spi/pu.1 (Ciona intestinalis)
Ets

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00178 (Ets) IPR000418 ENSCING00000021930 T175810_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Spic
M01480_2.00 		Mus musculus
NNNNRGAAV
BTTCYNNNN		 PBM
Wei et al.(2010)
Spic 		0.943 0.525
Spic
M03009_2.00 		Mus musculus
RAAAAGMGGAAGTW
WACTTCCKCTTTTY		 SELEX
Jolma et al.(2013)
Spic_1 		0.943 0.525
SPIC
M03005_2.00 		Homo sapiens
NRAAWSVGGAAGTM
KACTTCCBSWTTYN		 SELEX
Jolma et al.(2013)
SPIC_1 		0.943 0.512
Spi1
M00155_2.00 		Mus musculus
NNNVGGAAVH
DBTTCCBNNN		 PBM
Badis et al.(2009)
Sfpi1_1034 		0.930 0.475
Spi1
M01475_2.00 		Mus musculus
DDNVGGAASY
RSTTCCBNHH		 PBM
Wei et al.(2010)
Sfpi1 		0.930 0.475
SPI1
M02965_2.00 		Homo sapiens
RAAAAGMGGAAGTW
WACTTCCKCTTTTY		 SELEX
Jolma et al.(2013)
SPI1_1 		0.930 0.475
SPI1
M07944_2.00 		Homo sapiens
NRAAWGRGGAASTGRRANN
NNTYYCASTTCCYCWTTYN		 ChIP-seq
Gerstein et al.(2012)
GM12878_PU1_HudsonAlpha 		0.930 0.475
SPI1
M07945_2.00 		Homo sapiens
AAWGRGGAASTGARAVHNN
NNDBTYTCASTTCCYCWTT		 ChIP-seq
Gerstein et al.(2012)
GM12891_PU1_HudsonAlpha 		0.930 0.475
SPI1
M07946_2.00 		Homo sapiens
RRAAAGAGGAAGTGV
BCACTTCCTCTTTYY		 ChIP-seq
Gerstein et al.(2012)
K562_PU1_HudsonAlpha 		0.930 0.475
SPI1
M08026_2.00 		Homo sapiens
VRAAWGRGGAAGTGV
BCACTTCCYCWTTYB		 ChIP-seq
Chen et al.(2011)
SRP005406_SPI1 		0.930 0.475
Spi1
M08027_2.00 		Mus musculus
VRRAWRRGGAAGWVD
HBWCTTCCYYWTYYB		 ChIP-seq
Chen et al.(2011)
GSE11329_Sfpi1 		0.930 0.475
SPI1
M09047_2.00 		Homo sapiens
VRAAWGRGGAAGTGRNN
NNYCACTTCCYCWTTYB		 Misc
Kulakovskiy et al.(2013)
SPI1_HUMAN.H11MO.0.A 		0.930 0.475
Spi1
M09065_2.00 		Mus musculus
VRARWGRGGAAGTGV
BCACTTCCYCWYTYB		 Misc
Kulakovskiy et al.(2013)
SPI1_MOUSE.H11MO.0.A 		0.930 0.475
Spi1
M09538_2.00 		Mus musculus
WGAGGAAGTG
CACTTCCTCW		 Misc
Heinz et al.(2010)
ThioMac-PU.1_GSE21512 		0.930 0.475
SPI1
M10472_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PU1_Q4 		0.930 0.475
SPI1
M10473_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PU1_Q6 		0.930 0.475
SPI1
M10474_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SPI1_01 		0.930 0.475
SPI1
M10475_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SPI1_07 		0.930 0.475
SPI1
M10476_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SPI1_08 		0.930 0.475
SPI1
M10477_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SPI1_Q5 		0.930 0.475
SPIB
M03008_2.00 		Homo sapiens
NAAAAGMGGAAGTD
HACTTCCKCTTTTN		 SELEX
Jolma et al.(2013)
SPIB_1 		0.857 0.425
SPIB
M04803_2.00 		Homo sapiens
DWDGVGGAAGTD
HACTTCCBCHWH		 SELEX
Yin et al.(2017)
SPIB_eDBD_HT-SELEX 		0.857 0.425
SPIB
M04805_2.00 		Homo sapiens
NWWWRVGGAASTN
NASTTCCBYWWWN		 SELEX
Yin et al.(2017)
SPIB_FL_HT-SELEX 		0.857 0.425
SPIB
M02678_2.00 		Homo sapiens
WSMGGAA
TTCCKSW		 SELEX
Mathelier et al.(2014)
MA0081.1 		0.857 0.425
SPIB
M09064_2.00 		Homo sapiens
NRAAWGRGGAAGTGRRD
HYYCACTTCCYCWTTYN		 Misc
Kulakovskiy et al.(2013)
SPIB_HUMAN.H11MO.0.A 		0.857 0.425
Spib
M09068_2.00 		Mus musculus
RAAAGRGGAAGTGRVWN
NWBYCACTTCCYCTTTY		 Misc
Kulakovskiy et al.(2013)
SPIB_MOUSE.H11MO.0.A 		0.857 0.425
SPIB
M09537_2.00 		Homo sapiens
AAARVGGAASTG
CASTTCCBYTTT		 Misc
Heinz et al.(2010)
OCILY3-SPIB_GSE56857 		0.857 0.425
SPIB
M10519_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SPIB_01 		0.857 0.425
SPIB
M04804_2.00 		Homo sapiens
DAWGRGGAAGTD
HACTTCCYCWTH		 SELEX
Yin et al.(2017)
SPIB_eDBD_Methyl-HT-SELEX 		0.857 0.425
SPIB
M04806_2.00 		Homo sapiens
RWWWGRGGAAGTD
HACTTCCYCWWWY		 SELEX
Yin et al.(2017)
SPIB_FL_Methyl-HT-SELEX 		0.857 0.425
Elf5
M01490_2.00 		Mus musculus
DNVVGGAARH
DYTTCCBBNH		 PBM
Wei et al.(2010)
Elf5 		0.783 0.400
ELF5
M02988_2.00 		Homo sapiens
WNVMGGAAGTN
NACTTCCKBNW		 SELEX
Jolma et al.(2013)
ELF5_1 		0.783 0.400
ELF5
M02989_2.00 		Homo sapiens
WNVMGGAARYN
NRYTTCCKBNW		 SELEX
Jolma et al.(2013)
ELF5_2 		0.783 0.400
Elf5
M03011_2.00 		Mus musculus
WNVMGGAARYN
NRYTTCCKBNW		 SELEX
Jolma et al.(2013)
Elf5_1 		0.783 0.400
ELF5
M04756_2.00 		Homo sapiens
NDNVMGGAAGBD
HVCTTCCKBNHN		 SELEX
Yin et al.(2017)
ELF5_eDBD_HT-SELEX 		0.783 0.400
ELF5
M04758_2.00 		Homo sapiens
NAMCCGGAAGYN
NRCTTCCGGKTN		 SELEX
Yin et al.(2017)
ELF5_FL_HT-SELEX 		0.783 0.400
ELF5
M09054_2.00 		Homo sapiens
VVVANVMGGAAGHDV
BHDCTTCCKBNTBBB		 Misc
Kulakovskiy et al.(2013)
ELF5_HUMAN.H11MO.0.A 		0.783 0.400
Elf5
M09076_2.00 		Mus musculus
RGRAVRAGGAAGDRRNN
NNYYHCTTCCTYBTYCY		 Misc
Kulakovskiy et al.(2013)
ELF5_MOUSE.H11MO.0.A 		0.783 0.400
ELF5
M09534_2.00 		Homo sapiens
ABVMGGAAGT
ACTTCCKBVT		 Misc
Heinz et al.(2010)
T47D-ELF5_GSE30407 		0.783 0.400
ELF5
M10501_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ELF5_01 		0.783 0.400
ELF5
M04757_2.00 		Homo sapiens
NABVAGGAAGTD
HACTTCCTBVTN		 SELEX
Yin et al.(2017)
ELF5_eDBD_Methyl-HT-SELEX 		0.783 0.400
ELF5
M04759_2.00 		Homo sapiens
DABVAGGAAGTD
HACTTCCTBVTH		 SELEX
Yin et al.(2017)
ELF5_FL_Methyl-HT-SELEX 		0.783 0.400
Etv6
M01491_2.00 		Mus musculus
NNNVGGAARH
DYTTCCBNNN		 PBM
Wei et al.(2010)
Etv6 		0.721 0.375
Etv6
M09077_2.00 		Mus musculus
NSAGGAARB
VYTTCCTSN		 Misc
Kulakovskiy et al.(2013)
ETV6_MOUSE.H11MO.0.C 		0.721 0.375
For this family, TFs with SR scores > 0.717 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCINP00000034439 Ets 201 285

Links

Other Ets family TFs
Other Ciona intestinalis TFs

339 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_007_00647 Aquilegia coerulea Aquca_007_00647 I
Aquca_027_00068 Aquilegia coerulea Aquca_027_00068 I
Al_scaffold_0003_569 Arabidopsis lyrata Al_scaffold_0003_569 I
AGL80 Arabidopsis thaliana AT5G48670 D
Bostr.2392s0039 Boechera stricta Bostr.2392s0039 I
Bostr.2570s0082 Boechera stricta Bostr.2570s0082 I
Bo2g104810 Brassica oleracea Bo2g104810 I
Bo9g078450 Brassica oleracea Bo9g078450 I
Bra018490 Brassica rapa Bra018490 I
Bra029469 Brassica rapa Bra029469 I
Cagra.1772s0003 Capsella grandiflora Cagra.1772s0003 I
Carubv10014232m.g Capsella rubella Carubv10014232m.g I
evm.TU.contig_24608 Carica papaya evm.TU.contig_24608 I
evm.TU.contig_24864.1 Carica papaya evm.TU.contig_24864.1 N
evm.TU.contig_25049.1 Carica papaya evm.TU.contig_25049.1 I
evm.TU.contig_25049.2 Carica papaya evm.TU.contig_25049.2 N
evm.TU.contig_25049.5 Carica papaya evm.TU.contig_25049.5 I
evm.TU.contig_25253.1 Carica papaya evm.TU.contig_25253.1 N
evm.TU.contig_25253.2 Carica papaya evm.TU.contig_25253.2 N
evm.TU.contig_25982.2 Carica papaya evm.TU.contig_25982.2 I
evm.TU.contig_26058.1 Carica papaya evm.TU.contig_26058.1 I
evm.TU.contig_26058.2 Carica papaya evm.TU.contig_26058.2 I
evm.TU.contig_28089 Carica papaya evm.TU.contig_28089 I
evm.TU.contig_28448.1 Carica papaya evm.TU.contig_28448.1 N
evm.TU.contig_28448.4 Carica papaya evm.TU.contig_28448.4 I
evm.TU.contig_31147 Carica papaya evm.TU.contig_31147 I
evm.TU.contig_33457.2 Carica papaya evm.TU.contig_33457.2 I
evm.TU.contig_35009 Carica papaya evm.TU.contig_35009 I
evm.TU.contig_35762 Carica papaya evm.TU.contig_35762 N
evm.TU.contig_35868 Carica papaya evm.TU.contig_35868 N
evm.TU.contig_36181 Carica papaya evm.TU.contig_36181 I
evm.TU.contig_36543 Carica papaya evm.TU.contig_36543 I
evm.TU.contig_38760 Carica papaya evm.TU.contig_38760 N
evm.TU.contig_40164 Carica papaya evm.TU.contig_40164 N
evm.TU.contig_40499.2 Carica papaya evm.TU.contig_40499.2 I
evm.TU.contig_44957 Carica papaya evm.TU.contig_44957 I
evm.TU.supercontig_117.18 Carica papaya evm.TU.supercontig_117.18 I
evm.TU.supercontig_117.19 Carica papaya evm.TU.supercontig_117.19 I
evm.TU.supercontig_118.30 Carica papaya evm.TU.supercontig_118.30 I
evm.TU.supercontig_1237.1 Carica papaya evm.TU.supercontig_1237.1 I
evm.TU.supercontig_1256.1 Carica papaya evm.TU.supercontig_1256.1 N
evm.TU.supercontig_135.5 Carica papaya evm.TU.supercontig_135.5 N
evm.TU.supercontig_139.40 Carica papaya evm.TU.supercontig_139.40 I
evm.TU.supercontig_1750.2 Carica papaya evm.TU.supercontig_1750.2 I
evm.TU.supercontig_185.11 Carica papaya evm.TU.supercontig_185.11 I
evm.TU.supercontig_185.12 Carica papaya evm.TU.supercontig_185.12 I
evm.TU.supercontig_185.2 Carica papaya evm.TU.supercontig_185.2 I
evm.TU.supercontig_185.7 Carica papaya evm.TU.supercontig_185.7 I
evm.TU.supercontig_185.8 Carica papaya evm.TU.supercontig_185.8 N
evm.TU.supercontig_185.9 Carica papaya evm.TU.supercontig_185.9 I
evm.TU.supercontig_265.1 Carica papaya evm.TU.supercontig_265.1 I
evm.TU.supercontig_265.3 Carica papaya evm.TU.supercontig_265.3 N
evm.TU.supercontig_265.6 Carica papaya evm.TU.supercontig_265.6 N
evm.TU.supercontig_30.164 Carica papaya evm.TU.supercontig_30.164 N
evm.TU.supercontig_30.166 Carica papaya evm.TU.supercontig_30.166 I
evm.TU.supercontig_34.40 Carica papaya evm.TU.supercontig_34.40 N
evm.TU.supercontig_34.41 Carica papaya evm.TU.supercontig_34.41 N
evm.TU.supercontig_358.1 Carica papaya evm.TU.supercontig_358.1 N
Ca_06495 Cicer arietinum Ca_06495 I
Ca_13275 Cicer arietinum Ca_13275 I
Cla005226 Citrullus lanatus Cla005226 I
Cla009163 Citrullus lanatus Cla009163 I
Ciclev10006519m.g Citrus clementina Ciclev10006519m.g I
Ciclev10013728m.g Citrus clementina Ciclev10013728m.g I
Ciclev10013876m.g Citrus clementina Ciclev10013876m.g N
Ciclev10024463m.g Citrus clementina Ciclev10024463m.g I
orange1.1g038848m.g Citrus sinensis orange1.1g038848m.g N
orange1.1g040642m.g Citrus sinensis orange1.1g040642m.g I
Cucsa.050930 Cucumis sativus Cucsa.050930 I
Eucgr.E01733 Eucalyptus grandis Eucgr.E01733 I
Eucgr.E01734 Eucalyptus grandis Eucgr.E01734 I
Eucgr.E01736 Eucalyptus grandis Eucgr.E01736 I
Eucgr.E01737 Eucalyptus grandis Eucgr.E01737 I
Thhalv10012000m.g Eutrema salsugineum Thhalv10012000m.g I
Thhalv10022373m.g Eutrema salsugineum Thhalv10022373m.g I
Thhalv10023873m.g Eutrema salsugineum Thhalv10023873m.g I
Thhalv10024119m.g Eutrema salsugineum Thhalv10024119m.g I
Thhalv10024162m.g Eutrema salsugineum Thhalv10024162m.g I
gene15899-v1.0-hybrid Fragaria vesca gene15899-v1.0-hybrid N
gene18029-v1.0-hybrid Fragaria vesca gene18029-v1.0-hybrid I
gene22916-v1.0-hybrid Fragaria vesca gene22916-v1.0-hybrid I
gene22967-v1.0-hybrid Fragaria vesca gene22967-v1.0-hybrid I
gene23924-v1.0-hybrid Fragaria vesca gene23924-v1.0-hybrid I
GLYMA03G19880 Glycine max GLYMA03G19880 N
GLYMA11G33460 Glycine max GLYMA11G33460 I
GLYMA18G04760 Glycine max GLYMA18G04760 I
Gorai.004G229700 Gossypium raimondii Gorai.004G229700 N
Gorai.004G292000 Gossypium raimondii Gorai.004G292000 I
Gorai.013G210700 Gossypium raimondii Gorai.013G210700 N
Lus10014578.g Linum usitatissimum Lus10014578.g I
Lus10014883.g Linum usitatissimum Lus10014883.g I
Lus10022316.g Linum usitatissimum Lus10022316.g I
Lus10032108.g Linum usitatissimum Lus10032108.g I
chr6.LjT19B22.120.nd Lotus japonicus chr6.LjT19B22.120.nd I
LjSGA_018236.1 Lotus japonicus LjSGA_018236.1 I
LjSGA_042497.2 Lotus japonicus LjSGA_042497.2 I
LjSGA_107301.1 Lotus japonicus LjSGA_107301.1 I
LjSGA_126766.1 Lotus japonicus LjSGA_126766.1 I
LjT40B16.70.nc Lotus japonicus LjT40B16.70.nc I
MDP0000133671 Malus domestica MDP0000133671 N
MDP0000236438 Malus domestica MDP0000236438 N
MDP0000299637 Malus domestica MDP0000299637 N
MDP0000846004 Malus domestica MDP0000846004 I
MDP0000925348 Malus domestica MDP0000925348 I
cassava15247.m1 Manihot esculenta cassava15247.m1 I
cassava19828.m1 Manihot esculenta cassava19828.m1 I
MTR_3g065100 Medicago truncatula MTR_3g065100 I
mgf026186m Mimulus guttatus mgf026186m I
GSMUA_Achr2G18400_001 Musa acuminata GSMUA_Achr2G18400_001 N
GSMUA_Achr3G05500_001 Musa acuminata GSMUA_Achr3G05500_001 I
GSMUA_Achr3G08500_001 Musa acuminata GSMUA_Achr3G08500_001 N
PDK_20s1688321g001 Phoenix dactylifera PDK_20s1688321g001 N
POPTR_0005s00420 Populus trichocarpa POPTR_0005s00420 I
POPTR_0013s00350 Populus trichocarpa POPTR_0013s00350 I
POPTR_0013s01880 Populus trichocarpa POPTR_0013s01880 I
Pm003257 Prunus mume Pm003257 I
Pm003258 Prunus mume Pm003258 N
PRUPE_ppa018168mg Prunus persica PRUPE_ppa018168mg I
PRUPE_ppa019749mg Prunus persica PRUPE_ppa019749mg I
PRUPE_ppa022799mg Prunus persica PRUPE_ppa022799mg N
30128.m008984 Ricinus communis 30128.m008984 I
30199.m000879 Ricinus communis 30199.m000879 I
SapurV1A.0066s0310 Salix purpurea SapurV1A.0066s0310 I
SapurV1A.0442s0180 Salix purpurea SapurV1A.0442s0180 I
SapurV1A.0442s0190 Salix purpurea SapurV1A.0442s0190 I
Solyc01g102260.2 Solanum lycopersicum Solyc01g102260.2 I
TCM_025670 Theobroma cacao TCM_025670 I
TCM_025671 Theobroma cacao TCM_025671 I
TCM_025676 Theobroma cacao TCM_025676 N
TCM_026842 Theobroma cacao TCM_026842 I
TCM_026845 Theobroma cacao TCM_026845 I
TCM_042799 Theobroma cacao TCM_042799 I
TCM_042848 Theobroma cacao TCM_042848 N
VIT_14s0060g00300 Vitis vinifera VIT_14s0060g00300 I