Eucgr.D01925 (Eucalyptus grandis)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Eucgr.D01925 T008138_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB1A
M01624_2.00 		Arabidopsis thaliana
NRCCGACNNN
NNNGTCGGYN		 PBM
Weirauch et al.(2014)
pTH8163 		0.790 0.900
DREB1A
M01625_2.00 		Arabidopsis thaliana
NNRCCGACNW
WNGTCGGYNN		 PBM
Weirauch et al.(2014)
pTH9718 		0.790 0.900
DREB1A
M06641_2.00 		Arabidopsis thaliana
HNYBRCCGACDWNN
NNWHGTCGGYVRND		 Dap-seq
OMalley et al.(2016)
CBF3_col_a 		0.790 0.900
DREB1A
M06642_2.00 		Arabidopsis thaliana
YBRCCGACATN
NATGTCGGYVR		 Dap-seq
OMalley et al.(2016)
CBF3_colamp_a 		0.790 0.900
DREB1D
M06678_2.00 		Arabidopsis thaliana
NHBRCCGACRTNN
NNAYGTCGGYVDN		 Dap-seq
OMalley et al.(2016)
CBF4_col_a 		0.779 0.880
DREB1D
M06679_2.00 		Arabidopsis thaliana
HYRCCGACATND
HNATGTCGGYRD		 Dap-seq
OMalley et al.(2016)
CBF4_colamp_a 		0.779 0.880
DREB1C
M01623_2.00 		Arabidopsis thaliana
RCCGACAT
ATGTCGGY		 PBM
Weirauch et al.(2014)
pTH8187 		0.754 0.880
DREB1C
M06639_2.00 		Arabidopsis thaliana
NNNHBRCCGACATNN
NNATGTCGGYVDNNN		 Dap-seq
OMalley et al.(2016)
CBF2_col_a 		0.754 0.880
DREB1C
M06640_2.00 		Arabidopsis thaliana
NYBRCCGACATVN
NBATGTCGGYVRN		 Dap-seq
OMalley et al.(2016)
CBF2_colamp_a 		0.754 0.880
DREB1G
M01635_2.00 		Oryza sativa
NYGCCGACAN
NTGTCGGCRN		 PBM
Weirauch et al.(2014)
pTH8352 		0.735 0.800
DREB1G
M09707_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1G_01 		0.735 0.800
DREB1F
M00962_2.00 		Arabidopsis thaliana
NRCCGACNN
NNGTCGGYN		 PBM
LehtiShiu et al.(2015)
DDF1_Arabidopsis_thaliana 		0.735 0.800
DREB1F
M00840_2.00 		Arabidopsis thaliana
NRYCGACNN
NNGTCGRYN		 PBM
Franco-Zorrilla et al.(2014)
DDF1 		0.735 0.800
DDF1
M00964_2.00 		Arabidopsis lyrata
NRYCGACDY
RHGTCGRYN		 PBM
LehtiShiu et al.(2015)
DDF1_Arabidopsis_lyrata 		0.735 0.800
DREB1F
M06564_2.00 		Arabidopsis thaliana
NHNHYGYCGACATNN
NNATGTCGRCRDNDN		 Dap-seq
OMalley et al.(2016)
DDF1_col_a 		0.735 0.800
DREB1F
M06565_2.00 		Arabidopsis thaliana
HNDNNRYCGACAH
DTGTCGRYNNHND		 Dap-seq
OMalley et al.(2016)
DDF1_colamp_a 		0.735 0.800
DREB1F
M09701_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1F_03 		0.735 0.800
ddf2
M00965_2.00 		Arabidopsis lyrata
NRYCGACAT
ATGTCGRYN		 PBM
LehtiShiu et al.(2015)
DDF2_Arabidopsis_lyrata 		0.706 0.760
DREB1E
M09709_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1E_01 		0.686 0.780
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.D01925.1 AP2 57 108

Links

Other AP2 family TFs
Other Eucalyptus grandis TFs

208 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30147.m014313 Ricinus communis 30147.m014313 I 0.785
30190.m011119 Ricinus communis 30190.m011119 I 0.749
30190.m011120 Ricinus communis 30190.m011120 I 0.794
60638.m00016 Ricinus communis 60638.m00016 I 0.756
AMTR_s00069p00141520 Amborella trichopoda AMTR_s00069p00141520 I 0.705
AMTR_s00095p00096190 Amborella trichopoda AMTR_s00095p00096190 I 0.708
Aquca_012_00144 Aquilegia coerulea Aquca_012_00144 I 0.773
Aquca_013_00434 Aquilegia coerulea Aquca_013_00434 I 0.729
Aquca_013_00435 Aquilegia coerulea Aquca_013_00435 I 0.766
Aquca_013_00436 Aquilegia coerulea Aquca_013_00436 I 0.764
Aquca_122_00012 Aquilegia coerulea Aquca_122_00012 I 0.700
Aquca_122_00013 Aquilegia coerulea Aquca_122_00013 I 0.690
Bo01335s010 Brassica oleracea Bo01335s010 I 0.739
Bo5g016750 Brassica oleracea Bo5g016750 I 0.692
Bo8g108050 Brassica oleracea Bo8g108050 I 0.732
Bo9g104770 Brassica oleracea Bo9g104770 I 0.779
Bostr.13671s0200 Boechera stricta Bostr.13671s0200 I 0.724
Bostr.15774s0346 Boechera stricta Bostr.15774s0346 I 0.779
Bostr.22157s0019 Boechera stricta Bostr.22157s0019 I 0.706
Bostr.7867s0359 Boechera stricta Bostr.7867s0359 I 0.775
Bostr.7867s0360 Boechera stricta Bostr.7867s0360 I 0.801
Bostr.7867s0361 Boechera stricta Bostr.7867s0361 I 0.775
Bra016763 Brassica rapa Bra016763 I 0.739
Bra019777 Brassica rapa Bra019777 I 0.691
Bra026963 Brassica rapa Bra026963 I 0.732
Bra028290 Brassica rapa Bra028290 I 0.779
BRADI3G51630 Brachypodium distachyon BRADI3G51630 I 0.740
Cagra.0094s0011 Capsella grandiflora Cagra.0094s0011 I 0.779
Cagra.0568s0171 Capsella grandiflora Cagra.0568s0171 I 0.727
Cagra.2248s0026 Capsella grandiflora Cagra.2248s0026 I 0.804
Cagra.23885s0001 Capsella grandiflora Cagra.23885s0001 I 0.688
Cagra.28753s0001 Capsella grandiflora Cagra.28753s0001 I 0.775
Carubv10005709m.g Capsella rubella Carubv10005709m.g I 0.775
Carubv10006965m.g Capsella rubella Carubv10006965m.g I 0.752
Carubv10010303m.g Capsella rubella Carubv10010303m.g I 0.727
Carubv10021910m.g Capsella rubella Carubv10021910m.g I 0.688
Carubv10027759m.g Capsella rubella Carubv10027759m.g I 0.779
cassava17064.m1 Manihot esculenta cassava17064.m1 I 0.730
cassava18935.valid.m1 Manihot esculenta cassava18935.valid.m1 I 0.782
cassava35062.m1 Manihot esculenta cassava35062.m1 I 0.811
cassava41192.m1 Manihot esculenta cassava41192.m1 I 0.792
cassava41218.m1 Manihot esculenta cassava41218.m1 I 0.736
Ca_04504 Cicer arietinum Ca_04504 I 0.710
Ca_08732 Cicer arietinum Ca_08732 I 0.727
Ca_18948 Cicer arietinum Ca_18948 I 0.712
CBF2 Arabidopsis lyrata fgenesh2_kg.7__1712__AT4G25470.1 I 0.783
CBF4 Arabidopsis lyrata scaffold_801637.1 I 0.779
chr3.LjT42M03.60.nd Lotus japonicus chr3.LjT42M03.60.nd I 0.705
Ciclev10007068m.g Citrus clementina Ciclev10007068m.g I 0.745
Ciclev10021923m.g Citrus clementina Ciclev10021923m.g I 0.799
Cla002362 Citrullus lanatus Cla002362 I 0.781
Cla006315 Citrullus lanatus Cla006315 I 0.797
Cla011674 Citrullus lanatus Cla011674 I 0.832
Cucsa.166340 Cucumis sativus Cucsa.166340 I 0.759
Cucsa.251030 Cucumis sativus Cucsa.251030 I 0.799
Cucsa.302750 Cucumis sativus Cucsa.302750 I 0.808
DDF1 Arabidopsis lyrata fgenesh2_kg.1__1363__AT1G12610.1 D 0.735
ddf2 Arabidopsis lyrata fgenesh2_kg.2__175__AT1G63030.1 D 0.706
DREB1A Arabidopsis thaliana AT4G25480 D 0.790
DREB1C Arabidopsis thaliana AT4G25470 D 0.754
DREB1D Arabidopsis thaliana AT5G51990 D 0.779
DREB1E Oryza indica BGIOSGA016950 I 0.686
DREB1E Oryza sativa OS04G0572400 D 0.686
DREB1F Arabidopsis thaliana AT1G12610 D 0.735
DREB1G Oryza indica BGIOSGA008804 I 0.735
DREB1G Oryza sativa OS02G0677300 D 0.735
Eucgr.A02818 Eucalyptus grandis Eucgr.A02818 I 0.751
Eucgr.A02820 Eucalyptus grandis Eucgr.A02820 I 0.701
Eucgr.A02821 Eucalyptus grandis Eucgr.A02821 I 0.690
Eucgr.A02822 Eucalyptus grandis Eucgr.A02822 I 0.697
Eucgr.A02824 Eucalyptus grandis Eucgr.A02824 I 0.701
Eucgr.A02826 Eucalyptus grandis Eucgr.A02826 I 0.701
Eucgr.A02827 Eucalyptus grandis Eucgr.A02827 I 0.691
Eucgr.A02830 Eucalyptus grandis Eucgr.A02830 I 0.681
Eucgr.A02831 Eucalyptus grandis Eucgr.A02831 I 0.695
Eucgr.A02832 Eucalyptus grandis Eucgr.A02832 I 0.701
Eucgr.A02834 Eucalyptus grandis Eucgr.A02834 I 0.691
Eucgr.E00529 Eucalyptus grandis Eucgr.E00529 I 0.814
evm.TU.supercontig_5.66 Carica papaya evm.TU.supercontig_5.66 I 0.727
evm.TU.supercontig_74.84 Carica papaya evm.TU.supercontig_74.84 I 0.797
gene13329-v1.0-hybrid Fragaria vesca gene13329-v1.0-hybrid I 0.812
gene32378-v1.0-hybrid Fragaria vesca gene32378-v1.0-hybrid I 0.840
GLYMA01G42500 Glycine max GLYMA01G42500 I 0.707
GLYMA05G03560 Glycine max GLYMA05G03560 I 0.735
GLYMA09G27180 Glycine max GLYMA09G27180 I 0.799
GLYMA10G38440 Glycine max GLYMA10G38440 I 0.751
GLYMA11G19341 Glycine max GLYMA11G19341 I 0.704
GLYMA12G09130 Glycine max GLYMA12G09130 I 0.704
GLYMA12G30740 Glycine max GLYMA12G30740 I 0.755
GLYMA13G39540 Glycine max GLYMA13G39540 I 0.741
GLYMA16G32330 Glycine max GLYMA16G32330 I 0.700
GLYMA17G14111 Glycine max GLYMA17G14111 I 0.746
GLYMA20G29410 Glycine max GLYMA20G29410 I 0.745
Gorai.006G046200 Gossypium raimondii Gorai.006G046200 I 0.759
Gorai.007G010100 Gossypium raimondii Gorai.007G010100 I 0.811
Gorai.008G243600 Gossypium raimondii Gorai.008G243600 I 0.826
Gorai.008G280600 Gossypium raimondii Gorai.008G280600 I 0.683
GRMZM2G137341 Zea mays GRMZM2G137341 I 0.735
GSMUA_Achr11G21630_001 Musa acuminata GSMUA_Achr11G21630_001 I 0.776
GSMUA_Achr7G05900_001 Musa acuminata GSMUA_Achr7G05900_001 I 0.700
GSMUA_Achr8G11980_001 Musa acuminata GSMUA_Achr8G11980_001 I 0.747
LjSGA_037211.1 Lotus japonicus LjSGA_037211.1 I 0.775
LPERR02G22610 Leersia perrieri LPERR02G22610 I 0.735
LPERR04G18190 Leersia perrieri LPERR04G18190 I 0.686
Lus10001871.g Linum usitatissimum Lus10001871.g I 0.743
Lus10006332.g Linum usitatissimum Lus10006332.g I 0.743
Lus10006334.g Linum usitatissimum Lus10006334.g I 0.743
Lus10017829.g Linum usitatissimum Lus10017829.g I 0.744
Lus10027412.g Linum usitatissimum Lus10027412.g I 0.706
Lus10029601.g Linum usitatissimum Lus10029601.g I 0.743
Lus10029602.g Linum usitatissimum Lus10029602.g I 0.743
Lus10031657.g Linum usitatissimum Lus10031657.g I 0.710
MDP0000154764 Malus domestica MDP0000154764 I 0.821
MDP0000198054 Malus domestica MDP0000198054 I 0.819
mgf016974m Mimulus guttatus mgf016974m I 0.709
mgf017136m Mimulus guttatus mgf017136m I 0.770
mgf018631m Mimulus guttatus mgf018631m I 0.709
mgf018934m Mimulus guttatus mgf018934m I 0.709
mgf019061m Mimulus guttatus mgf019061m I 0.754
mgf022408m Mimulus guttatus mgf022408m I 0.709
mgf026339m Mimulus guttatus mgf026339m I 0.738
mgf026642m Mimulus guttatus mgf026642m I 0.819
MLOC_75886 Hordeum vulgare MLOC_75886 I 0.740
MTR_1g101600 Medicago truncatula MTR_1g101600 I 0.731
MTR_2g085015 Medicago truncatula MTR_2g085015 I 0.718
MTR_4g102660 Medicago truncatula MTR_4g102660 I 0.733
MTR_5g010910 Medicago truncatula MTR_5g010910 N 0.703
MTR_5g010930 Medicago truncatula MTR_5g010930 I 0.750
MTR_5g010940 Medicago truncatula MTR_5g010940 N 0.703
MTR_6g465420 Medicago truncatula MTR_6g465420 I 0.727
MTR_6g465430 Medicago truncatula MTR_6g465430 I 0.727
MTR_6g465450 Medicago truncatula MTR_6g465450 I 0.726
MTR_6g465460 Medicago truncatula MTR_6g465460 I 0.735
MTR_6g465510 Medicago truncatula MTR_6g465510 I 0.750
MTR_6g465530 Medicago truncatula MTR_6g465530 I 0.724
MTR_6g465690 Medicago truncatula MTR_6g465690 I 0.746
MTR_6g465850 Medicago truncatula MTR_6g465850 I 0.706
MTR_6g466000 Medicago truncatula MTR_6g466000 I 0.746
MTR_6g466130 Medicago truncatula MTR_6g466130 I 0.774
MTR_8g006410 Medicago truncatula MTR_8g006410 I 0.731
OBART02G27760 Oryza barthii OBART02G27760 I 0.735
OBART04G22220 Oryza barthii OBART04G22220 I 0.686
OGLUM02G28340 Oryza glumaepatula OGLUM02G28340 I 0.735
OGLUM04G22260 Oryza glumaepatula OGLUM04G22260 I 0.686
OMERI02G26980 Oryza meridionalis OMERI02G26980 I 0.735
OMERI04G18770 Oryza meridionalis OMERI04G18770 I 0.686
ONIVA02G30790 Oryza nivara ONIVA02G30790 I 0.735
ONIVA04G20840 Oryza nivara ONIVA04G20840 I 0.686
OPUNC02G25480 Oryza punctata OPUNC02G25480 I 0.735
OPUNC04G19970 Oryza punctata OPUNC04G19970 I 0.686
orange1.1g026103m.g Citrus sinensis orange1.1g026103m.g I 0.756
orange1.1g028094m.g Citrus sinensis orange1.1g028094m.g I 0.745
orange1.1g029015m.g Citrus sinensis orange1.1g029015m.g I 0.786
ORGLA04G0192900 Oryza glaberrima ORGLA04G0192900 I 0.686
ORUFI02G29230 Oryza rufipogon ORUFI02G29230 I 0.735
ORUFI04G23890 Oryza rufipogon ORUFI04G23890 I 0.686
Pavir.Aa00912 Panicum virgatum Pavir.Aa00912 I 0.735
Pavir.Ab02685 Panicum virgatum Pavir.Ab02685 I 0.735
PGSC0003DMG400004255 Solanum tuberosum PGSC0003DMG400004255 I 0.774
PGSC0003DMG400012524 Solanum tuberosum PGSC0003DMG400012524 I 0.763
PGSC0003DMG400012525 Solanum tuberosum PGSC0003DMG400012525 I 0.793
PGSC0003DMG400012526 Solanum tuberosum PGSC0003DMG400012526 I 0.724
PGSC0003DMG400014309 Solanum tuberosum PGSC0003DMG400014309 I 0.763
PGSC0003DMG400014310 Solanum tuberosum PGSC0003DMG400014310 I 0.759
PGSC0003DMG400014311 Solanum tuberosum PGSC0003DMG400014311 I 0.769
PGSC0003DMG400038366 Solanum tuberosum PGSC0003DMG400038366 I 0.711
PK23332.1 Cannabis sativa PK23332.1 I 0.812
Pm019386 Prunus mume Pm019386 I 0.720
Pm023769 Prunus mume Pm023769 I 0.803
Pm023772 Prunus mume Pm023772 I 0.799
Pm023775 Prunus mume Pm023775 I 0.817
Pm023777 Prunus mume Pm023777 N 0.689
POPTR_0001s08710 Populus trichocarpa POPTR_0001s08710 I 0.770
POPTR_0001s08720 Populus trichocarpa POPTR_0001s08720 I 0.752
POPTR_0004s19820 Populus trichocarpa POPTR_0004s19820 I 0.725
POPTR_0009s14990 Populus trichocarpa POPTR_0009s14990 I 0.746
POPTR_0012s13870 Populus trichocarpa POPTR_0012s13870 I 0.811
POPTR_0015s13830 Populus trichocarpa POPTR_0015s13830 I 0.805
PRUPE_ppa010800mg Prunus persica PRUPE_ppa010800mg I 0.817
PRUPE_ppa010909mg Prunus persica PRUPE_ppa010909mg I 0.807
PRUPE_ppa010935mg Prunus persica PRUPE_ppa010935mg I 0.800
PRUPE_ppa014628mg Prunus persica PRUPE_ppa014628mg N 0.732
PRUPE_ppa017761mg Prunus persica PRUPE_ppa017761mg I 0.763
PRUPE_ppa021197mg Prunus persica PRUPE_ppa021197mg I 0.803
SapurV1A.0045s0710 Salix purpurea SapurV1A.0045s0710 I 0.749
SapurV1A.0068s0560 Salix purpurea SapurV1A.0068s0560 I 0.789
SapurV1A.0219s0320 Salix purpurea SapurV1A.0219s0320 I 0.746
SapurV1A.0282s0070 Salix purpurea SapurV1A.0282s0070 I 0.752
SapurV1A.0282s0080 Salix purpurea SapurV1A.0282s0080 I 0.749
SapurV1A.0400s0160 Salix purpurea SapurV1A.0400s0160 I 0.789
Sb04g031950 Sorghum bicolor Sb04g031950 I 0.735
Si018262m.g Setaria italica Si018262m.g I 0.725
Solyc01g009440.1 Solanum lycopersicum Solyc01g009440.1 I 0.700
Solyc03g026270.1 Solanum lycopersicum Solyc03g026270.1 I 0.791
Solyc03g026280.2 Solanum lycopersicum Solyc03g026280.2 I 0.789
Solyc03g124110.1 Solanum lycopersicum Solyc03g124110.1 I 0.786
Solyc08g007820.1 Solanum lycopersicum Solyc08g007820.1 I 0.767
Solyc08g007830.1 Solanum lycopersicum Solyc08g007830.1 I 0.733
Solyc12g056430.1 Solanum lycopersicum Solyc12g056430.1 I 0.687
TCM_016175 Theobroma cacao TCM_016175 I 0.782
Thhalv10009978m.g Eutrema salsugineum Thhalv10009978m.g I 0.737
Thhalv10015252m.g Eutrema salsugineum Thhalv10015252m.g I 0.779
Thhalv10023865m.g Eutrema salsugineum Thhalv10023865m.g I 0.706
Thhalv10027405m.g Eutrema salsugineum Thhalv10027405m.g I 0.801
VIT_02s0025g04460 Vitis vinifera VIT_02s0025g04460 I 0.782
VIT_06s0061g01400 Vitis vinifera VIT_06s0061g01400 I 0.686
VIT_11s0016g02140 Vitis vinifera VIT_11s0016g02140 I 0.729
VIT_16s0100g00380 Vitis vinifera VIT_16s0100g00380 I 0.776