Gorai.009G143000 (Gossypium raimondii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Gorai.009G143000 T287715_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT1G72740
M07033_2.00 		Arabidopsis thaliana
HMNAAACCCTAAWYY
RRWTTAGGGTTTNKD		 Dap-seq
OMalley et al.(2016)
AT1G72740_col_a 		0.901 0.936
AT1G72740
M07034_2.00 		Arabidopsis thaliana
HNWAACCCTAAHYHNNNHNNN
NNNDNNNDRDTTAGGGTTWND		 Dap-seq
OMalley et al.(2016)
AT1G72740_colamp_a 		0.901 0.936
OS01G0708000
M02326_2.00 		Oryza sativa
WRMCCTAVNN
NNBTAGGKYW		 PBM
Weirauch et al.(2014)
pTH8716 		0.812 0.809
TRB1
M01070_2.00 		Arabidopsis thaliana
WRMCCTAR
YTAGGKYW		 PBM
Sullivan et al.(2014)
pTH7117 		0.736 0.745
PK06103.1
M02348_2.00 		Cannabis sativa
TGCCCTAG
CTAGGGCA		 PBM
Weirauch et al.(2014)
pTH9649 		0.673 0.745
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.009G143000.1 Myb 5 57

Links

Other Myb/SANT family TFs
Other Gossypium raimondii TFs

210 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00095p00096190 Amborella trichopoda AMTR_s00095p00096190 I
Aquca_012_00144 Aquilegia coerulea Aquca_012_00144 I
Aquca_013_00434 Aquilegia coerulea Aquca_013_00434 I
Aquca_013_00435 Aquilegia coerulea Aquca_013_00435 I
Aquca_013_00436 Aquilegia coerulea Aquca_013_00436 I
Aquca_122_00012 Aquilegia coerulea Aquca_122_00012 I
Aquca_122_00013 Aquilegia coerulea Aquca_122_00013 I
DDF1 Arabidopsis lyrata fgenesh2_kg.1__1363__AT1G12610.1 D
ddf2 Arabidopsis lyrata fgenesh2_kg.2__175__AT1G63030.1 D
CBF2 Arabidopsis lyrata fgenesh2_kg.7__1712__AT4G25470.1 I
CBF4 Arabidopsis lyrata scaffold_801637.1 I
DREB1F Arabidopsis thaliana AT1G12610 D
DREB1C Arabidopsis thaliana AT4G25470 D
DREB1A Arabidopsis thaliana AT4G25480 D
DREB1B Arabidopsis thaliana AT4G25490 D
DREB1D Arabidopsis thaliana AT5G51990 D
Bostr.13671s0200 Boechera stricta Bostr.13671s0200 I
Bostr.22157s0019 Boechera stricta Bostr.22157s0019 I
Bostr.7867s0359 Boechera stricta Bostr.7867s0359 I
Bostr.7867s0360 Boechera stricta Bostr.7867s0360 I
Bostr.7867s0361 Boechera stricta Bostr.7867s0361 I
BRADI3G51630 Brachypodium distachyon BRADI3G51630 I
Q6T3U0_BRANA Brassica napus Q6T3U0_BRANA D
Q8S2T3_BRANA Brassica napus Q8S2T3_BRANA D
Q8S2T5_BRANA Brassica napus Q8S2T5_BRANA D
Bo01335s010 Brassica oleracea Bo01335s010 I
Bo3g024240 Brassica oleracea Bo3g024240 I
Bo7g110320 Brassica oleracea Bo7g110320 I
Bo8g050800 Brassica oleracea Bo8g050800 I
Bo8g108050 Brassica oleracea Bo8g108050 I
Bo9g104770 Brassica oleracea Bo9g104770 I
Bra010460 Brassica rapa Bra010460 I
Bra016763 Brassica rapa Bra016763 I
Bra019162 Brassica rapa Bra019162 I
Bra022770 Brassica rapa Bra022770 I
Bra026963 Brassica rapa Bra026963 I
Bra028290 Brassica rapa Bra028290 I
PK23332.1 Cannabis sativa PK23332.1 I
Cagra.0094s0011 Capsella grandiflora Cagra.0094s0011 I
Cagra.0568s0171 Capsella grandiflora Cagra.0568s0171 I
Cagra.2248s0025 Capsella grandiflora Cagra.2248s0025 I
Cagra.2248s0026 Capsella grandiflora Cagra.2248s0026 I
Cagra.28753s0001 Capsella grandiflora Cagra.28753s0001 I
Carubv10005709m.g Capsella rubella Carubv10005709m.g I
Carubv10006809m.g Capsella rubella Carubv10006809m.g I
Carubv10006965m.g Capsella rubella Carubv10006965m.g I
Carubv10010303m.g Capsella rubella Carubv10010303m.g I
Carubv10027759m.g Capsella rubella Carubv10027759m.g I
evm.TU.supercontig_5.66 Carica papaya evm.TU.supercontig_5.66 I
evm.TU.supercontig_74.84 Carica papaya evm.TU.supercontig_74.84 I
Ca_04504 Cicer arietinum Ca_04504 I
Ca_08732 Cicer arietinum Ca_08732 I
Ca_18948 Cicer arietinum Ca_18948 I
Cla002362 Citrullus lanatus Cla002362 I
Cla006315 Citrullus lanatus Cla006315 I
Cla011674 Citrullus lanatus Cla011674 I
Ciclev10007068m.g Citrus clementina Ciclev10007068m.g I
Ciclev10021923m.g Citrus clementina Ciclev10021923m.g I
orange1.1g026103m.g Citrus sinensis orange1.1g026103m.g I
orange1.1g028094m.g Citrus sinensis orange1.1g028094m.g I
orange1.1g029015m.g Citrus sinensis orange1.1g029015m.g I
Cucsa.166340 Cucumis sativus Cucsa.166340 I
Cucsa.251030 Cucumis sativus Cucsa.251030 I
Cucsa.302750 Cucumis sativus Cucsa.302750 I
Eucgr.A02818 Eucalyptus grandis Eucgr.A02818 I
Eucgr.A02820 Eucalyptus grandis Eucgr.A02820 I
Eucgr.A02821 Eucalyptus grandis Eucgr.A02821 I
Eucgr.A02822 Eucalyptus grandis Eucgr.A02822 I
Eucgr.A02824 Eucalyptus grandis Eucgr.A02824 I
Eucgr.A02825 Eucalyptus grandis Eucgr.A02825 I
Eucgr.A02826 Eucalyptus grandis Eucgr.A02826 I
Eucgr.A02827 Eucalyptus grandis Eucgr.A02827 I
Eucgr.A02830 Eucalyptus grandis Eucgr.A02830 I
Eucgr.A02831 Eucalyptus grandis Eucgr.A02831 I
Eucgr.A02832 Eucalyptus grandis Eucgr.A02832 I
Eucgr.A02834 Eucalyptus grandis Eucgr.A02834 I
Eucgr.D01925 Eucalyptus grandis Eucgr.D01925 I
Eucgr.E00529 Eucalyptus grandis Eucgr.E00529 I
Thhalv10009978m.g Eutrema salsugineum Thhalv10009978m.g I
Thhalv10015252m.g Eutrema salsugineum Thhalv10015252m.g I
Thhalv10023865m.g Eutrema salsugineum Thhalv10023865m.g I
Thhalv10027405m.g Eutrema salsugineum Thhalv10027405m.g I
gene13329-v1.0-hybrid Fragaria vesca gene13329-v1.0-hybrid I
gene32378-v1.0-hybrid Fragaria vesca gene32378-v1.0-hybrid I
GLYMA01G42500 Glycine max GLYMA01G42500 I
GLYMA09G27180 Glycine max GLYMA09G27180 I
GLYMA10G38440 Glycine max GLYMA10G38440 I
GLYMA11G19341 Glycine max GLYMA11G19341 I
GLYMA12G09130 Glycine max GLYMA12G09130 I
GLYMA12G30710 Glycine max GLYMA12G30710 I
GLYMA12G30740 Glycine max GLYMA12G30740 I
GLYMA13G39540 Glycine max GLYMA13G39540 I
GLYMA20G29410 Glycine max GLYMA20G29410 I
Gorai.003G162700 Gossypium raimondii Gorai.003G162700 I
Gorai.006G046200 Gossypium raimondii Gorai.006G046200 I
Gorai.007G010100 Gossypium raimondii Gorai.007G010100 I
Gorai.008G243600 Gossypium raimondii Gorai.008G243600 I
MLOC_75886 Hordeum vulgare MLOC_75886 I
LPERR02G22610 Leersia perrieri LPERR02G22610 I
LPERR04G18190 Leersia perrieri LPERR04G18190 I
Lus10001871.g Linum usitatissimum Lus10001871.g I
Lus10006332.g Linum usitatissimum Lus10006332.g I
Lus10006334.g Linum usitatissimum Lus10006334.g I
Lus10019455.g Linum usitatissimum Lus10019455.g I
Lus10027412.g Linum usitatissimum Lus10027412.g I
Lus10029601.g Linum usitatissimum Lus10029601.g I
Lus10029602.g Linum usitatissimum Lus10029602.g I
Lus10031657.g Linum usitatissimum Lus10031657.g I
chr2.CM0304.640.nd Lotus japonicus chr2.CM0304.640.nd I
chr3.LjT42M03.60.nd Lotus japonicus chr3.LjT42M03.60.nd I
LjSGA_037211.1 Lotus japonicus LjSGA_037211.1 I
MDP0000154764 Malus domestica MDP0000154764 I
MDP0000198054 Malus domestica MDP0000198054 I
cassava17064.m1 Manihot esculenta cassava17064.m1 I
cassava18935.valid.m1 Manihot esculenta cassava18935.valid.m1 I
cassava35062.m1 Manihot esculenta cassava35062.m1 I
cassava41192.m1 Manihot esculenta cassava41192.m1 I
cassava41218.m1 Manihot esculenta cassava41218.m1 I
MTR_1g101600 Medicago truncatula MTR_1g101600 I
MTR_2g085015 Medicago truncatula MTR_2g085015 I
MTR_5g010930 Medicago truncatula MTR_5g010930 I
MTR_6g465420 Medicago truncatula MTR_6g465420 I
MTR_6g465430 Medicago truncatula MTR_6g465430 I
MTR_6g465450 Medicago truncatula MTR_6g465450 I
MTR_6g465460 Medicago truncatula MTR_6g465460 I
MTR_6g465510 Medicago truncatula MTR_6g465510 I
MTR_6g465530 Medicago truncatula MTR_6g465530 I
MTR_6g465690 Medicago truncatula MTR_6g465690 I
MTR_6g465850 Medicago truncatula MTR_6g465850 I
MTR_6g466000 Medicago truncatula MTR_6g466000 I
MTR_6g466130 Medicago truncatula MTR_6g466130 I
MTR_8g006410 Medicago truncatula MTR_8g006410 I
mgf016974m Mimulus guttatus mgf016974m I
mgf017136m Mimulus guttatus mgf017136m I
mgf018631m Mimulus guttatus mgf018631m I
mgf018934m Mimulus guttatus mgf018934m I
mgf019061m Mimulus guttatus mgf019061m I
mgf022408m Mimulus guttatus mgf022408m I
mgf026339m Mimulus guttatus mgf026339m I
mgf026642m Mimulus guttatus mgf026642m I
GSMUA_Achr10G15510_001 Musa acuminata GSMUA_Achr10G15510_001 I
GSMUA_Achr11G21630_001 Musa acuminata GSMUA_Achr11G21630_001 I
GSMUA_Achr2G20280_001 Musa acuminata GSMUA_Achr2G20280_001 I
GSMUA_Achr4G19660_001 Musa acuminata GSMUA_Achr4G19660_001 I
GSMUA_Achr7G05900_001 Musa acuminata GSMUA_Achr7G05900_001 I
GSMUA_Achr8G11980_001 Musa acuminata GSMUA_Achr8G11980_001 I
OBART02G27760 Oryza barthii OBART02G27760 I
OBART04G22220 Oryza barthii OBART04G22220 I
ORGLA04G0192900 Oryza glaberrima ORGLA04G0192900 I
OGLUM02G28340 Oryza glumaepatula OGLUM02G28340 I
OGLUM04G22260 Oryza glumaepatula OGLUM04G22260 I
DREB1G Oryza indica BGIOSGA008804 I
DREB1E Oryza indica BGIOSGA016950 I
OMERI02G26980 Oryza meridionalis OMERI02G26980 I
OMERI04G18770 Oryza meridionalis OMERI04G18770 I
ONIVA02G30790 Oryza nivara ONIVA02G30790 I
ONIVA04G20840 Oryza nivara ONIVA04G20840 I
OPUNC02G25480 Oryza punctata OPUNC02G25480 I
OPUNC04G19970 Oryza punctata OPUNC04G19970 I
ORUFI02G29230 Oryza rufipogon ORUFI02G29230 I
ORUFI04G23890 Oryza rufipogon ORUFI04G23890 I
DREB1G Oryza sativa OS02G0677300 D
DREB1E Oryza sativa OS04G0572400 D
Pavir.Aa00912 Panicum virgatum Pavir.Aa00912 I
Pavir.Ab02685 Panicum virgatum Pavir.Ab02685 I
Pavir.Ga00931 Panicum virgatum Pavir.Ga00931 I
POPTR_0001s08710 Populus trichocarpa POPTR_0001s08710 I
POPTR_0001s08720 Populus trichocarpa POPTR_0001s08720 I
POPTR_0004s19820 Populus trichocarpa POPTR_0004s19820 I
POPTR_0009s14990 Populus trichocarpa POPTR_0009s14990 I
POPTR_0012s13870 Populus trichocarpa POPTR_0012s13870 I
POPTR_0015s13830 Populus trichocarpa POPTR_0015s13830 I
Pm019386 Prunus mume Pm019386 I
Pm023769 Prunus mume Pm023769 I
Pm023772 Prunus mume Pm023772 I
Pm023775 Prunus mume Pm023775 I
PRUPE_ppa010800mg Prunus persica PRUPE_ppa010800mg I
PRUPE_ppa010909mg Prunus persica PRUPE_ppa010909mg I
PRUPE_ppa010935mg Prunus persica PRUPE_ppa010935mg I
PRUPE_ppa017761mg Prunus persica PRUPE_ppa017761mg I
PRUPE_ppa021197mg Prunus persica PRUPE_ppa021197mg I
30147.m014313 Ricinus communis 30147.m014313 I
30190.m011119 Ricinus communis 30190.m011119 I
30190.m011120 Ricinus communis 30190.m011120 I
60638.m00016 Ricinus communis 60638.m00016 I
SapurV1A.0045s0710 Salix purpurea SapurV1A.0045s0710 I
SapurV1A.0068s0560 Salix purpurea SapurV1A.0068s0560 I
SapurV1A.0219s0320 Salix purpurea SapurV1A.0219s0320 I
SapurV1A.0282s0070 Salix purpurea SapurV1A.0282s0070 I
SapurV1A.0282s0080 Salix purpurea SapurV1A.0282s0080 I
SapurV1A.0400s0160 Salix purpurea SapurV1A.0400s0160 I
Si011005m.g Setaria italica Si011005m.g I
Si018262m.g Setaria italica Si018262m.g I
Solyc01g009440.1 Solanum lycopersicum Solyc01g009440.1 I
Solyc03g026270.1 Solanum lycopersicum Solyc03g026270.1 I
Solyc03g026280.2 Solanum lycopersicum Solyc03g026280.2 I
Solyc03g124110.1 Solanum lycopersicum Solyc03g124110.1 I
Solyc08g007820.1 Solanum lycopersicum Solyc08g007820.1 I
PGSC0003DMG400004255 Solanum tuberosum PGSC0003DMG400004255 I
PGSC0003DMG400012524 Solanum tuberosum PGSC0003DMG400012524 I
PGSC0003DMG400012525 Solanum tuberosum PGSC0003DMG400012525 I
PGSC0003DMG400014309 Solanum tuberosum PGSC0003DMG400014309 I
PGSC0003DMG400014310 Solanum tuberosum PGSC0003DMG400014310 I
PGSC0003DMG400014311 Solanum tuberosum PGSC0003DMG400014311 I
PGSC0003DMG400038366 Solanum tuberosum PGSC0003DMG400038366 I
Sb04g031950 Sorghum bicolor Sb04g031950 I
Sb06g025900 Sorghum bicolor Sb06g025900 I
TCM_016175 Theobroma cacao TCM_016175 I
VIT_02s0025g04460 Vitis vinifera VIT_02s0025g04460 I
VIT_06s0061g01390 Vitis vinifera VIT_06s0061g01390 I
VIT_06s0061g01400 Vitis vinifera VIT_06s0061g01400 I
VIT_08s0007g03790 Vitis vinifera VIT_08s0007g03790 I
VIT_11s0016g02140 Vitis vinifera VIT_11s0016g02140 I
VIT_16s0100g00380 Vitis vinifera VIT_16s0100g00380 I
GRMZM2G042756 Zea mays GRMZM2G042756 I
GRMZM2G137341 Zea mays GRMZM2G137341 I