Eucgr.B00699 (Eucalyptus grandis)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 Eucgr.B00699 T344796_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK12240.1
M01314_2.00 		Cannabis sativa
GGGSCCMS
SKGGSCCC		 PBM
Lambert et al.(2019)
pTH10180 		0.875 0.418
PK19717.1
M01318_2.00 		Cannabis sativa
GGGSCCCMC
GKGGGSCCC		 PBM
Lambert et al.(2019)
pTH10142 		0.874 0.479
TB1
M01312_2.00 		Oryza sativa
GGSCCCCCYM
KRGGGGGSCC		 PBM
Lambert et al.(2019)
pTH8740 		0.847 0.452
TCP1
M07276_2.00 		Arabidopsis thaliana
RNNNDNHNDNNNDDDNNNRKGGGRCCCACH
DGTGGGYCCCMYNNNHHHNNNHNDNHNNNY		 Dap-seq
OMalley et al.(2016)
TCP1_col_a 		0.825 0.390
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.B00699.1 TCP 129 274

Links

Other TCP family TFs
Other Eucalyptus grandis TFs

185 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCP1 Arabidopsis thaliana AT1G67260 D 0.825
TB1 Oryza sativa OS03G0706500 D 0.847
PK12240.1 Cannabis sativa PK12240.1 D 0.875
PK19717.1 Cannabis sativa PK19717.1 D 0.874
AC190734.2_FG003 Zea mays AC190734.2_FG003 I 0.837
AC233950.1_FG002 Zea mays AC233950.1_FG002 I 0.870
BRC2 Arabidopsis thaliana AT1G68800 I 0.896
BRC1 Arabidopsis thaliana AT3G18550 I 0.837
BGIOSGA013417 Oryza indica BGIOSGA013417 I 0.847
BGIOSGA030744 Oryza indica BGIOSGA030744 I 0.855
Bo1g117490 Brassica oleracea Bo1g117490 I 0.837
Bo2g055640 Brassica oleracea Bo2g055640 I 0.840
Bo2g061250 Brassica oleracea Bo2g061250 I 0.845
Bo3g071560 Brassica oleracea Bo3g071560 I 0.829
Bo6g099040 Brassica oleracea Bo6g099040 I 0.826
Bo6g103670 Brassica oleracea Bo6g103670 I 0.848
Bra001710 Brassica rapa Bra001710 I 0.837
Bra004097 Brassica rapa Bra004097 I 0.855
Bra004212 Brassica rapa Bra004212 I 0.830
Bra034010 Brassica rapa Bra034010 I 0.838
Bra037579 Brassica rapa Bra037579 I 0.837
Bra038350 Brassica rapa Bra038350 I 0.845
BRADI1G11060 Brachypodium distachyon BRADI1G11060 I 0.835
BRADI4G29980 Brachypodium distachyon BRADI4G29980 I 0.866
F775_01923 Aegilops tauschii F775_01923 I 0.847
TCP1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2001059 I 0.871
BRC2 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2000933 I 0.896
GLYMA04G22407 Glycine max GLYMA04G22407 I 0.894
GLYMA05G07943 Glycine max GLYMA05G07943 I 0.890
GLYMA10G39141 Glycine max GLYMA10G39141 I 0.831
GLYMA13G07475 Glycine max GLYMA13G07475 I 0.848
GLYMA17G13065 Glycine max GLYMA17G13065 I 0.922
GLYMA18G51581 Glycine max GLYMA18G51581 I 0.842
GLYMA19G05921 Glycine max GLYMA19G05921 I 0.848
GRMZM2G031905 Zea mays GRMZM2G031905 I 0.863
GRMZM2G055024 Zea mays GRMZM2G055024 I 0.845
GRMZM2G060319 Zea mays GRMZM2G060319 I 0.850
GRMZM2G062711 Zea mays GRMZM2G062711 I 0.855
GRMZM2G064628 Zea mays GRMZM2G064628 I 0.833
GRMZM2G110242 Zea mays GRMZM2G110242 I 0.859
GRMZM2G166687 Zea mays GRMZM2G166687 I 0.863
GSMUA_Achr10G25520_001 Musa acuminata GSMUA_Achr10G25520_001 I 0.827
GSMUA_Achr2G21050_001 Musa acuminata GSMUA_Achr2G21050_001 I 0.843
GSMUA_Achr2G22480_001 Musa acuminata GSMUA_Achr2G22480_001 I 0.881
LPERR03G25950 Leersia perrieri LPERR03G25950 I 0.834
LPERR08G12880 Leersia perrieri LPERR08G12880 I 0.857
LPERR09G06870 Leersia perrieri LPERR09G06870 I 0.833
MLOC_4614 Hordeum vulgare MLOC_4614 I 0.837
MLOC_58142 Hordeum vulgare MLOC_58142 I 0.828
MLOC_70116 Hordeum vulgare MLOC_70116 I 0.879
MTR_1g103380 Medicago truncatula MTR_1g103380 I 0.860
MTR_4g111935 Medicago truncatula MTR_4g111935 I 0.860
MTR_7g018500 Medicago truncatula MTR_7g018500 I 0.833
OBART03G31290 Oryza barthii OBART03G31290 I 0.830
OBART09G10040 Oryza barthii OBART09G10040 I 0.855
OGLUM03G31540 Oryza glumaepatula OGLUM03G31540 I 0.847
OGLUM09G10300 Oryza glumaepatula OGLUM09G10300 I 0.855
OMERI03G27910 Oryza meridionalis OMERI03G27910 I 0.830
OMERI09G07770 Oryza meridionalis OMERI09G07770 I 0.856
ONIVA03G32600 Oryza nivara ONIVA03G32600 I 0.847
ONIVA08G16720 Oryza nivara ONIVA08G16720 I 0.832
ONIVA09G09540 Oryza nivara ONIVA09G09540 I 0.855
OPUNC03G28490 Oryza punctata OPUNC03G28490 I 0.863
OPUNC08G13710 Oryza punctata OPUNC08G13710 I 0.822
OPUNC09G08520 Oryza punctata OPUNC09G08520 I 0.846
ORGLA03G0289500 Oryza glaberrima ORGLA03G0289500 I 0.830
ORGLA08G0137200 Oryza glaberrima ORGLA08G0137200 I 0.837
ORUFI03G32570 Oryza rufipogon ORUFI03G32570 I 0.847
ORUFI09G10660 Oryza rufipogon ORUFI09G10660 I 0.855
OS09G0410500 Oryza sativa OS09G0410500 I 0.855
PGSC0003DMG400000823 Solanum tuberosum PGSC0003DMG400000823 I 0.850
PGSC0003DMG400005705 Solanum tuberosum PGSC0003DMG400005705 I 0.877
PGSC0003DMG400007467 Solanum tuberosum PGSC0003DMG400007467 I 0.880
POPTR_0008s11470 Populus trichocarpa POPTR_0008s11470 I 0.871
POPTR_0010s14030 Populus trichocarpa POPTR_0010s14030 I 0.888
POPTR_0012s05660 Populus trichocarpa POPTR_0012s05660 I 0.917
POPTR_0015s03140 Populus trichocarpa POPTR_0015s03140 I 0.922
POPTR_0017s13980 Populus trichocarpa POPTR_0017s13980 I 0.881
PRUPE_ppa015026mg Prunus persica PRUPE_ppa015026mg I 0.906
PRUPE_ppa016240mg Prunus persica PRUPE_ppa016240mg I 0.857
PRUPE_ppa027156mg Prunus persica PRUPE_ppa027156mg I 0.872
Sb01g010690 Sorghum bicolor Sb01g010690 I 0.858
Sb02g024450 Sorghum bicolor Sb02g024450 I 0.833
Sb07g021140 Sorghum bicolor Sb07g021140 I 0.860
Si015230m.g Setaria italica Si015230m.g I 0.861
Si033183m.g Setaria italica Si033183m.g I 0.844
Si038692m.g Setaria italica Si038692m.g I 0.830
Solyc03g119770.2 Solanum lycopersicum Solyc03g119770.2 I 0.885
Solyc04g006980.1 Solanum lycopersicum Solyc04g006980.1 I 0.881
Solyc05g009900.1 Solanum lycopersicum Solyc05g009900.1 I 0.850
TCM_011874 Theobroma cacao TCM_011874 I 0.893
TCM_012252 Theobroma cacao TCM_012252 I 0.933
TCM_019518 Theobroma cacao TCM_019518 I 0.864
Traes_4AL_75D069945 Triticum aestivum Traes_4AL_75D069945 I 0.870
Traes_4BS_DC076554D Triticum aestivum Traes_4BS_DC076554D I 0.870
Traes_4DS_59A46B69A Triticum aestivum Traes_4DS_59A46B69A I 0.870
Traes_5BL_19F383CC71 Triticum aestivum Traes_5BL_19F383CC71 I 0.838
Traes_5DL_46A3B0DAB1 Triticum aestivum Traes_5DL_46A3B0DAB1 I 0.874
TRIUR3_20728 Triticum urartu TRIUR3_20728 I 0.837
TRIUR3_31795 Triticum urartu TRIUR3_31795 I 0.870
BRC2 Vitis vinifera VIT_01s0011g02920 I 0.870
TCP1 Vitis vinifera VIT_14s0083g00150 I 0.849
Cla002355 Citrullus lanatus Cla002355 I 0.880
Cla007227 Citrullus lanatus Cla007227 I 0.848
Cla016709 Citrullus lanatus Cla016709 I 0.868
Pm015499 Prunus mume Pm015499 I 0.871
Pm029002 Prunus mume Pm029002 I 0.857
Pm030202 Prunus mume Pm030202 I 0.906
29738.m001041 Ricinus communis 29738.m001041 I 0.870
30167.m000856 Ricinus communis 30167.m000856 I 0.875
30174.m008721 Ricinus communis 30174.m008721 I 0.917
cassava10552.m1 Manihot esculenta cassava10552.m1 I 0.884
cassava16230.m1 Manihot esculenta cassava16230.m1 I 0.867
cassava32886.m1 Manihot esculenta cassava32886.m1 I 0.930
cassava9378.m1 Manihot esculenta cassava9378.m1 I 0.919
Cucsa.031600 Cucumis sativus Cucsa.031600 I 0.866
Cucsa.238090 Cucumis sativus Cucsa.238090 I 0.882
Cucsa.280880 Cucumis sativus Cucsa.280880 I 0.905
Cucsa.283930 Cucumis sativus Cucsa.283930 I 0.900
mgf019480m Mimulus guttatus mgf019480m I 0.836
mgf022233m Mimulus guttatus mgf022233m I 0.872
mgf024687m Mimulus guttatus mgf024687m I 0.911
mgf026636m Mimulus guttatus mgf026636m I 0.834
Aquca_002_01093 Aquilegia coerulea Aquca_002_01093 I 0.900
Aquca_026_00208 Aquilegia coerulea Aquca_026_00208 I 0.888
Bostr.19424s0807 Boechera stricta Bostr.19424s0807 I 0.851
Bostr.26959s0002 Boechera stricta Bostr.26959s0002 I 0.896
Bostr.26959s0184 Boechera stricta Bostr.26959s0184 I 0.886
Cagra.1125s0016 Capsella grandiflora Cagra.1125s0016 I 0.870
Cagra.1157s0001 Capsella grandiflora Cagra.1157s0001 I 0.896
Cagra.1681s0023 Capsella grandiflora Cagra.1681s0023 I 0.847
Carubv10013748m.g Capsella rubella Carubv10013748m.g I 0.847
Carubv10020487m.g Capsella rubella Carubv10020487m.g I 0.896
Carubv10020555m.g Capsella rubella Carubv10020555m.g I 0.874
Ciclev10024246m.g Citrus clementina Ciclev10024246m.g I 0.924
Ciclev10033382m.g Citrus clementina Ciclev10033382m.g I 0.888
Eucgr.J01466 Eucalyptus grandis Eucgr.J01466 I 0.836
Eucgr.K02654 Eucalyptus grandis Eucgr.K02654 I 0.882
evm.TU.supercontig_1401.1 Carica papaya evm.TU.supercontig_1401.1 I 0.885
evm.TU.supercontig_179.29 Carica papaya evm.TU.supercontig_179.29 I 0.843
gene03882-v1.0-hybrid Fragaria vesca gene03882-v1.0-hybrid I 0.906
Gorai.001G200400 Gossypium raimondii Gorai.001G200400 I 0.869
Gorai.007G007500 Gossypium raimondii Gorai.007G007500 I 0.901
Gorai.008G186800 Gossypium raimondii Gorai.008G186800 I 0.887
Gorai.008G285300 Gossypium raimondii Gorai.008G285300 I 0.908
Lus10021713.g Linum usitatissimum Lus10021713.g I 0.905
Lus10035055.g Linum usitatissimum Lus10035055.g I 0.918
MDP0000173048 Malus domestica MDP0000173048 I 0.887
MDP0000272980 Malus domestica MDP0000272980 I 0.887
orange1.1g035911m.g Citrus sinensis orange1.1g035911m.g I 0.924
orange1.1g039323m.g Citrus sinensis orange1.1g039323m.g I 0.888
Pavir.Ba01820 Panicum virgatum Pavir.Ba01820 I 0.839
Pavir.Bb02154 Panicum virgatum Pavir.Bb02154 I 0.845
Pavir.Fa00870 Panicum virgatum Pavir.Fa00870 I 0.850
Pavir.Fb01590 Panicum virgatum Pavir.Fb01590 I 0.841
SapurV1A.0301s0010 Salix purpurea SapurV1A.0301s0010 I 0.903
SapurV1A.0304s0080 Salix purpurea SapurV1A.0304s0080 I 0.888
SapurV1A.0583s0060 Salix purpurea SapurV1A.0583s0060 I 0.921
SapurV1A.0682s0140 Salix purpurea SapurV1A.0682s0140 I 0.889
SapurV1A.1895s0010 Salix purpurea SapurV1A.1895s0010 I 0.898
SapurV1A.1895s0020 Salix purpurea SapurV1A.1895s0020 I 0.898
Thhalv10019499m.g Eutrema salsugineum Thhalv10019499m.g I 0.871
chr1.LjB10L14.10.nc Lotus japonicus chr1.LjB10L14.10.nc I 0.829
chr2.LjB17A04.40.nc Lotus japonicus chr2.LjB17A04.40.nc I 0.838
chr4.LjB15O07.110.nc Lotus japonicus chr4.LjB15O07.110.nc I 0.883
chr5.CM0357.550.nc Lotus japonicus chr5.CM0357.550.nc I 0.873
LjSGA_018294.2 Lotus japonicus LjSGA_018294.2 I 0.880
PDK_20s1689851g001 Phoenix dactylifera PDK_20s1689851g001 I 0.844
Bo5g117410 Brassica oleracea Bo5g117410 N 0.843
BRADI3G36590 Brachypodium distachyon BRADI3G36590 N 0.827
GLYMA06G23410 Glycine max GLYMA06G23410 N 0.854
PGSC0003DMG400004054 Solanum tuberosum PGSC0003DMG400004054 N 0.895
BRC1 Arabidopsis lyrata scaffold_302193.1 N 0.822
Solyc06g069240.1 Solanum lycopersicum Solyc06g069240.1 N 0.897
Traes_2BS_03909B330 Triticum aestivum Traes_2BS_03909B330 N 0.826
Cla018797 Citrullus lanatus Cla018797 N 0.839
Cla019282 Citrullus lanatus Cla019282 N 0.914
Cucsa.113660 Cucumis sativus Cucsa.113660 N 0.875
Cucsa.198860 Cucumis sativus Cucsa.198860 N 0.897
evm.TU.supercontig_13.48 Carica papaya evm.TU.supercontig_13.48 N 0.876
Lus10032465.g Linum usitatissimum Lus10032465.g N 0.825
MDP0000219838 Malus domestica MDP0000219838 N 0.887
MDP0000224810 Malus domestica MDP0000224810 N 0.912
Thhalv10021948m.g Eutrema salsugineum Thhalv10021948m.g N 0.844
PK16683.1 Cannabis sativa PK16683.1 N 0.830