VIT_01s0010g01500 (Vitis vinifera)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 VIT_01s0010g01500 T256766_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_01s0010g01500.t01 MADS box 17 64

Links

Other MADS box family TFs
Other Vitis vinifera TFs

250 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGL62 Arabidopsis thaliana AT5G60440 I 0.854
scaffold_302326.1 Arabidopsis lyrata scaffold_302326.1 I 0.833
gene01788-v1.0-hybrid Fragaria vesca gene01788-v1.0-hybrid I 0.812
MDP0000434703 Malus domestica MDP0000434703 I 0.875
Al_scaffold_0001_74 Arabidopsis lyrata Al_scaffold_0001_74 N 0.854
Al_scaffold_0002_1221 Arabidopsis lyrata Al_scaffold_0002_1221 N 0.833
AGL61 Arabidopsis lyrata Al_scaffold_0004_541 N 0.771
AGL28 Arabidopsis thaliana AT1G01530 N 0.812
AGL23 Arabidopsis thaliana AT1G65360 N 0.750
AGL61 Arabidopsis thaliana AT2G24840 N 0.771
AT4G36590 Arabidopsis thaliana AT4G36590 N 0.792
Bo1g112460 Brassica oleracea Bo1g112460 N 0.812
Bo2g024870 Brassica oleracea Bo2g024870 N 0.708
Bo2g024910 Brassica oleracea Bo2g024910 N 0.750
Bo4g070340 Brassica oleracea Bo4g070340 N 0.723
Bo4g157220 Brassica oleracea Bo4g157220 N 0.708
Bo4g165540 Brassica oleracea Bo4g165540 N 0.750
Bo5g113750 Brassica oleracea Bo5g113750 N 0.812
Bo8g099550 Brassica oleracea Bo8g099550 N 0.729
Bo9g142570 Brassica oleracea Bo9g142570 N 0.833
Bra002480 Brassica rapa Bra002480 N 0.854
Bra007829 Brassica rapa Bra007829 N 0.729
Bra011938 Brassica rapa Bra011938 N 0.729
Bra020247 Brassica rapa Bra020247 N 0.771
Bra022434 Brassica rapa Bra022434 N 0.792
Bra026764 Brassica rapa Bra026764 N 0.750
Bra032057 Brassica rapa Bra032057 N 0.708
Bra035685 Brassica rapa Bra035685 N 0.708
Bra038225 Brassica rapa Bra038225 N 0.792
AGL62 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002041 N 0.854
fgenesh1_pm.C_scaffold_7000337 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7000337 N 0.792
GLYMA10G10840 Glycine max GLYMA10G10840 N 0.708
GLYMA10G10860 Glycine max GLYMA10G10860 N 0.708
GLYMA10G10930 Glycine max GLYMA10G10930 N 0.708
GLYMA10G40060 Glycine max GLYMA10G40060 N 0.729
GLYMA10G40070 Glycine max GLYMA10G40070 N 0.771
GLYMA10G40080 Glycine max GLYMA10G40080 N 0.771
GLYMA13G39016 Glycine max GLYMA13G39016 N 0.833
GLYMA20G27320 Glycine max GLYMA20G27320 N 0.833
GLYMA20G27330 Glycine max GLYMA20G27330 N 0.812
GLYMA20G27341 Glycine max GLYMA20G27341 N 0.812
GLYMA20G27350 Glycine max GLYMA20G27350 N 0.750
MTR_0121s0100 Medicago truncatula MTR_0121s0100 N 0.708
MTR_1g012570 Medicago truncatula MTR_1g012570 N 0.812
MTR_1g075600 Medicago truncatula MTR_1g075600 N 0.812
MTR_1g077360 Medicago truncatula MTR_1g077360 N 0.812
MTR_1g105905 Medicago truncatula MTR_1g105905 N 0.771
MTR_1g105910 Medicago truncatula MTR_1g105910 N 0.812
MTR_1g105920 Medicago truncatula MTR_1g105920 N 0.812
MTR_1g108510 Medicago truncatula MTR_1g108510 N 0.792
MTR_1g108580 Medicago truncatula MTR_1g108580 N 0.708
MTR_2g030740 Medicago truncatula MTR_2g030740 N 0.771
MTR_2g085250 Medicago truncatula MTR_2g085250 N 0.792
MTR_2g085280 Medicago truncatula MTR_2g085280 N 0.792
MTR_2g093190 Medicago truncatula MTR_2g093190 N 0.750
MTR_3g030770 Medicago truncatula MTR_3g030770 N 0.792
MTR_3g052870 Medicago truncatula MTR_3g052870 N 0.812
MTR_3g052920 Medicago truncatula MTR_3g052920 N 0.812
MTR_3g067875 Medicago truncatula MTR_3g067875 N 0.729
MTR_3g080940 Medicago truncatula MTR_3g080940 N 0.750
MTR_5g045560 Medicago truncatula MTR_5g045560 N 0.812
MTR_5g053390 Medicago truncatula MTR_5g053390 N 0.750
MTR_5g055100 Medicago truncatula MTR_5g055100 N 0.771
MTR_8g043650 Medicago truncatula MTR_8g043650 N 0.812
PGSC0003DMG400005131 Solanum tuberosum PGSC0003DMG400005131 N 0.833
PGSC0003DMG400035221 Solanum tuberosum PGSC0003DMG400035221 N 0.708
PGSC0003DMG400041035 Solanum tuberosum PGSC0003DMG400041035 N 0.708
PGSC0003DMG400043633 Solanum tuberosum PGSC0003DMG400043633 N 0.750
PGSC0003DMG400044387 Solanum tuberosum PGSC0003DMG400044387 N 0.750
PGSC0003DMG400045239 Solanum tuberosum PGSC0003DMG400045239 N 0.708
POPTR_0007s03430 Populus trichocarpa POPTR_0007s03430 N 0.875
POPTR_0008s04110 Populus trichocarpa POPTR_0008s04110 N 0.750
POPTR_0009s08750 Populus trichocarpa POPTR_0009s08750 N 0.896
POPTR_0016s12640 Populus trichocarpa POPTR_0016s12640 N 0.708
POPTR_0017s06710 Populus trichocarpa POPTR_0017s06710 N 0.729
POPTR_0017s06800 Populus trichocarpa POPTR_0017s06800 N 0.729
POPTR_0017s06810 Populus trichocarpa POPTR_0017s06810 N 0.708
POPTR_0017s07460 Populus trichocarpa POPTR_0017s07460 N 0.833
PRUPE_ppa017246mg Prunus persica PRUPE_ppa017246mg N 0.792
PRUPE_ppa022494mg Prunus persica PRUPE_ppa022494mg N 0.771
PRUPE_ppa023670mg Prunus persica PRUPE_ppa023670mg N 0.750
PRUPE_ppa026089mg Prunus persica PRUPE_ppa026089mg N 0.833
PRUPE_ppa026127mg Prunus persica PRUPE_ppa026127mg N 0.896
scaffold_400572.1 Arabidopsis lyrata scaffold_400572.1 N 0.750
Solyc01g060300.1 Solanum lycopersicum Solyc01g060300.1 N 0.702
Solyc01g060310.1 Solanum lycopersicum Solyc01g060310.1 N 0.708
Solyc01g106710.1 Solanum lycopersicum Solyc01g106710.1 N 0.750
Solyc01g106720.1 Solanum lycopersicum Solyc01g106720.1 N 0.833
Solyc01g106730.1 Solanum lycopersicum Solyc01g106730.1 N 0.812
TCM_006323 Theobroma cacao TCM_006323 N 0.833
TCM_006324 Theobroma cacao TCM_006324 N 0.771
TCM_040735 Theobroma cacao TCM_040735 N 0.771
VIT_01s0010g01530 Vitis vinifera VIT_01s0010g01530 N 0.854
VIT_03s0088g00510 Vitis vinifera VIT_03s0088g00510 N 0.917
VIT_03s0088g00550 Vitis vinifera VIT_03s0088g00550 N 0.896
VIT_03s0088g00590 Vitis vinifera VIT_03s0088g00590 N 0.771
VIT_03s0088g00600 Vitis vinifera VIT_03s0088g00600 N 0.938
VIT_03s0088g00610 Vitis vinifera VIT_03s0088g00610 N 0.750
Ca_04659 Cicer arietinum Ca_04659 N 0.833
Ca_04660 Cicer arietinum Ca_04660 N 0.833
Ca_04661 Cicer arietinum Ca_04661 N 0.792
Ca_04662 Cicer arietinum Ca_04662 N 0.771
Ca_04665 Cicer arietinum Ca_04665 N 0.833
Ca_07607 Cicer arietinum Ca_07607 N 0.750
Ca_26354 Cicer arietinum Ca_26354 N 0.750
Cla006571 Citrullus lanatus Cla006571 N 0.896
Cla010744 Citrullus lanatus Cla010744 N 0.729
Pm016629 Prunus mume Pm016629 N 0.750
Pm021017 Prunus mume Pm021017 N 0.771
Pm021018 Prunus mume Pm021018 N 0.833
Pm021070 Prunus mume Pm021070 N 0.792
Pm021071 Prunus mume Pm021071 N 0.896
27866.m000233 Ricinus communis 27866.m000233 N 0.708
29613.m000367 Ricinus communis 29613.m000367 N 0.750
29838.m001672 Ricinus communis 29838.m001672 N 0.771
30099.m001671 Ricinus communis 30099.m001671 N 0.708
30099.m001672 Ricinus communis 30099.m001672 N 0.917
cassava21387.m1 Manihot esculenta cassava21387.m1 N 0.792
cassava21573.m1 Manihot esculenta cassava21573.m1 N 0.771
cassava33542.m1 Manihot esculenta cassava33542.m1 N 0.875
cassava41915.m1 Manihot esculenta cassava41915.m1 N 0.708
cassava8711.m1 Manihot esculenta cassava8711.m1 N 0.792
Cucsa.298560 Cucumis sativus Cucsa.298560 N 0.896
Cucsa.342610 Cucumis sativus Cucsa.342610 N 0.708
mgf018529m Mimulus guttatus mgf018529m N 0.750
mgf020533m Mimulus guttatus mgf020533m N 0.708
mgf022147m Mimulus guttatus mgf022147m N 0.750
mgf022403m Mimulus guttatus mgf022403m N 0.708
mgf022790m Mimulus guttatus mgf022790m N 0.729
mgf024307m Mimulus guttatus mgf024307m N 0.750
mgf024490m Mimulus guttatus mgf024490m N 0.708
mgf025566m Mimulus guttatus mgf025566m N 0.708
Aquca_041_00050 Aquilegia coerulea Aquca_041_00050 N 0.708
Bostr.26833s0197 Boechera stricta Bostr.26833s0197 N 0.875
Bostr.5325s0071 Boechera stricta Bostr.5325s0071 N 0.792
Bostr.7867s1515 Boechera stricta Bostr.7867s1515 N 0.812
Bostr.8705s0016 Boechera stricta Bostr.8705s0016 N 0.792
Cagra.1004s0007 Capsella grandiflora Cagra.1004s0007 N 0.771
Cagra.1695s0023 Capsella grandiflora Cagra.1695s0023 N 0.771
Cagra.1968s0094 Capsella grandiflora Cagra.1968s0094 N 0.750
Cagra.2519s0016 Capsella grandiflora Cagra.2519s0016 N 0.875
Carubv10007644m.g Capsella rubella Carubv10007644m.g N 0.771
Carubv10010156m.g Capsella rubella Carubv10010156m.g N 0.750
Carubv10024914m.g Capsella rubella Carubv10024914m.g N 0.771
Carubv10028580m.g Capsella rubella Carubv10028580m.g N 0.875
Ciclev10013802m.g Citrus clementina Ciclev10013802m.g N 0.708
Ciclev10030142m.g Citrus clementina Ciclev10030142m.g N 0.854
Ciclev10030387m.g Citrus clementina Ciclev10030387m.g N 0.708
Eucgr.H04834 Eucalyptus grandis Eucgr.H04834 N 0.729
Eucgr.I02506 Eucalyptus grandis Eucgr.I02506 N 0.833
evm.TU.contig_24748.4 Carica papaya evm.TU.contig_24748.4 N 0.854
evm.TU.contig_24748.5 Carica papaya evm.TU.contig_24748.5 N 0.750
evm.TU.contig_26687.3 Carica papaya evm.TU.contig_26687.3 N 0.854
evm.TU.contig_27313 Carica papaya evm.TU.contig_27313 N 0.812
evm.TU.contig_27553.3 Carica papaya evm.TU.contig_27553.3 N 0.750
evm.TU.contig_27553.5 Carica papaya evm.TU.contig_27553.5 N 0.708
evm.TU.contig_28241.1 Carica papaya evm.TU.contig_28241.1 N 0.854
evm.TU.contig_30005.4 Carica papaya evm.TU.contig_30005.4 N 0.833
evm.TU.contig_30114.1 Carica papaya evm.TU.contig_30114.1 N 0.854
evm.TU.contig_30689 Carica papaya evm.TU.contig_30689 N 0.833
evm.TU.contig_30908.1 Carica papaya evm.TU.contig_30908.1 N 0.854
evm.TU.contig_33038 Carica papaya evm.TU.contig_33038 N 0.854
evm.TU.contig_33091.3 Carica papaya evm.TU.contig_33091.3 N 0.729
evm.TU.contig_35157.1 Carica papaya evm.TU.contig_35157.1 N 0.812
evm.TU.contig_35157.2 Carica papaya evm.TU.contig_35157.2 N 0.729
evm.TU.contig_35713 Carica papaya evm.TU.contig_35713 N 0.875
evm.TU.contig_35751 Carica papaya evm.TU.contig_35751 N 0.875
evm.TU.contig_37082 Carica papaya evm.TU.contig_37082 N 0.750
evm.TU.contig_37271 Carica papaya evm.TU.contig_37271 N 0.875
evm.TU.contig_38155.1 Carica papaya evm.TU.contig_38155.1 N 0.708
evm.TU.contig_38604 Carica papaya evm.TU.contig_38604 N 0.771
evm.TU.contig_41453 Carica papaya evm.TU.contig_41453 N 0.708
evm.TU.contig_41623 Carica papaya evm.TU.contig_41623 N 0.792
evm.TU.contig_43014 Carica papaya evm.TU.contig_43014 N 0.729
evm.TU.contig_47064.2 Carica papaya evm.TU.contig_47064.2 N 0.708
evm.TU.supercontig_106.18 Carica papaya evm.TU.supercontig_106.18 N 0.833
evm.TU.supercontig_106.19 Carica papaya evm.TU.supercontig_106.19 N 0.792
evm.TU.supercontig_106.20 Carica papaya evm.TU.supercontig_106.20 N 0.771
evm.TU.supercontig_1259.1 Carica papaya evm.TU.supercontig_1259.1 N 0.812
evm.TU.supercontig_1455.2 Carica papaya evm.TU.supercontig_1455.2 N 0.854
evm.TU.supercontig_20.86 Carica papaya evm.TU.supercontig_20.86 N 0.750
evm.TU.supercontig_347.10 Carica papaya evm.TU.supercontig_347.10 N 0.750
evm.TU.supercontig_347.11 Carica papaya evm.TU.supercontig_347.11 N 0.854
evm.TU.supercontig_347.2 Carica papaya evm.TU.supercontig_347.2 N 0.750
evm.TU.supercontig_347.7 Carica papaya evm.TU.supercontig_347.7 N 0.875
evm.TU.supercontig_347.8 Carica papaya evm.TU.supercontig_347.8 N 0.833
evm.TU.supercontig_348.3 Carica papaya evm.TU.supercontig_348.3 N 0.812
evm.TU.supercontig_348.4 Carica papaya evm.TU.supercontig_348.4 N 0.854
evm.TU.supercontig_348.8 Carica papaya evm.TU.supercontig_348.8 N 0.854
evm.TU.supercontig_348.9 Carica papaya evm.TU.supercontig_348.9 N 0.729
evm.TU.supercontig_439.1 Carica papaya evm.TU.supercontig_439.1 N 0.771
evm.TU.supercontig_439.7 Carica papaya evm.TU.supercontig_439.7 N 0.833
evm.TU.supercontig_505.2 Carica papaya evm.TU.supercontig_505.2 N 0.854
evm.TU.supercontig_505.4 Carica papaya evm.TU.supercontig_505.4 N 0.854
evm.TU.supercontig_505.5 Carica papaya evm.TU.supercontig_505.5 N 0.750
evm.TU.supercontig_505.6 Carica papaya evm.TU.supercontig_505.6 N 0.812
evm.TU.supercontig_54.67 Carica papaya evm.TU.supercontig_54.67 N 0.771
evm.TU.supercontig_54.68 Carica papaya evm.TU.supercontig_54.68 N 0.833
evm.TU.supercontig_625.2 Carica papaya evm.TU.supercontig_625.2 N 0.708
evm.TU.supercontig_625.4 Carica papaya evm.TU.supercontig_625.4 N 0.875
evm.TU.supercontig_654.4 Carica papaya evm.TU.supercontig_654.4 N 0.854
evm.TU.supercontig_654.5 Carica papaya evm.TU.supercontig_654.5 N 0.750
evm.TU.supercontig_654.6 Carica papaya evm.TU.supercontig_654.6 N 0.875
evm.TU.supercontig_695.1 Carica papaya evm.TU.supercontig_695.1 N 0.854
evm.TU.supercontig_695.5 Carica papaya evm.TU.supercontig_695.5 N 0.833
evm.TU.supercontig_695.7 Carica papaya evm.TU.supercontig_695.7 N 0.854
evm.TU.supercontig_695.8 Carica papaya evm.TU.supercontig_695.8 N 0.708
evm.TU.supercontig_758.1 Carica papaya evm.TU.supercontig_758.1 N 0.771
evm.TU.supercontig_758.2 Carica papaya evm.TU.supercontig_758.2 N 0.854
evm.TU.supercontig_758.4 Carica papaya evm.TU.supercontig_758.4 N 0.854
evm.TU.supercontig_851.1 Carica papaya evm.TU.supercontig_851.1 N 0.792
gene01789-v1.0-hybrid Fragaria vesca gene01789-v1.0-hybrid N 0.875
Gorai.002G213500 Gossypium raimondii Gorai.002G213500 N 0.833
Gorai.005G263100 Gossypium raimondii Gorai.005G263100 N 0.812
Gorai.006G127800 Gossypium raimondii Gorai.006G127800 N 0.771
Lus10012449.g Linum usitatissimum Lus10012449.g N 0.792
Lus10020511.g Linum usitatissimum Lus10020511.g N 0.812
Lus10030663.g Linum usitatissimum Lus10030663.g N 0.729
Lus10030824.g Linum usitatissimum Lus10030824.g N 0.750
Lus10031073.g Linum usitatissimum Lus10031073.g N 0.729
Lus10035456.g Linum usitatissimum Lus10035456.g N 0.708
MDP0000168914 Malus domestica MDP0000168914 N 0.771
MDP0000221590 Malus domestica MDP0000221590 N 0.771
MDP0000233925 Malus domestica MDP0000233925 N 0.854
MDP0000278770 Malus domestica MDP0000278770 N 0.854
orange1.1g036705m.g Citrus sinensis orange1.1g036705m.g N 0.708
orange1.1g039654m.g Citrus sinensis orange1.1g039654m.g N 0.854
orange1.1g045481m.g Citrus sinensis orange1.1g045481m.g N 0.708
SapurV1A.0019s0690 Salix purpurea SapurV1A.0019s0690 N 0.917
SapurV1A.0019s0700 Salix purpurea SapurV1A.0019s0700 N 0.708
SapurV1A.0808s0160 Salix purpurea SapurV1A.0808s0160 N 0.812
SapurV1A.1313s0050 Salix purpurea SapurV1A.1313s0050 N 0.833
Thhalv10000479m.g Eutrema salsugineum Thhalv10000479m.g N 0.792
Thhalv10003315m.g Eutrema salsugineum Thhalv10003315m.g N 0.708
Thhalv10003338m.g Eutrema salsugineum Thhalv10003338m.g N 0.792
Thhalv10003426m.g Eutrema salsugineum Thhalv10003426m.g N 0.833
Thhalv10015908m.g Eutrema salsugineum Thhalv10015908m.g N 0.833
Thhalv10017754m.g Eutrema salsugineum Thhalv10017754m.g N 0.729
Thhalv10022102m.g Eutrema salsugineum Thhalv10022102m.g N 0.833
Thhalv10027307m.g Eutrema salsugineum Thhalv10027307m.g N 0.792
chr1.CM0088.830.nc Lotus japonicus chr1.CM0088.830.nc N 0.792
chr2.CM0904.120.nd Lotus japonicus chr2.CM0904.120.nd N 0.771
chr3.CM0279.290.nc Lotus japonicus chr3.CM0279.290.nc N 0.792
chr5.LjT25B19.190.nd Lotus japonicus chr5.LjT25B19.190.nd N 0.708
chr5.LjT39E05.40.nd Lotus japonicus chr5.LjT39E05.40.nd N 0.750
LjSGA_025167.1 Lotus japonicus LjSGA_025167.1 N 0.729
LjSGA_042140.1 Lotus japonicus LjSGA_042140.1 N 0.729
LjSGA_067087.1 Lotus japonicus LjSGA_067087.1 N 0.708
LjSGA_079719.1 Lotus japonicus LjSGA_079719.1 N 0.750
LjT01D09.100.nd Lotus japonicus LjT01D09.100.nd N 0.708