CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GG17338
(
Drosophila erecta
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00250 (Forkhead)
IPR001766
FBgn0109565
T187449_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FOXP1
M00836_2.00
Homo sapiens
NRTMAACANN
NNTGTTKAYN
PBM
Gabut et al.(2011)
pEX0123
0.672
0.787
FOXP1
M00837_2.00
Homo sapiens
DGTAAACAA
TTGTTTACH
PBM
Gabut et al.(2011)
pEX0124
0.672
0.787
FOXP1
M01976_2.00
Homo sapiens
RTAAACAA
TTGTTTAY
PBM
Weirauch et al.(2014)
pTH5656
0.672
0.787
Foxp1
M00793_2.00
Mus musculus
NRTMAAYAN
NTRTTKAYN
PBM
Weirauch et al.(2013)
pTH3855
0.672
0.787
FOXP1
M04811_2.00
Homo sapiens
NTGTTTRYNRTNNNNNNBNAYRVWMAACAN
NTGTTKWBYRTNVNNNNNNAYNRYAAACAN
SELEX
Yin et al.(2017)
FOXP1_eDBD_HT-SELEX
0.672
0.787
FOXP1
M08115_2.00
Homo sapiens
NDGTAAACAVNN
NNBTGTTTACHN
ChIP-seq
Mathelier et al.(2014)
MA0481.2
0.672
0.787
FOXP1
M09086_2.00
Homo sapiens
RKAAACAVM
KBTGTTTMY
Misc
Kulakovskiy et al.(2013)
FOXP1_HUMAN.H11MO.0.A
0.672
0.787
FOXP1
M09541_2.00
Homo sapiens
NDGTAAACAVNN
NNBTGTTTACHN
Misc
Heinz et al.(2010)
H9-FOXP1_GSE31006
0.672
0.787
FOXP1
M10536_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXP1_01
0.672
0.787
FOXP1
M04812_2.00
Homo sapiens
NTGTTTRYBRTNNNNNNBNAYRVWMAACAH
DTGTTKWBYRTNVNNNNNNAYVRYAAACAN
SELEX
Yin et al.(2017)
FOXP1_eDBD_Methyl-HT-SELEX
0.672
0.787
Foxp2
M00792_2.00
Mus musculus
RTAAACAD
HTGTTTAY
PBM
Weirauch et al.(2013)
pTH1288
0.671
0.760
FOXP2
M05866_2.00
Homo sapiens
RTAAAYAWNN
NNWTRTTTAY
SMiLE-seq
Isakova et al.(2017)
FOXP2
0.671
0.760
FOXP2
M08116_2.00
Homo sapiens
NDGTAAACAVN
NBTGTTTACHN
ChIP-seq
Mathelier et al.(2014)
MA0593.1
0.671
0.760
FOXP2
M09089_2.00
Homo sapiens
DGTAAACAV
BTGTTTACH
Misc
Kulakovskiy et al.(2013)
FOXP2_HUMAN.H11MO.0.C
0.671
0.760
Foxp2
M09101_2.00
Mus musculus
NGTAAACAN
NTGTTTACN
Misc
Kulakovskiy et al.(2013)
FOXP2_MOUSE.H11MO.0.A
0.671
0.760
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0135884
Forkhead
248
325
GLMCNRAIIDSPDKQLTLNEIYNWFQNTFCYFRRNAATWKNAVRHNLSLHKCFMRVENVKGAVWTVDEIEFYKRRPQR
Links
Other
Forkhead
family TFs
Other
Drosophila erecta
TFs
227 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29738.m001041
Ricinus communis
29738.m001041
I
30167.m000856
Ricinus communis
30167.m000856
I
30174.m008721
Ricinus communis
30174.m008721
I
Aquca_002_01093
Aquilegia coerulea
Aquca_002_01093
I
Aquca_026_00208
Aquilegia coerulea
Aquca_026_00208
I
TCP1
Arabidopsis thaliana
AT1G67260
D
BRC2
Arabidopsis thaliana
AT1G68800
I
BRC1
Arabidopsis thaliana
AT3G18550
I
BGIOSGA028717
Oryza indica
BGIOSGA028717
I
BGIOSGA030744
Oryza indica
BGIOSGA030744
I
Bo1g117490
Brassica oleracea
Bo1g117490
I
Bo2g055640
Brassica oleracea
Bo2g055640
I
Bo2g061250
Brassica oleracea
Bo2g061250
I
Bo3g071560
Brassica oleracea
Bo3g071560
I
Bo5g117410
Brassica oleracea
Bo5g117410
N
Bo6g099040
Brassica oleracea
Bo6g099040
I
Bo6g103670
Brassica oleracea
Bo6g103670
I
Bostr.19424s0807
Boechera stricta
Bostr.19424s0807
I
Bostr.26959s0002
Boechera stricta
Bostr.26959s0002
I
Bostr.26959s0184
Boechera stricta
Bostr.26959s0184
I
Bra001710
Brassica rapa
Bra001710
I
Bra004212
Brassica rapa
Bra004212
I
Bra034010
Brassica rapa
Bra034010
I
Bra037579
Brassica rapa
Bra037579
I
Bra038350
Brassica rapa
Bra038350
I
BRADI3G36590
Brachypodium distachyon
BRADI3G36590
N
BRADI4G29980
Brachypodium distachyon
BRADI4G29980
I
Cagra.1125s0016
Capsella grandiflora
Cagra.1125s0016
I
Cagra.1157s0001
Capsella grandiflora
Cagra.1157s0001
I
Cagra.1681s0023
Capsella grandiflora
Cagra.1681s0023
I
Carubv10013748m.g
Capsella rubella
Carubv10013748m.g
I
Carubv10020487m.g
Capsella rubella
Carubv10020487m.g
I
Carubv10020555m.g
Capsella rubella
Carubv10020555m.g
I
cassava10552.m1
Manihot esculenta
cassava10552.m1
I
cassava16230.m1
Manihot esculenta
cassava16230.m1
I
cassava32886.m1
Manihot esculenta
cassava32886.m1
I
cassava9378.m1
Manihot esculenta
cassava9378.m1
I
chr1.LjB10L14.10.nc
Lotus japonicus
chr1.LjB10L14.10.nc
I
chr4.LjB15O07.110.nc
Lotus japonicus
chr4.LjB15O07.110.nc
I
Ciclev10024246m.g
Citrus clementina
Ciclev10024246m.g
I
Ciclev10033382m.g
Citrus clementina
Ciclev10033382m.g
I
Cla002355
Citrullus lanatus
Cla002355
I
Cla007227
Citrullus lanatus
Cla007227
I
Cla016709
Citrullus lanatus
Cla016709
I
Cla018797
Citrullus lanatus
Cla018797
N
Cla019282
Citrullus lanatus
Cla019282
N
Cucsa.031600
Cucumis sativus
Cucsa.031600
I
Cucsa.113660
Cucumis sativus
Cucsa.113660
N
Cucsa.198860
Cucumis sativus
Cucsa.198860
N
Cucsa.238090
Cucumis sativus
Cucsa.238090
I
Cucsa.280880
Cucumis sativus
Cucsa.280880
I
Cucsa.283930
Cucumis sativus
Cucsa.283930
I
Eucgr.B00699
Eucalyptus grandis
Eucgr.B00699
I
Eucgr.J01466
Eucalyptus grandis
Eucgr.J01466
I
Eucgr.K02654
Eucalyptus grandis
Eucgr.K02654
I
evm.TU.supercontig_13.48
Carica papaya
evm.TU.supercontig_13.48
N
evm.TU.supercontig_1401.1
Carica papaya
evm.TU.supercontig_1401.1
I
evm.TU.supercontig_179.29
Carica papaya
evm.TU.supercontig_179.29
I
F775_01923
Aegilops tauschii
F775_01923
I
TCP1
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_2001059
I
BRC2
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_2000933
I
gene03882-v1.0-hybrid
Fragaria vesca
gene03882-v1.0-hybrid
I
GLYMA04G22407
Glycine max
GLYMA04G22407
I
GLYMA05G07943
Glycine max
GLYMA05G07943
I
GLYMA06G23410
Glycine max
GLYMA06G23410
N
GLYMA13G07475
Glycine max
GLYMA13G07475
I
GLYMA17G13065
Glycine max
GLYMA17G13065
I
GLYMA19G05921
Glycine max
GLYMA19G05921
I
Gorai.001G200400
Gossypium raimondii
Gorai.001G200400
I
Gorai.007G007500
Gossypium raimondii
Gorai.007G007500
I
Gorai.008G186800
Gossypium raimondii
Gorai.008G186800
I
Gorai.008G285300
Gossypium raimondii
Gorai.008G285300
I
GRMZM2G055024
Zea mays
GRMZM2G055024
I
GRMZM2G060319
Zea mays
GRMZM2G060319
I
GRMZM2G064628
Zea mays
GRMZM2G064628
I
GRMZM2G110242
Zea mays
GRMZM2G110242
I
GRMZM2G166687
Zea mays
GRMZM2G166687
I
GSMUA_Achr2G21050_001
Musa acuminata
GSMUA_Achr2G21050_001
I
GSMUA_Achr2G22480_001
Musa acuminata
GSMUA_Achr2G22480_001
I
LPERR08G12880
Leersia perrieri
LPERR08G12880
I
LPERR09G06870
Leersia perrieri
LPERR09G06870
I
Lus10032465.g
Linum usitatissimum
Lus10032465.g
N
Lus10035055.g
Linum usitatissimum
Lus10035055.g
I
MDP0000173048
Malus domestica
MDP0000173048
I
MDP0000219838
Malus domestica
MDP0000219838
N
MDP0000224810
Malus domestica
MDP0000224810
N
MDP0000272980
Malus domestica
MDP0000272980
I
mgf022233m
Mimulus guttatus
mgf022233m
I
mgf024687m
Mimulus guttatus
mgf024687m
I
mgf026636m
Mimulus guttatus
mgf026636m
I
MLOC_4614
Hordeum vulgare
MLOC_4614
I
MLOC_58142
Hordeum vulgare
MLOC_58142
I
MTR_4g111935
Medicago truncatula
MTR_4g111935
I
OBART08G15630
Oryza barthii
OBART08G15630
N
OBART09G10040
Oryza barthii
OBART09G10040
I
OGLUM08G16380
Oryza glumaepatula
OGLUM08G16380
I
OGLUM09G10300
Oryza glumaepatula
OGLUM09G10300
I
OMERI08G12900
Oryza meridionalis
OMERI08G12900
I
OMERI09G07770
Oryza meridionalis
OMERI09G07770
I
ONIVA08G16720
Oryza nivara
ONIVA08G16720
I
ONIVA09G09540
Oryza nivara
ONIVA09G09540
I
OPUNC08G13710
Oryza punctata
OPUNC08G13710
I
OPUNC09G08520
Oryza punctata
OPUNC09G08520
I
orange1.1g035911m.g
Citrus sinensis
orange1.1g035911m.g
I
orange1.1g039323m.g
Citrus sinensis
orange1.1g039323m.g
I
ORGLA08G0137200
Oryza glaberrima
ORGLA08G0137200
I
ORUFI08G17540
Oryza rufipogon
ORUFI08G17540
I
ORUFI09G10660
Oryza rufipogon
ORUFI09G10660
I
OS08G0432300
Oryza sativa
OS08G0432300
I
OS09G0410500
Oryza sativa
OS09G0410500
I
Pavir.Ba01820
Panicum virgatum
Pavir.Ba01820
I
Pavir.Bb02154
Panicum virgatum
Pavir.Bb02154
I
Pavir.Fa00870
Panicum virgatum
Pavir.Fa00870
I
Pavir.Fb01590
Panicum virgatum
Pavir.Fb01590
I
PGSC0003DMG400000823
Solanum tuberosum
PGSC0003DMG400000823
I
PGSC0003DMG400004054
Solanum tuberosum
PGSC0003DMG400004054
N
PGSC0003DMG400005705
Solanum tuberosum
PGSC0003DMG400005705
I
PGSC0003DMG400007467
Solanum tuberosum
PGSC0003DMG400007467
I
PK12240.1
Cannabis sativa
PK12240.1
D
PK16683.1
Cannabis sativa
PK16683.1
N
PK19717.1
Cannabis sativa
PK19717.1
D
Pm015499
Prunus mume
Pm015499
I
Pm029002
Prunus mume
Pm029002
I
Pm030202
Prunus mume
Pm030202
I
POPTR_0008s11470
Populus trichocarpa
POPTR_0008s11470
I
POPTR_0010s14030
Populus trichocarpa
POPTR_0010s14030
I
POPTR_0012s05660
Populus trichocarpa
POPTR_0012s05660
I
POPTR_0017s13980
Populus trichocarpa
POPTR_0017s13980
I
PRUPE_ppa015026mg
Prunus persica
PRUPE_ppa015026mg
I
PRUPE_ppa016240mg
Prunus persica
PRUPE_ppa016240mg
I
PRUPE_ppa027156mg
Prunus persica
PRUPE_ppa027156mg
I
SapurV1A.0301s0010
Salix purpurea
SapurV1A.0301s0010
I
SapurV1A.0304s0080
Salix purpurea
SapurV1A.0304s0080
I
SapurV1A.0583s0060
Salix purpurea
SapurV1A.0583s0060
I
SapurV1A.0682s0140
Salix purpurea
SapurV1A.0682s0140
I
SapurV1A.1895s0010
Salix purpurea
SapurV1A.1895s0010
I
SapurV1A.1895s0020
Salix purpurea
SapurV1A.1895s0020
I
Sb02g024450
Sorghum bicolor
Sb02g024450
I
Sb07g021140
Sorghum bicolor
Sb07g021140
I
Si015230m.g
Setaria italica
Si015230m.g
I
Si033183m.g
Setaria italica
Si033183m.g
I
Solyc03g119770.2
Solanum lycopersicum
Solyc03g119770.2
I
Solyc04g006980.1
Solanum lycopersicum
Solyc04g006980.1
I
Solyc05g009900.1
Solanum lycopersicum
Solyc05g009900.1
I
Solyc06g069240.1
Solanum lycopersicum
Solyc06g069240.1
N
TCM_011874
Theobroma cacao
TCM_011874
I
TCM_012252
Theobroma cacao
TCM_012252
I
TCM_019518
Theobroma cacao
TCM_019518
I
Thhalv10019499m.g
Eutrema salsugineum
Thhalv10019499m.g
I
Thhalv10021948m.g
Eutrema salsugineum
Thhalv10021948m.g
N
Traes_5BL_19F383CC71
Triticum aestivum
Traes_5BL_19F383CC71
I
Traes_5DL_46A3B0DAB1
Triticum aestivum
Traes_5DL_46A3B0DAB1
I
TRIUR3_20728
Triticum urartu
TRIUR3_20728
I
BRC2
Vitis vinifera
VIT_01s0011g02920
I
TCP1
Vitis vinifera
VIT_14s0083g00150
I