PDK_20s1356112g004 (Phoenix dactylifera)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02042 (RWP-RK) IPR003035 PDK_20s1356112g004 T321327_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		0.918 0.918
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.857 0.857
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PDK_20s1356112g004 RWP-RK 570 618

Links

Other RWP-RK family TFs
Other Phoenix dactylifera TFs

417 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30147.m014313 Ricinus communis 30147.m014313 I 0.000
30190.m011119 Ricinus communis 30190.m011119 I 0.000
30190.m011120 Ricinus communis 30190.m011120 I 0.000
60638.m00016 Ricinus communis 60638.m00016 I 0.000
AMTR_s00069p00141520 Amborella trichopoda AMTR_s00069p00141520 I 0.000
AMTR_s00095p00096190 Amborella trichopoda AMTR_s00095p00096190 I 0.000
Aquca_012_00144 Aquilegia coerulea Aquca_012_00144 I 0.000
Aquca_013_00434 Aquilegia coerulea Aquca_013_00434 I 0.000
Aquca_013_00435 Aquilegia coerulea Aquca_013_00435 I 0.000
Aquca_013_00436 Aquilegia coerulea Aquca_013_00436 I 0.000
Aquca_122_00012 Aquilegia coerulea Aquca_122_00012 I 0.000
Bo01335s010 Brassica oleracea Bo01335s010 I 0.000
Bo8g108050 Brassica oleracea Bo8g108050 I 0.000
Bo9g104770 Brassica oleracea Bo9g104770 I 0.000
Bostr.13671s0200 Boechera stricta Bostr.13671s0200 I 0.000
Bostr.15774s0346 Boechera stricta Bostr.15774s0346 I 0.000
Bostr.22157s0019 Boechera stricta Bostr.22157s0019 I 0.000
Bostr.7867s0359 Boechera stricta Bostr.7867s0359 I 0.000
Bostr.7867s0360 Boechera stricta Bostr.7867s0360 I 0.000
Bostr.7867s0361 Boechera stricta Bostr.7867s0361 I 0.000
Bra016763 Brassica rapa Bra016763 I 0.000
Bra019777 Brassica rapa Bra019777 I 0.000
Bra026963 Brassica rapa Bra026963 I 0.000
Bra028290 Brassica rapa Bra028290 I 0.000
BRADI3G51630 Brachypodium distachyon BRADI3G51630 I 0.000
Cagra.0094s0011 Capsella grandiflora Cagra.0094s0011 I 0.000
Cagra.0568s0171 Capsella grandiflora Cagra.0568s0171 I 0.000
Cagra.2248s0026 Capsella grandiflora Cagra.2248s0026 I 0.000
Cagra.23885s0001 Capsella grandiflora Cagra.23885s0001 I 0.000
Cagra.28753s0001 Capsella grandiflora Cagra.28753s0001 I 0.000
Carubv10005709m.g Capsella rubella Carubv10005709m.g I 0.000
Carubv10006965m.g Capsella rubella Carubv10006965m.g I 0.000
Carubv10010303m.g Capsella rubella Carubv10010303m.g I 0.000
Carubv10021910m.g Capsella rubella Carubv10021910m.g I 0.000
Carubv10027759m.g Capsella rubella Carubv10027759m.g I 0.000
cassava17064.m1 Manihot esculenta cassava17064.m1 I 0.000
cassava18935.valid.m1 Manihot esculenta cassava18935.valid.m1 I 0.000
cassava35062.m1 Manihot esculenta cassava35062.m1 I 0.000
cassava41192.m1 Manihot esculenta cassava41192.m1 I 0.000
cassava41218.m1 Manihot esculenta cassava41218.m1 I 0.000
Ca_04504 Cicer arietinum Ca_04504 I 0.000
Ca_08732 Cicer arietinum Ca_08732 I 0.000
Ca_18948 Cicer arietinum Ca_18948 I 0.000
CBF2 Arabidopsis lyrata fgenesh2_kg.7__1712__AT4G25470.1 I 0.000
CBF4 Arabidopsis lyrata scaffold_801637.1 I 0.000
chr3.LjT42M03.60.nd Lotus japonicus chr3.LjT42M03.60.nd I 0.000
Ciclev10007068m.g Citrus clementina Ciclev10007068m.g I 0.000
Ciclev10021923m.g Citrus clementina Ciclev10021923m.g I 0.000
Cla002362 Citrullus lanatus Cla002362 I 0.000
Cla006315 Citrullus lanatus Cla006315 I 0.000
Cla011674 Citrullus lanatus Cla011674 I 0.000
Cucsa.166340 Cucumis sativus Cucsa.166340 I 0.000
Cucsa.251030 Cucumis sativus Cucsa.251030 I 0.000
Cucsa.302750 Cucumis sativus Cucsa.302750 I 0.000
DDF1 Arabidopsis lyrata fgenesh2_kg.1__1363__AT1G12610.1 D 0.000
ddf2 Arabidopsis lyrata fgenesh2_kg.2__175__AT1G63030.1 D 0.000
DREB1A Arabidopsis thaliana AT4G25480 D 0.000
DREB1C Arabidopsis thaliana AT4G25470 D 0.000
DREB1D Arabidopsis thaliana AT5G51990 D 0.000
DREB1F Arabidopsis thaliana AT1G12610 D 0.000
DREB1G Oryza indica BGIOSGA008804 I 0.000
DREB1G Oryza sativa OS02G0677300 D 0.000
Eucgr.A02818 Eucalyptus grandis Eucgr.A02818 I 0.000
Eucgr.A02830 Eucalyptus grandis Eucgr.A02830 I 0.000
Eucgr.D01925 Eucalyptus grandis Eucgr.D01925 I 0.000
Eucgr.E00529 Eucalyptus grandis Eucgr.E00529 I 0.000
evm.TU.supercontig_5.66 Carica papaya evm.TU.supercontig_5.66 I 0.000
gene13329-v1.0-hybrid Fragaria vesca gene13329-v1.0-hybrid I 0.000
gene32378-v1.0-hybrid Fragaria vesca gene32378-v1.0-hybrid I 0.000
GLYMA01G42500 Glycine max GLYMA01G42500 I 0.000
GLYMA05G03560 Glycine max GLYMA05G03560 I 0.000
GLYMA09G27180 Glycine max GLYMA09G27180 I 0.000
GLYMA10G38440 Glycine max GLYMA10G38440 I 0.000
GLYMA11G19341 Glycine max GLYMA11G19341 I 0.000
GLYMA12G09130 Glycine max GLYMA12G09130 I 0.000
GLYMA12G30740 Glycine max GLYMA12G30740 I 0.000
GLYMA13G39540 Glycine max GLYMA13G39540 I 0.000
GLYMA16G32330 Glycine max GLYMA16G32330 I 0.000
GLYMA17G14111 Glycine max GLYMA17G14111 I 0.000
GLYMA20G29410 Glycine max GLYMA20G29410 I 0.000
Gorai.003G162700 Gossypium raimondii Gorai.003G162700 I 0.000
Gorai.006G046200 Gossypium raimondii Gorai.006G046200 I 0.000
Gorai.007G010100 Gossypium raimondii Gorai.007G010100 I 0.000
Gorai.008G243600 Gossypium raimondii Gorai.008G243600 I 0.000
Gorai.008G280600 Gossypium raimondii Gorai.008G280600 I 0.000
GRMZM2G137341 Zea mays GRMZM2G137341 I 0.000
GSMUA_Achr11G21630_001 Musa acuminata GSMUA_Achr11G21630_001 I 0.000
GSMUA_Achr7G05900_001 Musa acuminata GSMUA_Achr7G05900_001 I 0.000
GSMUA_Achr8G11980_001 Musa acuminata GSMUA_Achr8G11980_001 I 0.000
LjSGA_037211.1 Lotus japonicus LjSGA_037211.1 I 0.000
LPERR02G22610 Leersia perrieri LPERR02G22610 I 0.000
Lus10001871.g Linum usitatissimum Lus10001871.g I 0.000
Lus10006332.g Linum usitatissimum Lus10006332.g I 0.000
Lus10006334.g Linum usitatissimum Lus10006334.g I 0.000
Lus10017829.g Linum usitatissimum Lus10017829.g I 0.000
Lus10027412.g Linum usitatissimum Lus10027412.g I 0.000
Lus10029601.g Linum usitatissimum Lus10029601.g I 0.000
Lus10029602.g Linum usitatissimum Lus10029602.g I 0.000
Lus10031657.g Linum usitatissimum Lus10031657.g I 0.000
MDP0000154764 Malus domestica MDP0000154764 I 0.000
MDP0000198054 Malus domestica MDP0000198054 I 0.000
mgf016974m Mimulus guttatus mgf016974m I 0.000
mgf017136m Mimulus guttatus mgf017136m I 0.000
mgf018631m Mimulus guttatus mgf018631m I 0.000
mgf018934m Mimulus guttatus mgf018934m I 0.000
mgf019061m Mimulus guttatus mgf019061m I 0.000
mgf022408m Mimulus guttatus mgf022408m I 0.000
mgf026339m Mimulus guttatus mgf026339m I 0.000
mgf026642m Mimulus guttatus mgf026642m I 0.000
MLOC_75886 Hordeum vulgare MLOC_75886 I 0.000
MTR_1g101600 Medicago truncatula MTR_1g101600 I 0.000
MTR_2g085015 Medicago truncatula MTR_2g085015 I 0.000
MTR_4g102660 Medicago truncatula MTR_4g102660 I 0.000
MTR_5g010930 Medicago truncatula MTR_5g010930 I 0.000
MTR_6g465420 Medicago truncatula MTR_6g465420 I 0.000
MTR_6g465430 Medicago truncatula MTR_6g465430 I 0.000
MTR_6g465450 Medicago truncatula MTR_6g465450 I 0.000
MTR_6g465460 Medicago truncatula MTR_6g465460 I 0.000
MTR_6g465510 Medicago truncatula MTR_6g465510 I 0.000
MTR_6g465530 Medicago truncatula MTR_6g465530 I 0.000
MTR_6g465690 Medicago truncatula MTR_6g465690 I 0.000
MTR_6g465850 Medicago truncatula MTR_6g465850 I 0.000
MTR_6g466000 Medicago truncatula MTR_6g466000 I 0.000
MTR_6g466130 Medicago truncatula MTR_6g466130 I 0.000
MTR_8g006410 Medicago truncatula MTR_8g006410 I 0.000
OBART02G27760 Oryza barthii OBART02G27760 I 0.000
OGLUM02G28340 Oryza glumaepatula OGLUM02G28340 I 0.000
OMERI02G26980 Oryza meridionalis OMERI02G26980 I 0.000
ONIVA02G30790 Oryza nivara ONIVA02G30790 I 0.000
OPUNC02G25480 Oryza punctata OPUNC02G25480 I 0.000
orange1.1g026103m.g Citrus sinensis orange1.1g026103m.g I 0.000
orange1.1g028094m.g Citrus sinensis orange1.1g028094m.g I 0.000
orange1.1g029015m.g Citrus sinensis orange1.1g029015m.g I 0.000
ORUFI02G29230 Oryza rufipogon ORUFI02G29230 I 0.000
Pavir.Aa00912 Panicum virgatum Pavir.Aa00912 I 0.000
Pavir.Ab02685 Panicum virgatum Pavir.Ab02685 I 0.000
PGSC0003DMG400004255 Solanum tuberosum PGSC0003DMG400004255 I 0.000
PGSC0003DMG400012524 Solanum tuberosum PGSC0003DMG400012524 I 0.000
PGSC0003DMG400012525 Solanum tuberosum PGSC0003DMG400012525 I 0.000
PGSC0003DMG400012526 Solanum tuberosum PGSC0003DMG400012526 I 0.000
PGSC0003DMG400014309 Solanum tuberosum PGSC0003DMG400014309 I 0.000
PGSC0003DMG400014310 Solanum tuberosum PGSC0003DMG400014310 I 0.000
PGSC0003DMG400014311 Solanum tuberosum PGSC0003DMG400014311 I 0.000
PGSC0003DMG400038366 Solanum tuberosum PGSC0003DMG400038366 I 0.000
PK23332.1 Cannabis sativa PK23332.1 I 0.000
Pm019386 Prunus mume Pm019386 I 0.000
Pm023769 Prunus mume Pm023769 I 0.000
Pm023772 Prunus mume Pm023772 I 0.000
Pm023775 Prunus mume Pm023775 I 0.000
POPTR_0001s08710 Populus trichocarpa POPTR_0001s08710 I 0.000
POPTR_0001s08720 Populus trichocarpa POPTR_0001s08720 I 0.000
POPTR_0004s19820 Populus trichocarpa POPTR_0004s19820 I 0.000
POPTR_0009s14990 Populus trichocarpa POPTR_0009s14990 I 0.000
POPTR_0012s13870 Populus trichocarpa POPTR_0012s13870 I 0.000
POPTR_0015s13830 Populus trichocarpa POPTR_0015s13830 I 0.000
PRUPE_ppa010800mg Prunus persica PRUPE_ppa010800mg I 0.000
PRUPE_ppa010909mg Prunus persica PRUPE_ppa010909mg I 0.000
PRUPE_ppa010935mg Prunus persica PRUPE_ppa010935mg I 0.000
PRUPE_ppa014628mg Prunus persica PRUPE_ppa014628mg N 0.000
PRUPE_ppa017761mg Prunus persica PRUPE_ppa017761mg I 0.000
PRUPE_ppa021197mg Prunus persica PRUPE_ppa021197mg I 0.000
SapurV1A.0045s0710 Salix purpurea SapurV1A.0045s0710 I 0.000
SapurV1A.0068s0560 Salix purpurea SapurV1A.0068s0560 I 0.000
SapurV1A.0219s0320 Salix purpurea SapurV1A.0219s0320 I 0.000
SapurV1A.0282s0070 Salix purpurea SapurV1A.0282s0070 I 0.000
SapurV1A.0282s0080 Salix purpurea SapurV1A.0282s0080 I 0.000
SapurV1A.0400s0160 Salix purpurea SapurV1A.0400s0160 I 0.000
Sb04g031950 Sorghum bicolor Sb04g031950 I 0.000
Si018262m.g Setaria italica Si018262m.g I 0.000
Solyc01g009440.1 Solanum lycopersicum Solyc01g009440.1 I 0.000
Solyc03g026270.1 Solanum lycopersicum Solyc03g026270.1 I 0.000
Solyc03g026280.2 Solanum lycopersicum Solyc03g026280.2 I 0.000
Solyc03g124110.1 Solanum lycopersicum Solyc03g124110.1 I 0.000
Solyc08g007820.1 Solanum lycopersicum Solyc08g007820.1 I 0.000
Solyc08g007830.1 Solanum lycopersicum Solyc08g007830.1 I 0.000
TCM_016175 Theobroma cacao TCM_016175 I 0.000
Thhalv10009978m.g Eutrema salsugineum Thhalv10009978m.g I 0.000
Thhalv10015252m.g Eutrema salsugineum Thhalv10015252m.g I 0.000
Thhalv10023865m.g Eutrema salsugineum Thhalv10023865m.g I 0.000
Thhalv10027405m.g Eutrema salsugineum Thhalv10027405m.g I 0.000
VIT_02s0025g04460 Vitis vinifera VIT_02s0025g04460 I 0.000
VIT_06s0061g01400 Vitis vinifera VIT_06s0061g01400 I 0.000
VIT_11s0016g02140 Vitis vinifera VIT_11s0016g02140 I 0.000
VIT_16s0100g00380 Vitis vinifera VIT_16s0100g00380 I 0.000