SapurV1A.0215s0070 (Salix purpurea)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 SapurV1A.0215s0070 T247279_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LBD13
M06956_2.00 		Arabidopsis thaliana
YGSCGDNDDHNVCGGHG
CDCCGBNDHHNHCGSCR		 Dap-seq
OMalley et al.(2016)
LBD13_col_a 		0.838 0.838
LBD13
M06957_2.00 		Arabidopsis thaliana
CGSCGNNDDWNNCGG
CCGNNWHHNNCGSCG		 Dap-seq
OMalley et al.(2016)
LBD13_colamp_a 		0.838 0.838
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0215s0070.1.p LOB 42 140
SapurV1A.0215s0070.2.p LOB 18 116
SapurV1A.0215s0070.3.p LOB 18 116

Links

Other LOB family TFs
Other Salix purpurea TFs

152 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0019s14790 Populus trichocarpa POPTR_0019s14790 I 1.000
SapurV1A.0222s0070 Salix purpurea SapurV1A.0222s0070 I 0.939
POPTR_0013s15220 Populus trichocarpa POPTR_0013s15220 I 0.939
GLYMA14G38280 Glycine max GLYMA14G38280 I 0.919
TCM_042262 Theobroma cacao TCM_042262 I 0.909
GLYMA02G40080 Glycine max GLYMA02G40080 I 0.909
Aquca_005_00169 Aquilegia coerulea Aquca_005_00169 I 0.909
29729.m002335 Ricinus communis 29729.m002335 I 0.909
Solyc06g007390.2 Solanum lycopersicum Solyc06g007390.2 I 0.899
TCM_045438 Theobroma cacao TCM_045438 I 0.899
evm.TU.supercontig_2.327 Carica papaya evm.TU.supercontig_2.327 I 0.899
Gorai.003G151800 Gossypium raimondii Gorai.003G151800 I 0.899
Gorai.009G295000 Gossypium raimondii Gorai.009G295000 I 0.899
LBD15 Vitis vinifera VIT_13s0067g02380 I 0.899
Eucgr.G03121 Eucalyptus grandis Eucgr.G03121 I 0.899
cassava15554.m1 Manihot esculenta cassava15554.m1 I 0.899
cassava20848.m1 Manihot esculenta cassava20848.m1 I 0.889
PGSC0003DMG400030461 Solanum tuberosum PGSC0003DMG400030461 I 0.889
PGSC0003DMG400020562 Solanum tuberosum PGSC0003DMG400020562 I 0.889
Lus10009930.g Linum usitatissimum Lus10009930.g I 0.889
Lus10024183.g Linum usitatissimum Lus10024183.g I 0.889
Eucgr.B04019 Eucalyptus grandis Eucgr.B04019 I 0.889
MTR_5g075020 Medicago truncatula MTR_5g075020 I 0.889
29957.m001411 Ricinus communis 29957.m001411 I 0.889
Ca_15642 Cicer arietinum Ca_15642 I 0.889
PRUPE_ppa011757mg Prunus persica PRUPE_ppa011757mg I 0.889
mgf011471m Mimulus guttatus mgf011471m I 0.879
gene21311-v1.0-hybrid Fragaria vesca gene21311-v1.0-hybrid I 0.879
PK17217.1 Cannabis sativa PK17217.1 I 0.879
Cagra.1642s0010 Capsella grandiflora Cagra.1642s0010 I 0.879
AMTR_s00007p00227160 Amborella trichopoda AMTR_s00007p00227160 I 0.879
LBD15 Arabidopsis lyrata fgenesh2_kg.4__2164__AT2G40470.1 I 0.879
Solyc06g082430.1 Solanum lycopersicum Solyc06g082430.1 I 0.879
Bostr.23794s0013 Boechera stricta Bostr.23794s0013 I 0.879
evm.TU.supercontig_19.92 Carica papaya evm.TU.supercontig_19.92 I 0.879
Carubv10024002m.g Capsella rubella Carubv10024002m.g I 0.879
Ciclev10002348m.g Citrus clementina Ciclev10002348m.g I 0.879
Gorai.012G015900 Gossypium raimondii Gorai.012G015900 I 0.879
GLYMA04G39830 Glycine max GLYMA04G39830 I 0.879
Gorai.013G005900 Gossypium raimondii Gorai.013G005900 I 0.879
GSMUA_Achr11G08330_001 Musa acuminata GSMUA_Achr11G08330_001 I 0.879
GLYMA06G15050 Glycine max GLYMA06G15050 I 0.879
orange1.1g028221m.g Citrus sinensis orange1.1g028221m.g I 0.879
LBD15 Arabidopsis thaliana AT2G40470 I 0.879
cassava31953.m1 Manihot esculenta cassava31953.m1 I 0.879
PGSC0003DMG400029080 Solanum tuberosum PGSC0003DMG400029080 I 0.869
Solyc06g050430.2 Solanum lycopersicum Solyc06g050430.2 I 0.869
chr2.CM1032.110.nc Lotus japonicus chr2.CM1032.110.nc I 0.869
Bra016992 Brassica rapa Bra016992 I 0.869
Bo3g034980 Brassica oleracea Bo3g034980 I 0.869
Bra004572 Brassica rapa Bra004572 I 0.869
Bra000188 Brassica rapa Bra000188 I 0.869
Bo4g012620 Brassica oleracea Bo4g012620 I 0.869
Cla007391 Citrullus lanatus Cla007391 I 0.869
Thhalv10017905m.g Eutrema salsugineum Thhalv10017905m.g I 0.869
Si012018m.g Setaria italica Si012018m.g I 0.859
Bo4g190210 Brassica oleracea Bo4g190210 I 0.859
MDP0000278334 Malus domestica MDP0000278334 I 0.859
Cucsa.144080 Cucumis sativus Cucsa.144080 I 0.859
gw1.156.75.1 Physcomitrella patens gw1.156.75.1 I 0.859
PRUPE_ppa019397mg Prunus persica PRUPE_ppa019397mg I 0.859
POPTR_0013s08040 Populus trichocarpa POPTR_0013s08040 I 0.859
gene28137-v1.0-hybrid Fragaria vesca gene28137-v1.0-hybrid I 0.859
chr1.CM0125.30.nd Lotus japonicus chr1.CM0125.30.nd I 0.859
MTR_3g094690 Medicago truncatula MTR_3g094690 I 0.848
LBD13 Arabidopsis lyrata fgenesh2_kg.4__1005__AT2G30340.1 I 0.848
Bo4g172950 Brassica oleracea Bo4g172950 I 0.848
OMERI05G04500 Oryza meridionalis OMERI05G04500 I 0.848
OGLUM05G04450 Oryza glumaepatula OGLUM05G04450 I 0.848
MTR_5g083960 Medicago truncatula MTR_5g083960 I 0.848
Bra021627 Brassica rapa Bra021627 I 0.848
gw1.9.232.1 Physcomitrella patens gw1.9.232.1 I 0.848
OBART05G04570 Oryza barthii OBART05G04570 I 0.848
Pavir.J00291 Panicum virgatum Pavir.J00291 I 0.848
Pm000277 Prunus mume Pm000277 I 0.848
Ciclev10032684m.g Citrus clementina Ciclev10032684m.g I 0.848
Sb09g004940 Sorghum bicolor Sb09g004940 I 0.848
ORGLA05G0042200 Oryza glaberrima ORGLA05G0042200 I 0.848
ORUFI05G04770 Oryza rufipogon ORUFI05G04770 I 0.848
Ca_04126 Cicer arietinum Ca_04126 I 0.848
orange1.1g027307m.g Citrus sinensis orange1.1g027307m.g I 0.848
ONIVA05G04920 Oryza nivara ONIVA05G04920 I 0.848
BGIOSGA018747 Oryza indica BGIOSGA018747 I 0.848
OS05G0165450 Oryza sativa OS05G0165450 I 0.848
GSMUA_Achr5G07460_001 Musa acuminata GSMUA_Achr5G07460_001 I 0.838
Bra018320 Brassica rapa Bra018320 I 0.838
GSMUA_AchrUn_randomG14060_001 Musa acuminata GSMUA_AchrUn_randomG14060_001 I 0.838
Bostr.24513s0205 Boechera stricta Bostr.24513s0205 I 0.838
Pavir.Ca01098 Panicum virgatum Pavir.Ca01098 I 0.838
Thhalv10017073m.g Eutrema salsugineum Thhalv10017073m.g I 0.838
Cagra.0567s0001 Capsella grandiflora Cagra.0567s0001 I 0.838
GRMZM5G868471 Zea mays GRMZM5G868471 I 0.838
LBD13 Arabidopsis thaliana AT2G30340 D 0.838
Bo4g059520 Brassica oleracea Bo4g059520 I 0.838
mgf020556m Mimulus guttatus mgf020556m I 0.838
Carubv10024870m.g Capsella rubella Carubv10024870m.g I 0.828
F775_25790 Aegilops tauschii F775_25790 I 0.828
MLOC_16076 Hordeum vulgare MLOC_16076 I 0.828
BRADI2G53690 Brachypodium distachyon BRADI2G53690 I 0.828
F775_52636 Aegilops tauschii F775_52636 I 0.828
Sb03g038410 Sorghum bicolor Sb03g038410 I 0.828
MLOC_56075 Hordeum vulgare MLOC_56075 I 0.828
Ca_12420 Cicer arietinum Ca_12420 I 0.828
LPERR05G04040 Leersia perrieri LPERR05G04040 I 0.828
Traes_1AS_43FB6A3CF Triticum aestivum Traes_1AS_43FB6A3CF I 0.828
TRIUR3_34193 Triticum urartu TRIUR3_34193 I 0.828
LBD13 Vitis vinifera VIT_06s0004g07790 I 0.828
Traes_1DS_BB8508CC6 Triticum aestivum Traes_1DS_BB8508CC6 I 0.828
GSMUA_Achr7G22200_001 Musa acuminata GSMUA_Achr7G22200_001 I 0.828
Traes_1BS_8F922CA93 Triticum aestivum Traes_1BS_8F922CA93 I 0.828
OGLUM01G39690 Oryza glumaepatula OGLUM01G39690 I 0.818
OBART01G35680 Oryza barthii OBART01G35680 I 0.818
BGIOSGA004719 Oryza indica BGIOSGA004719 I 0.818
OLONG_000658 Oryza longistaminata OLONG_000658 I 0.818
LPERR01G30700 Leersia perrieri LPERR01G30700 I 0.818
OS01G0825000 Oryza sativa OS01G0825000 I 0.818
BRADI2G34520 Brachypodium distachyon BRADI2G34520 I 0.818
TRAES3BF078900060CFD_g Triticum aestivum TRAES3BF078900060CFD_g I 0.818
Cucsa.326100 Cucumis sativus Cucsa.326100 I 0.818
Si004575m.g Setaria italica Si004575m.g I 0.818
ORUFI01G39050 Oryza rufipogon ORUFI01G39050 I 0.818
OMERI01G32750 Oryza meridionalis OMERI01G32750 I 0.818
ORGLA01G0294900 Oryza glaberrima ORGLA01G0294900 I 0.818
ONIVA01G40640 Oryza nivara ONIVA01G40640 I 0.818
Lus10034208.g Linum usitatissimum Lus10034208.g I 0.808
Pavir.Eb03580 Panicum virgatum Pavir.Eb03580 I 0.808
SELMODRAFT_37169 Selaginella moellendorffii SELMODRAFT_37169 I 0.808
OB01G44400 Oryza brachyantha OB01G44400 I 0.808
GRMZM2G092517 Zea mays GRMZM2G092517 I 0.808
SELMODRAFT_26920 Selaginella moellendorffii SELMODRAFT_26920 I 0.808
OPUNC01G34540 Oryza punctata OPUNC01G34540 I 0.808
Pavir.Ea03276 Panicum virgatum Pavir.Ea03276 I 0.798
Lus10029061.g Linum usitatissimum Lus10029061.g I 0.798
Bo4g190140 Brassica oleracea Bo4g190140 I 0.789
PDK_20s1387061g002 Phoenix dactylifera PDK_20s1387061g002 I 0.778
OB05G14280 Oryza brachyantha OB05G14280 I 0.768
PDK_20s1537041g001 Phoenix dactylifera PDK_20s1537041g001 N 0.763
OLONG_007328 Oryza longistaminata OLONG_007328 I 0.758
PK18922.1 Cannabis sativa PK18922.1 I 0.719
SapurV1A.0085s0450 Salix purpurea SapurV1A.0085s0450 I 0.717
mgf026046m Mimulus guttatus mgf026046m I 0.717
PDK_20s1448121g001 Phoenix dactylifera PDK_20s1448121g001 N 0.712
Si037583m.g Setaria italica Si037583m.g I 0.707
SELMODRAFT_58936 Selaginella moellendorffii SELMODRAFT_58936 I 0.707
SELMODRAFT_48883 Selaginella moellendorffii SELMODRAFT_48883 I 0.707
Sb01g012810 Sorghum bicolor Sb01g012810 I 0.707
Aquca_118_00035 Aquilegia coerulea Aquca_118_00035 I 0.707
Ciclev10006113m.g Citrus clementina Ciclev10006113m.g I 0.707
Pavir.Ia01095 Panicum virgatum Pavir.Ia01095 I 0.707
orange1.1g044340m.g Citrus sinensis orange1.1g044340m.g I 0.707
Pavir.Ib04170 Panicum virgatum Pavir.Ib04170 I 0.707