SELMODRAFT_48639 (Selaginella moellendorffii)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 SELMODRAFT_48639 T249805_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT-GTL1
M06968_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_col_a 		0.851 0.672
AT-GTL1
M06969_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_colamp_a 		0.851 0.672
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFJ05387 MADF 17 88
EFJ05387 MADF 140 210

Links

Other MADF family TFs
Other Selaginella moellendorffii TFs

178 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_24861 Aegilops tauschii F775_24861 N 0.827
F775_26337 Aegilops tauschii F775_26337 I 0.919
AMTR_s00030p00088210 Amborella trichopoda AMTR_s00030p00088210 I 0.902
AMTR_s00041p00147950 Amborella trichopoda AMTR_s00041p00147950 I 0.912
Aquca_037_00343 Aquilegia coerulea Aquca_037_00343 I 0.911
AT-GTL1 Arabidopsis lyrata fgenesh2_kg.1__3451__AT1G33240.1 I 0.851
scaffold_202643.1 Arabidopsis lyrata scaffold_202643.1 I 0.818
AT-GTL1 Arabidopsis thaliana AT1G33240 D 0.851
Bostr.20129s0126 Boechera stricta Bostr.20129s0126 I 0.818
Bostr.3359s0047 Boechera stricta Bostr.3359s0047 I 0.844
BRADI1G77610 Brachypodium distachyon BRADI1G77610 I 0.857
BRADI3G30457 Brachypodium distachyon BRADI3G30457 I 0.908
BRADI5G17150 Brachypodium distachyon BRADI5G17150 I 0.901
Bo2g091240 Brassica oleracea Bo2g091240 I 0.827
Bo6g049430 Brassica oleracea Bo6g049430 I 0.849
Bo6g083690 Brassica oleracea Bo6g083690 I 0.818
Bo6g120870 Brassica oleracea Bo6g120870 I 0.818
Bo8g027460 Brassica oleracea Bo8g027460 I 0.836
Bra003702 Brassica rapa Bra003702 I 0.825
Bra003703 Brassica rapa Bra003703 I 0.819
Bra015716 Brassica rapa Bra015716 I 0.818
Bra036731 Brassica rapa Bra036731 I 0.829
Bra040010 Brassica rapa Bra040010 I 0.849
PK24122.1 Cannabis sativa PK24122.1 I 0.816
PK26613.1 Cannabis sativa PK26613.1 I 0.842
Cagra.20992s0001 Capsella grandiflora Cagra.20992s0001 I 0.847
Cagra.20992s0002 Capsella grandiflora Cagra.20992s0002 I 0.818
Cagra.6133s0035 Capsella grandiflora Cagra.6133s0035 I 0.856
Carubv10008638m.g Capsella rubella Carubv10008638m.g I 0.856
Carubv10019974m.g Capsella rubella Carubv10019974m.g I 0.847
Carubv10020016m.g Capsella rubella Carubv10020016m.g I 0.818
evm.TU.supercontig_21.194 Carica papaya evm.TU.supercontig_21.194 I 0.841
evm.TU.supercontig_2611.1 Carica papaya evm.TU.supercontig_2611.1 I 0.835
evm.TU.supercontig_37.120 Carica papaya evm.TU.supercontig_37.120 I 0.899
Ca_04385 Cicer arietinum Ca_04385 I 0.815
Ca_04386 Cicer arietinum Ca_04386 I 0.829
Ca_25135 Cicer arietinum Ca_25135 I 0.836
Cla005046 Citrullus lanatus Cla005046 I 0.890
Cla007910 Citrullus lanatus Cla007910 I 0.849
Ciclev10000593m.g Citrus clementina Ciclev10000593m.g I 0.833
Ciclev10000627m.g Citrus clementina Ciclev10000627m.g I 0.816
Ciclev10018915m.g Citrus clementina Ciclev10018915m.g I 0.889
Ciclev10025533m.g Citrus clementina Ciclev10025533m.g I 0.828
orange1.1g003766m.g Citrus sinensis orange1.1g003766m.g I 0.889
orange1.1g006925m.g Citrus sinensis orange1.1g006925m.g I 0.833
orange1.1g007316m.g Citrus sinensis orange1.1g007316m.g I 0.816
orange1.1g012030m.g Citrus sinensis orange1.1g012030m.g I 0.828
Cucsa.193210 Cucumis sativus Cucsa.193210 I 0.894
Cucsa.250070 Cucumis sativus Cucsa.250070 I 0.841
Thhalv10007000m.g Eutrema salsugineum Thhalv10007000m.g I 0.849
Thhalv10018297m.g Eutrema salsugineum Thhalv10018297m.g I 0.818
gene01828-v1.0-hybrid Fragaria vesca gene01828-v1.0-hybrid I 0.892
gene08173-v1.0-hybrid Fragaria vesca gene08173-v1.0-hybrid I 0.854
gene08175-v1.0-hybrid Fragaria vesca gene08175-v1.0-hybrid I 0.829
GLYMA02G09060 Glycine max GLYMA02G09060 I 0.837
GLYMA10G36950 Glycine max GLYMA10G36950 I 0.829
GLYMA10G36960 Glycine max GLYMA10G36960 I 0.822
GLYMA16G28250 Glycine max GLYMA16G28250 I 0.829
GLYMA20G30640 Glycine max GLYMA20G30640 I 0.822
Gorai.002G231500 Gossypium raimondii Gorai.002G231500 I 0.836
Gorai.003G072300 Gossypium raimondii Gorai.003G072300 I 0.893
Gorai.008G099700 Gossypium raimondii Gorai.008G099700 I 0.825
Gorai.008G262400 Gossypium raimondii Gorai.008G262400 I 0.863
Gorai.009G253900 Gossypium raimondii Gorai.009G253900 I 0.827
MLOC_22988 Hordeum vulgare MLOC_22988 I 0.916
MLOC_70549 Hordeum vulgare MLOC_70549 I 0.878
MLOC_74813 Hordeum vulgare MLOC_74813 I 0.896
LPERR02G21190 Leersia perrieri LPERR02G21190 I 0.866
LPERR03G01010 Leersia perrieri LPERR03G01010 I 0.887
LPERR04G16420 Leersia perrieri LPERR04G16420 I 0.900
LPERR10G12070 Leersia perrieri LPERR10G12070 I 0.904
Lus10018888.g Linum usitatissimum Lus10018888.g I 0.859
MDP0000156139 Malus domestica MDP0000156139 I 0.818
MDP0000451038 Malus domestica MDP0000451038 I 0.892
MDP0000701272 Malus domestica MDP0000701272 I 0.897
cassava16715.m1 Manihot esculenta cassava16715.m1 I 0.856
cassava16854.m1 Manihot esculenta cassava16854.m1 I 0.836
cassava21480.m1 Manihot esculenta cassava21480.m1 I 0.858
cassava22361.valid.m1 Manihot esculenta cassava22361.valid.m1 I 0.888
cassava22362.valid.m1 Manihot esculenta cassava22362.valid.m1 I 0.888
cassava22363.valid.m1 Manihot esculenta cassava22363.valid.m1 I 0.888
cassava2484.valid.m1 Manihot esculenta cassava2484.valid.m1 I 0.824
MTR_1g098870 Medicago truncatula MTR_1g098870 I 0.813
MTR_1g098900 Medicago truncatula MTR_1g098900 I 0.815
MTR_6g035370 Medicago truncatula MTR_6g035370 I 0.825
mgf004276m Mimulus guttatus mgf004276m I 0.867
mgf018892m Mimulus guttatus mgf018892m N 0.861
mgf021983m Mimulus guttatus mgf021983m I 0.866
GSMUA_Achr11G03520_001 Musa acuminata GSMUA_Achr11G03520_001 I 0.868
GSMUA_Achr2G11910_001 Musa acuminata GSMUA_Achr2G11910_001 I 0.818
GSMUA_Achr5G19950_001 Musa acuminata GSMUA_Achr5G19950_001 I 0.894
GSMUA_Achr9G18800_001 Musa acuminata GSMUA_Achr9G18800_001 I 0.850
OBART02G25970 Oryza barthii OBART02G25970 I 0.899
OBART04G20290 Oryza barthii OBART04G20290 I 0.914
OB02G33250 Oryza brachyantha OB02G33250 I 0.903
OB04G27270 Oryza brachyantha OB04G27270 I 0.914
ORGLA02G0222200 Oryza glaberrima ORGLA02G0222200 I 0.899
ORGLA03G0008300 Oryza glaberrima ORGLA03G0008300 I 0.893
OGLUM02G26410 Oryza glumaepatula OGLUM02G26410 I 0.899
OGLUM03G01010 Oryza glumaepatula OGLUM03G01010 I 0.893
OGLUM04G20210 Oryza glumaepatula OGLUM04G20210 I 0.914
OGLUM10G15720 Oryza glumaepatula OGLUM10G15720 I 0.904
BGIOSGA005934 Oryza indica BGIOSGA005934 I 0.899
BGIOSGA014631 Oryza indica BGIOSGA014631 I 0.914
BGIOSGA031553 Oryza indica BGIOSGA031553 I 0.904
OLONG_017894 Oryza longistaminata OLONG_017894 I 0.914
OMERI03G00890 Oryza meridionalis OMERI03G00890 I 0.893
OMERI10G12340 Oryza meridionalis OMERI10G12340 I 0.904
ONIVA03G01170 Oryza nivara ONIVA03G01170 I 0.901
ONIVA04G18520 Oryza nivara ONIVA04G18520 I 0.914
ONIVA05G15440 Oryza nivara ONIVA05G15440 I 0.899
ONIVA10G17310 Oryza nivara ONIVA10G17310 I 0.904
OPUNC02G23730 Oryza punctata OPUNC02G23730 I 0.899
OPUNC04G17930 Oryza punctata OPUNC04G17930 I 0.914
OPUNC10G14260 Oryza punctata OPUNC10G14260 I 0.894
ORUFI02G27390 Oryza rufipogon ORUFI02G27390 I 0.899
ORUFI03G00820 Oryza rufipogon ORUFI03G00820 I 0.901
ORUFI04G21880 Oryza rufipogon ORUFI04G21880 I 0.914
ORUFI10G16810 Oryza rufipogon ORUFI10G16810 I 0.904
Pavir.Ab02437 Panicum virgatum Pavir.Ab02437 I 0.879
Pavir.Gb01188 Panicum virgatum Pavir.Gb01188 I 0.906
Pavir.Ia04768 Panicum virgatum Pavir.Ia04768 I 0.868
Pavir.Ib00103 Panicum virgatum Pavir.Ib00103 I 0.877
e_gw1.85.39.1 Physcomitrella patens e_gw1.85.39.1 I 0.915
gw1.19.47.1 Physcomitrella patens gw1.19.47.1 I 0.908
POPTR_0001s31660 Populus trichocarpa POPTR_0001s31660 I 0.849
POPTR_0001s45870 Populus trichocarpa POPTR_0001s45870 I 0.906
POPTR_0002s06900 Populus trichocarpa POPTR_0002s06900 I 0.860
POPTR_0002s06920 Populus trichocarpa POPTR_0002s06920 I 0.845
POPTR_0005s21410 Populus trichocarpa POPTR_0005s21410 I 0.844
POPTR_0005s21420 Populus trichocarpa POPTR_0005s21420 I 0.868
POPTR_0011s15050 Populus trichocarpa POPTR_0011s15050 I 0.902
POPTR_0019s02650 Populus trichocarpa POPTR_0019s02650 I 0.875
Pm022570 Prunus mume Pm022570 I 0.834
Pm022572 Prunus mume Pm022572 I 0.826
Pm024289 Prunus mume Pm024289 I 0.906
PRUPE_ppa001704mg Prunus persica PRUPE_ppa001704mg I 0.906
PRUPE_ppa002848mg Prunus persica PRUPE_ppa002848mg I 0.826
PRUPE_ppa021097mg Prunus persica PRUPE_ppa021097mg I 0.821
29576.m000223 Ricinus communis 29576.m000223 I 0.879
30068.m002635 Ricinus communis 30068.m002635 I 0.902
30206.m000769 Ricinus communis 30206.m000769 I 0.836
SapurV1A.0047s0660 Salix purpurea SapurV1A.0047s0660 I 0.904
SapurV1A.0066s0010 Salix purpurea SapurV1A.0066s0010 I 0.849
SapurV1A.0231s0350 Salix purpurea SapurV1A.0231s0350 I 0.848
SapurV1A.0285s0240 Salix purpurea SapurV1A.0285s0240 I 0.906
SapurV1A.0625s0070 Salix purpurea SapurV1A.0625s0070 I 0.841
SapurV1A.0625s0080 Salix purpurea SapurV1A.0625s0080 I 0.861
SapurV1A.0655s0060 Salix purpurea SapurV1A.0655s0060 I 0.863
SapurV1A.5612s0010 Salix purpurea SapurV1A.5612s0010 I 0.841
SELMODRAFT_120369 Selaginella moellendorffii SELMODRAFT_120369 I 0.927
SELMODRAFT_66294 Selaginella moellendorffii SELMODRAFT_66294 I 0.971
SELMODRAFT_85122 Selaginella moellendorffii SELMODRAFT_85122 I 0.927
Si012121m.g Setaria italica Si012121m.g I 0.906
Si016578m.g Setaria italica Si016578m.g I 0.872
Si034382m.g Setaria italica Si034382m.g I 0.877
Solyc04g071360.2 Solanum lycopersicum Solyc04g071360.2 I 0.859
Solyc12g056510.1 Solanum lycopersicum Solyc12g056510.1 I 0.844
PGSC0003DMG400024107 Solanum tuberosum PGSC0003DMG400024107 I 0.859
Sb01g017120 Sorghum bicolor Sb01g017120 I 0.885
Sb04g033390 Sorghum bicolor Sb04g033390 I 0.880
Sb06g023980 Sorghum bicolor Sb06g023980 I 0.897
TCM_001348 Theobroma cacao TCM_001348 I 0.845
TCM_015563 Theobroma cacao TCM_015563 I 0.894
TCM_035565 Theobroma cacao TCM_035565 I 0.837
TCM_035571 Theobroma cacao TCM_035571 I 0.863
Traes_1BL_A5A91DE10 Triticum aestivum Traes_1BL_A5A91DE10 I 0.898
Traes_2AL_9E68ABA72 Triticum aestivum Traes_2AL_9E68ABA72 I 0.919
Traes_2BL_0B80B3876 Triticum aestivum Traes_2BL_0B80B3876 I 0.919
TRIUR3_33328 Triticum urartu TRIUR3_33328 I 0.898
TRIUR3_33826 Triticum urartu TRIUR3_33826 I 0.861
AT-GTL1 Vitis vinifera VIT_02s0025g03220 I 0.903
VIT_04s0044g00510 Vitis vinifera VIT_04s0044g00510 I 0.857
VIT_18s0072g00670 Vitis vinifera VIT_18s0072g00670 I 0.832
GRMZM2G016649 Zea mays GRMZM2G016649 I 0.897
GRMZM2G063203 Zea mays GRMZM2G063203 I 0.885
GRMZM2G169580 Zea mays GRMZM2G169580 I 0.879
GRMZM2G414159 Zea mays GRMZM2G414159 I 0.879