F775_52636 (Aegilops tauschii)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 F775_52636 T245142_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LBD13
M06956_2.00 		Arabidopsis thaliana
YGSCGDNDDHNVCGGHG
CDCCGBNDHHNHCGSCR		 Dap-seq
OMalley et al.(2016)
LBD13_col_a 		0.818 0.818
LBD13
M06957_2.00 		Arabidopsis thaliana
CGSCGNNDDWNNCGG
CCGNNWHHNNCGSCG		 Dap-seq
OMalley et al.(2016)
LBD13_colamp_a 		0.818 0.818
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EMT09775 LOB 56 154

Links

Other LOB family TFs
Other Aegilops tauschii TFs

167 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Traes_1DS_BB8508CC6 Triticum aestivum Traes_1DS_BB8508CC6 I 1.000
Traes_1BS_8F922CA93 Triticum aestivum Traes_1BS_8F922CA93 I 1.000
Traes_1AS_43FB6A3CF Triticum aestivum Traes_1AS_43FB6A3CF I 1.000
MLOC_56075 Hordeum vulgare MLOC_56075 I 1.000
TRIUR3_18328 Triticum urartu TRIUR3_18328 I 0.986
BGIOSGA018747 Oryza indica BGIOSGA018747 I 0.980
ORGLA05G0042200 Oryza glaberrima ORGLA05G0042200 I 0.980
BRADI2G34520 Brachypodium distachyon BRADI2G34520 I 0.980
ORUFI05G04770 Oryza rufipogon ORUFI05G04770 I 0.980
OGLUM05G04450 Oryza glumaepatula OGLUM05G04450 I 0.980
OBART05G04570 Oryza barthii OBART05G04570 I 0.980
OS05G0165450 Oryza sativa OS05G0165450 I 0.980
OMERI05G04500 Oryza meridionalis OMERI05G04500 I 0.980
ONIVA05G04920 Oryza nivara ONIVA05G04920 I 0.980
OB05G14280 Oryza brachyantha OB05G14280 I 0.977
OLONG_007328 Oryza longistaminata OLONG_007328 I 0.976
LPERR05G04040 Leersia perrieri LPERR05G04040 I 0.970
Si012018m.g Setaria italica Si012018m.g I 0.949
Pavir.J00291 Panicum virgatum Pavir.J00291 I 0.939
Sb09g004940 Sorghum bicolor Sb09g004940 I 0.939
GRMZM5G868471 Zea mays GRMZM5G868471 I 0.929
Pavir.Ca01098 Panicum virgatum Pavir.Ca01098 I 0.929
PK21617.1 Cannabis sativa PK21617.1 I 0.891
Bostr.23794s0013 Boechera stricta Bostr.23794s0013 I 0.879
LBD15 Arabidopsis lyrata fgenesh2_kg.4__2164__AT2G40470.1 I 0.879
Carubv10024002m.g Capsella rubella Carubv10024002m.g I 0.879
Cagra.1642s0010 Capsella grandiflora Cagra.1642s0010 I 0.879
LBD15 Arabidopsis thaliana AT2G40470 I 0.879
cassava15554.m1 Manihot esculenta cassava15554.m1 I 0.869
evm.TU.supercontig_19.92 Carica papaya evm.TU.supercontig_19.92 I 0.869
OLONG_000658 Oryza longistaminata OLONG_000658 I 0.869
Aquca_005_00169 Aquilegia coerulea Aquca_005_00169 I 0.869
OGLUM01G39690 Oryza glumaepatula OGLUM01G39690 I 0.869
Thhalv10017905m.g Eutrema salsugineum Thhalv10017905m.g I 0.869
ONIVA01G40640 Oryza nivara ONIVA01G40640 I 0.869
Si004575m.g Setaria italica Si004575m.g I 0.869
OS01G0825000 Oryza sativa OS01G0825000 I 0.869
OBART01G35680 Oryza barthii OBART01G35680 I 0.869
AMTR_s00007p00227160 Amborella trichopoda AMTR_s00007p00227160 I 0.869
ORGLA01G0294900 Oryza glaberrima ORGLA01G0294900 I 0.869
LBD15 Vitis vinifera VIT_13s0067g02380 I 0.869
Gorai.009G295000 Gossypium raimondii Gorai.009G295000 I 0.869
TCM_045438 Theobroma cacao TCM_045438 I 0.869
OMERI01G32750 Oryza meridionalis OMERI01G32750 I 0.869
ORUFI01G39050 Oryza rufipogon ORUFI01G39050 I 0.869
GSMUA_AchrUn_randomG14060_001 Musa acuminata GSMUA_AchrUn_randomG14060_001 I 0.869
PK17217.1 Cannabis sativa PK17217.1 I 0.869
GSMUA_Achr11G08330_001 Musa acuminata GSMUA_Achr11G08330_001 I 0.869
Bra000188 Brassica rapa Bra000188 I 0.869
LPERR01G30700 Leersia perrieri LPERR01G30700 I 0.869
BRADI2G53690 Brachypodium distachyon BRADI2G53690 I 0.869
Bo3g034980 Brassica oleracea Bo3g034980 I 0.869
BGIOSGA004719 Oryza indica BGIOSGA004719 I 0.869
Bra004572 Brassica rapa Bra004572 I 0.859
TCM_042262 Theobroma cacao TCM_042262 I 0.859
OB01G44400 Oryza brachyantha OB01G44400 I 0.859
Sb03g038410 Sorghum bicolor Sb03g038410 I 0.859
TRIUR3_34193 Triticum urartu TRIUR3_34193 I 0.859
29729.m002335 Ricinus communis 29729.m002335 I 0.859
Bo4g012620 Brassica oleracea Bo4g012620 I 0.859
cassava20848.m1 Manihot esculenta cassava20848.m1 I 0.859
Cla007391 Citrullus lanatus Cla007391 I 0.859
chr2.CM1032.110.nc Lotus japonicus chr2.CM1032.110.nc I 0.859
PRUPE_ppa011757mg Prunus persica PRUPE_ppa011757mg I 0.859
Gorai.003G151800 Gossypium raimondii Gorai.003G151800 I 0.859
Bo4g190210 Brassica oleracea Bo4g190210 I 0.859
F775_25790 Aegilops tauschii F775_25790 I 0.859
GRMZM2G092517 Zea mays GRMZM2G092517 I 0.859
OPUNC01G34540 Oryza punctata OPUNC01G34540 I 0.859
GSMUA_Achr5G07460_001 Musa acuminata GSMUA_Achr5G07460_001 I 0.859
MLOC_16076 Hordeum vulgare MLOC_16076 I 0.859
Pavir.Eb03580 Panicum virgatum Pavir.Eb03580 I 0.859
TRAES3BF078900060CFD_g Triticum aestivum TRAES3BF078900060CFD_g I 0.848
Gorai.012G015900 Gossypium raimondii Gorai.012G015900 I 0.848
Solyc06g050430.2 Solanum lycopersicum Solyc06g050430.2 I 0.848
mgf020556m Mimulus guttatus mgf020556m I 0.848
Eucgr.G03121 Eucalyptus grandis Eucgr.G03121 I 0.848
evm.TU.supercontig_2.327 Carica papaya evm.TU.supercontig_2.327 I 0.848
gene21311-v1.0-hybrid Fragaria vesca gene21311-v1.0-hybrid I 0.848
Ciclev10032684m.g Citrus clementina Ciclev10032684m.g I 0.848
Ca_04126 Cicer arietinum Ca_04126 I 0.848
GSMUA_Achr7G22200_001 Musa acuminata GSMUA_Achr7G22200_001 I 0.848
Bra016992 Brassica rapa Bra016992 I 0.848
GLYMA04G39830 Glycine max GLYMA04G39830 I 0.848
POPTR_0013s08040 Populus trichocarpa POPTR_0013s08040 I 0.848
GLYMA06G15050 Glycine max GLYMA06G15050 I 0.848
orange1.1g027307m.g Citrus sinensis orange1.1g027307m.g I 0.848
PGSC0003DMG400029080 Solanum tuberosum PGSC0003DMG400029080 I 0.848
Pavir.Ea03276 Panicum virgatum Pavir.Ea03276 I 0.848
MDP0000167580 Malus domestica MDP0000167580 I 0.840
Cucsa.144080 Cucumis sativus Cucsa.144080 I 0.838
Lus10009930.g Linum usitatissimum Lus10009930.g I 0.838
Lus10024183.g Linum usitatissimum Lus10024183.g I 0.838
GLYMA14G38280 Glycine max GLYMA14G38280 I 0.838
PK05388.1 Cannabis sativa PK05388.1 I 0.833
mgf011471m Mimulus guttatus mgf011471m I 0.828
POPTR_0019s14790 Populus trichocarpa POPTR_0019s14790 I 0.828
MTR_5g083960 Medicago truncatula MTR_5g083960 I 0.828
MDP0000278334 Malus domestica MDP0000278334 I 0.828
Bo4g172950 Brassica oleracea Bo4g172950 I 0.828
Gorai.013G005900 Gossypium raimondii Gorai.013G005900 I 0.828
Bra021627 Brassica rapa Bra021627 I 0.828
LBD13 Arabidopsis lyrata fgenesh2_kg.4__1005__AT2G30340.1 I 0.828
chr1.CM0125.30.nd Lotus japonicus chr1.CM0125.30.nd I 0.828
SapurV1A.0215s0070 Salix purpurea SapurV1A.0215s0070 I 0.828
MTR_5g075020 Medicago truncatula MTR_5g075020 I 0.828
Lus10034208.g Linum usitatissimum Lus10034208.g I 0.828
Bostr.24513s0205 Boechera stricta Bostr.24513s0205 I 0.818
Cagra.0567s0001 Capsella grandiflora Cagra.0567s0001 I 0.818
LBD13 Arabidopsis thaliana AT2G30340 D 0.818
Bra018320 Brassica rapa Bra018320 I 0.818
Bo4g059520 Brassica oleracea Bo4g059520 I 0.818
Lus10029061.g Linum usitatissimum Lus10029061.g I 0.818
GLYMA02G40080 Glycine max GLYMA02G40080 I 0.818
Thhalv10017073m.g Eutrema salsugineum Thhalv10017073m.g I 0.818
gene28137-v1.0-hybrid Fragaria vesca gene28137-v1.0-hybrid I 0.818
MTR_3g094690 Medicago truncatula MTR_3g094690 I 0.818
Ca_15642 Cicer arietinum Ca_15642 I 0.818
Ca_12420 Cicer arietinum Ca_12420 I 0.818
evm.TU.supercontig_331.6 Carica papaya evm.TU.supercontig_331.6 I 0.809
Carubv10024870m.g Capsella rubella Carubv10024870m.g I 0.808
Eucgr.B04019 Eucalyptus grandis Eucgr.B04019 I 0.808
Solyc06g007390.2 Solanum lycopersicum Solyc06g007390.2 I 0.808
29957.m001411 Ricinus communis 29957.m001411 I 0.808
LBD13 Vitis vinifera VIT_06s0004g07790 I 0.808
PGSC0003DMG400030461 Solanum tuberosum PGSC0003DMG400030461 I 0.808
PRUPE_ppa019397mg Prunus persica PRUPE_ppa019397mg I 0.808
Cucsa.326100 Cucumis sativus Cucsa.326100 I 0.808
gw1.9.232.1 Physcomitrella patens gw1.9.232.1 I 0.808
gw1.156.75.1 Physcomitrella patens gw1.156.75.1 I 0.808
LjSGA_040320.1 Lotus japonicus LjSGA_040320.1 I 0.804
POPTR_0013s15220 Populus trichocarpa POPTR_0013s15220 I 0.798
SapurV1A.0222s0070 Salix purpurea SapurV1A.0222s0070 I 0.798
Solyc06g082430.1 Solanum lycopersicum Solyc06g082430.1 I 0.798
PGSC0003DMG400020562 Solanum tuberosum PGSC0003DMG400020562 I 0.798
orange1.1g028221m.g Citrus sinensis orange1.1g028221m.g I 0.798
Ciclev10002348m.g Citrus clementina Ciclev10002348m.g I 0.798
Pm000277 Prunus mume Pm000277 I 0.798
PDK_20s1387061g002 Phoenix dactylifera PDK_20s1387061g002 I 0.789
Pm019028 Prunus mume Pm019028 I 0.782
cassava31953.m1 Manihot esculenta cassava31953.m1 I 0.778
PDK_20s1537041g001 Phoenix dactylifera PDK_20s1537041g001 N 0.763
SELMODRAFT_26920 Selaginella moellendorffii SELMODRAFT_26920 I 0.758
SELMODRAFT_37169 Selaginella moellendorffii SELMODRAFT_37169 I 0.758
Bo4g190140 Brassica oleracea Bo4g190140 I 0.737
PK03716.1 Cannabis sativa PK03716.1 I 0.735
mgf026046m Mimulus guttatus mgf026046m I 0.727
GRMZM2G025989 Zea mays GRMZM2G025989 I 0.723
Pavir.Ib04170 Panicum virgatum Pavir.Ib04170 I 0.717
SapurV1A.0085s0450 Salix purpurea SapurV1A.0085s0450 I 0.717
LBD3 Vitis vinifera VIT_19s0027g01120 I 0.717
Si037583m.g Setaria italica Si037583m.g I 0.717
Pavir.Ia01095 Panicum virgatum Pavir.Ia01095 I 0.717
PDK_20s1448121g001 Phoenix dactylifera PDK_20s1448121g001 N 0.712
BGIOSGA013249 Oryza indica BGIOSGA013249 I 0.707
F775_24149 Aegilops tauschii F775_24149 I 0.707
Sb01g012810 Sorghum bicolor Sb01g012810 I 0.707
PGSC0003DMG400008649 Solanum tuberosum PGSC0003DMG400008649 I 0.707
TRIUR3_27421 Triticum urartu TRIUR3_27421 I 0.707
PK11564.1 Cannabis sativa PK11564.1 I 0.707
ONIVA03G29300 Oryza nivara ONIVA03G29300 I 0.707
Solyc11g045530.1 Solanum lycopersicum Solyc11g045530.1 I 0.707
OMERI03G24920 Oryza meridionalis OMERI03G24920 I 0.707
OGLUM04G05130 Oryza glumaepatula OGLUM04G05130 I 0.707
GRMZM2G079185 Zea mays GRMZM2G079185 I 0.707
ORUFI03G29410 Oryza rufipogon ORUFI03G29410 I 0.707
ORUFI01G46340 Oryza rufipogon ORUFI01G46340 I 0.707