CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nhr-131
(
Caenorhabditis elegans
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
WBGene00003721
T306243_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
T01G6.2
Nuclear receptor
8
74
PPCIICGQNGQGHHFGVISCRACAAFFRRAADSKWSRMKCLSKYCDGKTYHCKPCRLKKCRDVGMDV
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis elegans
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30128.m008984
Ricinus communis
30128.m008984
I
0.000
30199.m000879
Ricinus communis
30199.m000879
I
0.000
Al_scaffold_0003_569
Arabidopsis lyrata
Al_scaffold_0003_569
I
0.000
Aquca_007_00647
Aquilegia coerulea
Aquca_007_00647
I
0.000
Aquca_027_00068
Aquilegia coerulea
Aquca_027_00068
I
0.000
AT3G05860
Arabidopsis thaliana
AT3G05860
I
0.000
AGL80
Arabidopsis thaliana
AT5G48670
D
0.000
Bo2g104810
Brassica oleracea
Bo2g104810
I
0.000
Bo5g145000
Brassica oleracea
Bo5g145000
I
0.000
Bo9g078450
Brassica oleracea
Bo9g078450
I
0.000
Bostr.2392s0039
Boechera stricta
Bostr.2392s0039
I
0.000
Bostr.2570s0082
Boechera stricta
Bostr.2570s0082
I
0.000
Bostr.2570s0083
Boechera stricta
Bostr.2570s0083
I
0.000
Bra018490
Brassica rapa
Bra018490
I
0.000
Bra029469
Brassica rapa
Bra029469
I
0.000
Bra041022
Brassica rapa
Bra041022
I
0.000
Cagra.1772s0003
Capsella grandiflora
Cagra.1772s0003
I
0.000
Carubv10014232m.g
Capsella rubella
Carubv10014232m.g
I
0.000
cassava15247.m1
Manihot esculenta
cassava15247.m1
I
0.000
cassava19828.m1
Manihot esculenta
cassava19828.m1
I
0.000
cassava38612.m1
Manihot esculenta
cassava38612.m1
N
0.000
Ca_06495
Cicer arietinum
Ca_06495
I
0.000
Ca_08369
Cicer arietinum
Ca_08369
N
0.000
Ca_08934
Cicer arietinum
Ca_08934
I
0.000
Ca_13275
Cicer arietinum
Ca_13275
I
0.000
chr6.LjT19B22.120.nd
Lotus japonicus
chr6.LjT19B22.120.nd
I
0.000
Ciclev10006519m.g
Citrus clementina
Ciclev10006519m.g
I
0.000
Ciclev10013728m.g
Citrus clementina
Ciclev10013728m.g
I
0.000
Ciclev10024463m.g
Citrus clementina
Ciclev10024463m.g
I
0.000
Cla005226
Citrullus lanatus
Cla005226
I
0.000
Cla009163
Citrullus lanatus
Cla009163
I
0.000
Cucsa.050930
Cucumis sativus
Cucsa.050930
I
0.000
Cucsa.224270
Cucumis sativus
Cucsa.224270
I
0.000
Eucgr.B01824
Eucalyptus grandis
Eucgr.B01824
I
0.000
Eucgr.E01733
Eucalyptus grandis
Eucgr.E01733
I
0.000
Eucgr.E01734
Eucalyptus grandis
Eucgr.E01734
I
0.000
Eucgr.E01736
Eucalyptus grandis
Eucgr.E01736
I
0.000
Eucgr.E01737
Eucalyptus grandis
Eucgr.E01737
I
0.000
evm.TU.contig_24608
Carica papaya
evm.TU.contig_24608
I
0.000
evm.TU.contig_24864.1
Carica papaya
evm.TU.contig_24864.1
N
0.000
evm.TU.contig_25049.1
Carica papaya
evm.TU.contig_25049.1
I
0.000
evm.TU.contig_25049.2
Carica papaya
evm.TU.contig_25049.2
N
0.000
evm.TU.contig_25049.5
Carica papaya
evm.TU.contig_25049.5
I
0.000
evm.TU.contig_25253.1
Carica papaya
evm.TU.contig_25253.1
N
0.000
evm.TU.contig_25253.2
Carica papaya
evm.TU.contig_25253.2
N
0.000
evm.TU.contig_25982.2
Carica papaya
evm.TU.contig_25982.2
I
0.000
evm.TU.contig_26058.1
Carica papaya
evm.TU.contig_26058.1
I
0.000
evm.TU.contig_26058.2
Carica papaya
evm.TU.contig_26058.2
I
0.000
evm.TU.contig_27586
Carica papaya
evm.TU.contig_27586
I
0.000
evm.TU.contig_28089
Carica papaya
evm.TU.contig_28089
I
0.000
evm.TU.contig_28448.1
Carica papaya
evm.TU.contig_28448.1
N
0.000
evm.TU.contig_28448.4
Carica papaya
evm.TU.contig_28448.4
I
0.000
evm.TU.contig_31147
Carica papaya
evm.TU.contig_31147
I
0.000
evm.TU.contig_33457.2
Carica papaya
evm.TU.contig_33457.2
I
0.000
evm.TU.contig_35009
Carica papaya
evm.TU.contig_35009
I
0.000
evm.TU.contig_35265
Carica papaya
evm.TU.contig_35265
I
0.000
evm.TU.contig_35762
Carica papaya
evm.TU.contig_35762
N
0.000
evm.TU.contig_36181
Carica papaya
evm.TU.contig_36181
I
0.000
evm.TU.contig_37084
Carica papaya
evm.TU.contig_37084
I
0.000
evm.TU.contig_38146
Carica papaya
evm.TU.contig_38146
I
0.000
evm.TU.contig_38760
Carica papaya
evm.TU.contig_38760
N
0.000
evm.TU.contig_40485
Carica papaya
evm.TU.contig_40485
I
0.000
evm.TU.contig_40499.2
Carica papaya
evm.TU.contig_40499.2
I
0.000
evm.TU.contig_43368
Carica papaya
evm.TU.contig_43368
I
0.000
evm.TU.contig_44957
Carica papaya
evm.TU.contig_44957
I
0.000
evm.TU.supercontig_100.22
Carica papaya
evm.TU.supercontig_100.22
N
0.000
evm.TU.supercontig_117.18
Carica papaya
evm.TU.supercontig_117.18
I
0.000
evm.TU.supercontig_117.19
Carica papaya
evm.TU.supercontig_117.19
I
0.000
evm.TU.supercontig_118.30
Carica papaya
evm.TU.supercontig_118.30
I
0.000
evm.TU.supercontig_1237.1
Carica papaya
evm.TU.supercontig_1237.1
I
0.000
evm.TU.supercontig_139.40
Carica papaya
evm.TU.supercontig_139.40
I
0.000
evm.TU.supercontig_1750.1
Carica papaya
evm.TU.supercontig_1750.1
I
0.000
evm.TU.supercontig_1750.2
Carica papaya
evm.TU.supercontig_1750.2
I
0.000
evm.TU.supercontig_185.11
Carica papaya
evm.TU.supercontig_185.11
I
0.000
evm.TU.supercontig_185.12
Carica papaya
evm.TU.supercontig_185.12
I
0.000
evm.TU.supercontig_185.2
Carica papaya
evm.TU.supercontig_185.2
I
0.000
evm.TU.supercontig_185.7
Carica papaya
evm.TU.supercontig_185.7
I
0.000
evm.TU.supercontig_185.8
Carica papaya
evm.TU.supercontig_185.8
N
0.000
evm.TU.supercontig_185.9
Carica papaya
evm.TU.supercontig_185.9
I
0.000
evm.TU.supercontig_22.66
Carica papaya
evm.TU.supercontig_22.66
N
0.000
evm.TU.supercontig_265.1
Carica papaya
evm.TU.supercontig_265.1
I
0.000
evm.TU.supercontig_265.6
Carica papaya
evm.TU.supercontig_265.6
N
0.000
evm.TU.supercontig_30.164
Carica papaya
evm.TU.supercontig_30.164
N
0.000
evm.TU.supercontig_30.166
Carica papaya
evm.TU.supercontig_30.166
I
0.000
evm.TU.supercontig_34.40
Carica papaya
evm.TU.supercontig_34.40
N
0.000
evm.TU.supercontig_358.1
Carica papaya
evm.TU.supercontig_358.1
N
0.000
gene04949-v1.0-hybrid
Fragaria vesca
gene04949-v1.0-hybrid
I
0.000
gene18029-v1.0-hybrid
Fragaria vesca
gene18029-v1.0-hybrid
I
0.000
gene22916-v1.0-hybrid
Fragaria vesca
gene22916-v1.0-hybrid
I
0.000
gene22967-v1.0-hybrid
Fragaria vesca
gene22967-v1.0-hybrid
I
0.000
gene23924-v1.0-hybrid
Fragaria vesca
gene23924-v1.0-hybrid
I
0.000
GLYMA03G19880
Glycine max
GLYMA03G19880
N
0.000
GLYMA11G26260
Glycine max
GLYMA11G26260
N
0.000
GLYMA11G30640
Glycine max
GLYMA11G30640
N
0.000
GLYMA11G33460
Glycine max
GLYMA11G33460
I
0.000
GLYMA18G04760
Glycine max
GLYMA18G04760
I
0.000
GLYMA18G05916
Glycine max
GLYMA18G05916
N
0.000
GLYMA18G06040
Glycine max
GLYMA18G06040
N
0.000
Gorai.004G292000
Gossypium raimondii
Gorai.004G292000
I
0.000
Gorai.013G168300
Gossypium raimondii
Gorai.013G168300
I
0.000
Gorai.013G210200
Gossypium raimondii
Gorai.013G210200
I
0.000
Gorai.013G210300
Gossypium raimondii
Gorai.013G210300
N
0.000
Gorai.013G210400
Gossypium raimondii
Gorai.013G210400
I
0.000
Gorai.013G210700
Gossypium raimondii
Gorai.013G210700
N
0.000
GSMUA_Achr3G05500_001
Musa acuminata
GSMUA_Achr3G05500_001
I
0.000
LjSGA_018236.1
Lotus japonicus
LjSGA_018236.1
I
0.000
LjSGA_042497.2
Lotus japonicus
LjSGA_042497.2
I
0.000
LjSGA_057783.1
Lotus japonicus
LjSGA_057783.1
I
0.000
LjSGA_104570.1
Lotus japonicus
LjSGA_104570.1
I
0.000
LjSGA_107301.1
Lotus japonicus
LjSGA_107301.1
I
0.000
LjSGA_126766.1
Lotus japonicus
LjSGA_126766.1
I
0.000
LjSGA_147985.1
Lotus japonicus
LjSGA_147985.1
I
0.000
LjT40B16.70.nc
Lotus japonicus
LjT40B16.70.nc
I
0.000
Lus10014578.g
Linum usitatissimum
Lus10014578.g
I
0.000
Lus10022316.g
Linum usitatissimum
Lus10022316.g
I
0.000
Lus10032108.g
Linum usitatissimum
Lus10032108.g
I
0.000
MDP0000846004
Malus domestica
MDP0000846004
I
0.000
MDP0000925348
Malus domestica
MDP0000925348
I
0.000
mgf026186m
Mimulus guttatus
mgf026186m
I
0.000
MTR_3g065100
Medicago truncatula
MTR_3g065100
I
0.000
MTR_3g466980
Medicago truncatula
MTR_3g466980
N
0.000
MTR_4g031910
Medicago truncatula
MTR_4g031910
N
0.000
MTR_8g036130
Medicago truncatula
MTR_8g036130
N
0.000
orange1.1g040642m.g
Citrus sinensis
orange1.1g040642m.g
I
0.000
Pm003257
Prunus mume
Pm003257
I
0.000
Pm004396
Prunus mume
Pm004396
I
0.000
POPTR_0005s00420
Populus trichocarpa
POPTR_0005s00420
I
0.000
POPTR_0013s00350
Populus trichocarpa
POPTR_0013s00350
I
0.000
POPTR_0013s01880
Populus trichocarpa
POPTR_0013s01880
I
0.000
PRUPE_ppa018168mg
Prunus persica
PRUPE_ppa018168mg
I
0.000
PRUPE_ppa019749mg
Prunus persica
PRUPE_ppa019749mg
I
0.000
SapurV1A.0066s0310
Salix purpurea
SapurV1A.0066s0310
I
0.000
SapurV1A.0442s0180
Salix purpurea
SapurV1A.0442s0180
I
0.000
SapurV1A.0442s0190
Salix purpurea
SapurV1A.0442s0190
I
0.000
Solyc01g102260.2
Solanum lycopersicum
Solyc01g102260.2
I
0.000
TCM_025670
Theobroma cacao
TCM_025670
I
0.000
TCM_025671
Theobroma cacao
TCM_025671
I
0.000
TCM_025676
Theobroma cacao
TCM_025676
N
0.000
TCM_026845
Theobroma cacao
TCM_026845
I
0.000
TCM_042799
Theobroma cacao
TCM_042799
I
0.000
TCM_042848
Theobroma cacao
TCM_042848
N
0.000
Thhalv10002346m.g
Eutrema salsugineum
Thhalv10002346m.g
I
0.000
Thhalv10002350m.g
Eutrema salsugineum
Thhalv10002350m.g
I
0.000
Thhalv10002352m.g
Eutrema salsugineum
Thhalv10002352m.g
I
0.000
Thhalv10002353m.g
Eutrema salsugineum
Thhalv10002353m.g
I
0.000
Thhalv10012000m.g
Eutrema salsugineum
Thhalv10012000m.g
I
0.000
Thhalv10019451m.g
Eutrema salsugineum
Thhalv10019451m.g
I
0.000
Thhalv10019481m.g
Eutrema salsugineum
Thhalv10019481m.g
I
0.000
Thhalv10019579m.g
Eutrema salsugineum
Thhalv10019579m.g
I
0.000
Thhalv10019731m.g
Eutrema salsugineum
Thhalv10019731m.g
I
0.000
Thhalv10019751m.g
Eutrema salsugineum
Thhalv10019751m.g
I
0.000
Thhalv10021183m.g
Eutrema salsugineum
Thhalv10021183m.g
I
0.000
Thhalv10022373m.g
Eutrema salsugineum
Thhalv10022373m.g
I
0.000
Thhalv10023873m.g
Eutrema salsugineum
Thhalv10023873m.g
I
0.000
Thhalv10024119m.g
Eutrema salsugineum
Thhalv10024119m.g
I
0.000
Thhalv10024162m.g
Eutrema salsugineum
Thhalv10024162m.g
I
0.000
Thhalv10027038m.g
Eutrema salsugineum
Thhalv10027038m.g
I
0.000
VIT_14s0060g00300
Vitis vinifera
VIT_14s0060g00300
I
0.000