv10011394m.g I 0.737
Bo6g119120 Brassica oleracea Bo6g119120 I 0.737
SapurV1A.0373s0040 Salix purpurea SapurV1A.0373s0040 I 0.737
mgf024162m Mimulus guttatus mgf024162m I 0.736
SapurV1A.0057s0300 Salix purpurea SapurV1A.0057s0300 I 0.735
cassava10604.m1 Manihot esculenta cassava10604.m1 I 0.734
Bra003780 Brassica rapa Bra003780 I 0.733
TRAES3BF084200010CFD_g Triticum aestivum TRAES3BF084200010CFD_g I 0.733
Carubv10020965m.g Capsella rubella Carubv10020965m.g I 0.732
Bo6g086740 Brassica oleracea Bo6g086740 I 0.732
Bra015882 Brassica rapa Bra015882 I 0.732
Cagra.0402s0035 Capsella grandiflora Cagra.0402s0035 I 0.732
Pavir.J00593 Panicum virgatum Pavir.J00593 I 0.731
Lus10038082.g Linum usitatissimum Lus10038082.g I 0.731
Lus10009798.g Linum usitatissimum Lus10009798.g I 0.731
TCM_037486 Theobroma cacao TCM_037486 I 0.730
F775_23111 Aegilops tauschii F775_23111 I 0.730
BRADI3G37544 Brachypodium distachyon BRADI3G37544 I 0.730
Aquca_076_00039 Aquilegia coerulea Aquca_076_00039 I 0.729
Lus10034885.g Linum usitatissimum Lus10034885.g I 0.728
MTR_1g014800 Medicago truncatula MTR_1g014800 I 0.728
Lus10033420.g Linum usitatissimum Lus10033420.g I 0.728
MDP0000704216 Malus domestica MDP0000704216 I 0.727
AMTR_s00007p00268280 Amborella trichopoda AMTR_s00007p00268280 I 0.727
Ciclev10010348m.g Citrus clementina Ciclev10010348m.g I 0.726
VIT_11s0016g00660 Vitis vinifera VIT_11s0016g00660 I 0.726
cassava20547.m1 Manihot esculenta cassava20547.m1 I 0.725
POPTR_0006s14100 Populus trichocarpa POPTR_0006s14100 I 0.725
Eucgr.C00780 Eucalyptus grandis Eucgr.C00780 I 0.725
cassava25057.valid.m1 Manihot esculenta cassava25057.valid.m1 I 0.725
GRMZM2G097081 Zea mays GRMZM2G097081 I 0.725
29739.m003716 Ricinus communis 29739.m003716 I 0.724
PRUPE_ppa011336mg Prunus persica PRUPE_ppa011336mg I 0.724
Pm027117 Prunus mume Pm027117 I 0.724
Bo8g068370 Brassica oleracea Bo8g068370 I 0.723
Bra016518 Brassica rapa Bra016518 I 0.723
Gorai.001G019100 Gossypium raimondii Gorai.001G019100 I 0.722
TCM_037415 Theobroma cacao TCM_037415 I 0.722
Cucsa.271180 Cucumis sativus Cucsa.271180 I 0.721
POPTR_0018s08320 Populus trichocarpa POPTR_0018s08320 I 0.721
MTR_1g014820 Medicago truncatula MTR_1g014820 I 0.721
Thhalv10019652m.g Eutrema salsugineum Thhalv10019652m.g I 0.721
Cla007584 Citrullus lanatus Cla007584 I 0.721
MDP0000649022 Malus domestica MDP0000649022 I 0.721
MTR_1g014860 Medicago truncatula MTR_1g014860 I 0.721
mgf025452m Mimulus guttatus mgf025452m I 0.720
Ca_09124 Cicer arietinum Ca_09124 I 0.719
POPTR_0006s14090 Populus trichocarpa POPTR_0006s14090 I 0.719
Gorai.004G285900 Gossypium raimondii Gorai.004G285900 I 0.719
Gorai.001G016800 Gossypium raimondii Gorai.001G016800 I 0.718
LPERR02G28660 Leersia perrieri LPERR02G28660 I 0.718
OGLUM06G08330 Oryza glumaepatula OGLUM06G08330 N 0.717
OMERI06G09430 Oryza meridionalis OMERI06G09430 N 0.717
orange1.1g029068m.g Citrus sinensis orange1.1g029068m.g I 0.717
SapurV1A.0521s0050 Salix purpurea SapurV1A.0521s0050 I 0.717
Ciclev10009540m.g Citrus clementina Ciclev10009540m.g I 0.717
Cla011318 Citrullus lanatus Cla011318 I 0.716
Cucsa.141980 Cucumis sativus Cucsa.141980 I 0.716
Gorai.010G091100 Gossypium raimondii Gorai.010G091100 I 0.716
Pavir.Da01882 Panicum virgatum Pavir.Da01882 N 0.716
Gorai.013G222700 Gossypium raimondii Gorai.013G222700 I 0.716
chr5.CM0040.40.nd Lotus japonicus chr5.CM0040.40.nd I 0.716
29739.m003647 Ricinus communis 29739.m003647 I 0.715
GLYMA17G05240 Glycine max GLYMA17G05240 I 0.713
Bostr.7128s0526 Boechera stricta Bostr.7128s0526 I 0.712
OPUNC06G07550 Oryza punctata OPUNC06G07550 N 0.711
GLYMA13G17250 Glycine max GLYMA13G17250 I 0.711
GSMUA_AchrUn_randomG02200_001 Musa acuminata GSMUA_AchrUn_randomG02200_001 I 0.708
PGSC0003DMG400002899 Solanum tuberosum PGSC0003DMG400002899 I 0.707
Solyc12g009240.1 Solanum lycopersicum Solyc12g009240.1 I 0.707
GSMUA_Achr5G05160_001 Musa acuminata GSMUA_Achr5G05160_001 I 0.706
GLYMA17G33535 Glycine max GLYMA17G33535 I 0.705
Bra025719 Brassica rapa Bra025719 I 0.705
Sb07g022265 Sorghum bicolor Sb07g022265 I 0.704
OS02G0781300 Oryza sativa OS02G0781300 I 0.703
OPUNC02G32160 Oryza punctata OPUNC02G32160 I 0.703
ORGLA02G0301600 Oryza glaberrima ORGLA02G0301600 I 0.703
ONIVA02G36910 Oryza nivara ONIVA02G36910 I 0.703
OGLUM02G35980 Oryza glumaepatula OGLUM02G35980 I 0.703
BGIOSGA005486 Oryza indica BGIOSGA005486 I 0.703
ORUFI02G36340 Oryza rufipogon ORUFI02G36340 I 0.703
OMERI01G37050 Oryza meridionalis OMERI01G37050 I 0.703
Ca_01683 Cicer arietinum Ca_01683 I 0.701
GLYMA06G06101 Glycine max GLYMA06G06101 I 0.701
GLYMA04G06095 Glycine max GLYMA04G06095 I 0.701
Bra020162 Brassica rapa Bra020162 I 0.700
PK18548.1 Cannabis sativa PK18548.1 I 0.698
GLYMA14G12505 Glycine max GLYMA14G12505 I 0.697
GLYMA09G08330 Glycine max GLYMA09G08330 I 0.695
Cla022291 Citrullus lanatus Cla022291 I 0.693
Cucsa.055920 Cucumis sativus Cucsa.055920 I 0.693
Bo2g023630 Brassica oleracea Bo2g023630 I 0.692
GLYMA15G19910 Glycine max GLYMA15G19910 I 0.692
Traes_6AL_E6DAE246D Triticum aestivum Traes_6AL_E6DAE246D I 0.691
ORUFI06G08090 Oryza rufipogon ORUFI06G08090 N 0.690
AMTR_s00007p00268460 Amborella trichopoda AMTR_s00007p00268460 I 0.690
ONIVA06G09060 Oryza nivara ONIVA06G09060 N 0.690
ONIVA06G07220 Oryza nivara ONIVA06G07220 N 0.690
OGLUM06G06550 Oryza glumaepatula OGLUM06G06550 N 0.689
MTR_2g043050 Medicago truncatula MTR_2g043050 I 0.689
ORGLA06G0057300 Oryza glaberrima ORGLA06G0057300 N 0.688
OMERI03G32220 Oryza meridionalis OMERI03G32220 N 0.688
OBART06G06220 Oryza barthii OBART06G06220 N 0.688
OBART06G06230 Oryza barthii OBART06G06230 N 0.686
ORGLA06G0057400 Oryza glaberrima ORGLA06G0057400 N 0.686
scaffold_602234.1 Arabidopsis lyrata scaffold_602234.1 I 0.685
Carubv10001903m.g Capsella rubella Carubv10001903m.g I 0.685
Bo9g149820 Brassica oleracea Bo9g149820 I 0.685
Bostr.26527s0082 Boechera stricta Bostr.26527s0082 I 0.685
Bra002377 Brassica rapa Bra002377 I 0.685
Thhalv10015465m.g Eutrema salsugineum Thhalv10015465m.g I 0.682
OGLUM06G06540 Oryza glumaepatula OGLUM06G06540 N 0.680
ERF016 Arabidopsis thaliana AT5G21960 I 0.679
Bra006599 Brassica rapa Bra006599 I 0.677
Bo3g015600 Brassica oleracea Bo3g015600 I 0.677