VIT_03s0088g00550 (Vitis vinifera)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 VIT_03s0088g00550 T256778_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_03s0088g00550.t01 MADS box 17 64

Links

Other MADS box family TFs
Other Vitis vinifera TFs

239 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29613.m000367 Ricinus communis 29613.m000367 N 0.792
29838.m001672 Ricinus communis 29838.m001672 N 0.729
30099.m001671 Ricinus communis 30099.m001671 N 0.771
30099.m001672 Ricinus communis 30099.m001672 N 0.875
Al_scaffold_0001_74 Arabidopsis lyrata Al_scaffold_0001_74 N 0.875
Al_scaffold_0002_1221 Arabidopsis lyrata Al_scaffold_0002_1221 N 0.812
AGL61 Arabidopsis lyrata Al_scaffold_0004_541 N 0.771
Aquca_041_00050 Aquilegia coerulea Aquca_041_00050 N 0.708
Aquca_054_00126 Aquilegia coerulea Aquca_054_00126 N 0.708
AGL28 Arabidopsis thaliana AT1G01530 N 0.833
AGL23 Arabidopsis thaliana AT1G65360 N 0.771
AGL61 Arabidopsis thaliana AT2G24840 N 0.771
AT4G36590 Arabidopsis thaliana AT4G36590 N 0.792
AGL62 Arabidopsis thaliana AT5G60440 I 0.875
Bo1g112460 Brassica oleracea Bo1g112460 N 0.812
Bo2g024910 Brassica oleracea Bo2g024910 N 0.771
Bo4g070340 Brassica oleracea Bo4g070340 N 0.745
Bo4g165540 Brassica oleracea Bo4g165540 N 0.812
Bo5g113750 Brassica oleracea Bo5g113750 N 0.812
Bo8g099550 Brassica oleracea Bo8g099550 N 0.729
Bo9g142570 Brassica oleracea Bo9g142570 N 0.854
Bostr.22252s0371 Boechera stricta Bostr.22252s0371 I 0.708
Bostr.26833s0197 Boechera stricta Bostr.26833s0197 N 0.875
Bostr.5325s0071 Boechera stricta Bostr.5325s0071 N 0.812
Bostr.7867s1515 Boechera stricta Bostr.7867s1515 N 0.812
Bostr.8705s0016 Boechera stricta Bostr.8705s0016 N 0.792
Bra002480 Brassica rapa Bra002480 N 0.875
Bra007829 Brassica rapa Bra007829 N 0.729
Bra011938 Brassica rapa Bra011938 N 0.750
Bra020247 Brassica rapa Bra020247 N 0.771
Bra022434 Brassica rapa Bra022434 N 0.833
Bra026764 Brassica rapa Bra026764 N 0.771
Bra032057 Brassica rapa Bra032057 N 0.708
Bra035685 Brassica rapa Bra035685 N 0.771
Bra038225 Brassica rapa Bra038225 N 0.792
Cagra.1004s0007 Capsella grandiflora Cagra.1004s0007 N 0.771
Cagra.1695s0023 Capsella grandiflora Cagra.1695s0023 N 0.771
Cagra.1968s0094 Capsella grandiflora Cagra.1968s0094 N 0.792
Cagra.2519s0016 Capsella grandiflora Cagra.2519s0016 N 0.875
Carubv10007644m.g Capsella rubella Carubv10007644m.g N 0.771
Carubv10010156m.g Capsella rubella Carubv10010156m.g N 0.792
Carubv10024914m.g Capsella rubella Carubv10024914m.g N 0.771
Carubv10028580m.g Capsella rubella Carubv10028580m.g N 0.875
cassava21387.m1 Manihot esculenta cassava21387.m1 N 0.792
cassava21573.m1 Manihot esculenta cassava21573.m1 N 0.729
cassava33542.m1 Manihot esculenta cassava33542.m1 N 0.896
cassava41915.m1 Manihot esculenta cassava41915.m1 N 0.750
cassava8711.m1 Manihot esculenta cassava8711.m1 N 0.771
Ca_04659 Cicer arietinum Ca_04659 N 0.812
Ca_04660 Cicer arietinum Ca_04660 N 0.812
Ca_04661 Cicer arietinum Ca_04661 N 0.771
Ca_04662 Cicer arietinum Ca_04662 N 0.792
Ca_04665 Cicer arietinum Ca_04665 N 0.854
Ca_07607 Cicer arietinum Ca_07607 N 0.833
Ca_24185 Cicer arietinum Ca_24185 I 0.729
Ca_26354 Cicer arietinum Ca_26354 N 0.833
chr1.CM0088.830.nc Lotus japonicus chr1.CM0088.830.nc N 0.812
chr2.CM0250.170.nc Lotus japonicus chr2.CM0250.170.nc N 0.708
chr2.CM0904.120.nd Lotus japonicus chr2.CM0904.120.nd N 0.875
chr3.CM0279.290.nc Lotus japonicus chr3.CM0279.290.nc N 0.833
chr4.LjT16L01.50.nd Lotus japonicus chr4.LjT16L01.50.nd I 0.708
chr5.LjT25B19.190.nd Lotus japonicus chr5.LjT25B19.190.nd N 0.729
chr5.LjT39E05.40.nd Lotus japonicus chr5.LjT39E05.40.nd N 0.750
Ciclev10013802m.g Citrus clementina Ciclev10013802m.g N 0.708
Ciclev10030142m.g Citrus clementina Ciclev10030142m.g N 0.854
Cla006571 Citrullus lanatus Cla006571 N 0.896
Cucsa.298560 Cucumis sativus Cucsa.298560 N 0.896
Eucgr.G01185 Eucalyptus grandis Eucgr.G01185 N 0.708
Eucgr.H04834 Eucalyptus grandis Eucgr.H04834 N 0.771
Eucgr.I02506 Eucalyptus grandis Eucgr.I02506 N 0.771
evm.TU.contig_24748.4 Carica papaya evm.TU.contig_24748.4 N 0.812
evm.TU.contig_24748.5 Carica papaya evm.TU.contig_24748.5 N 0.750
evm.TU.contig_26687.3 Carica papaya evm.TU.contig_26687.3 N 0.812
evm.TU.contig_27313 Carica papaya evm.TU.contig_27313 N 0.771
evm.TU.contig_27553.3 Carica papaya evm.TU.contig_27553.3 N 0.750
evm.TU.contig_28241.1 Carica papaya evm.TU.contig_28241.1 N 0.812
evm.TU.contig_30005.4 Carica papaya evm.TU.contig_30005.4 N 0.792
evm.TU.contig_30114.1 Carica papaya evm.TU.contig_30114.1 N 0.812
evm.TU.contig_30689 Carica papaya evm.TU.contig_30689 N 0.792
evm.TU.contig_30908.1 Carica papaya evm.TU.contig_30908.1 N 0.812
evm.TU.contig_33038 Carica papaya evm.TU.contig_33038 N 0.812
evm.TU.contig_33091.3 Carica papaya evm.TU.contig_33091.3 N 0.729
evm.TU.contig_35157.1 Carica papaya evm.TU.contig_35157.1 N 0.771
evm.TU.contig_35157.2 Carica papaya evm.TU.contig_35157.2 N 0.729
evm.TU.contig_35713 Carica papaya evm.TU.contig_35713 N 0.833
evm.TU.contig_35751 Carica papaya evm.TU.contig_35751 N 0.833
evm.TU.contig_37082 Carica papaya evm.TU.contig_37082 N 0.750
evm.TU.contig_37271 Carica papaya evm.TU.contig_37271 N 0.833
evm.TU.contig_38155.1 Carica papaya evm.TU.contig_38155.1 N 0.708
evm.TU.contig_38604 Carica papaya evm.TU.contig_38604 N 0.729
evm.TU.contig_41623 Carica papaya evm.TU.contig_41623 N 0.833
evm.TU.supercontig_106.18 Carica papaya evm.TU.supercontig_106.18 N 0.833
evm.TU.supercontig_106.19 Carica papaya evm.TU.supercontig_106.19 N 0.833
evm.TU.supercontig_106.20 Carica papaya evm.TU.supercontig_106.20 N 0.771
evm.TU.supercontig_1259.1 Carica papaya evm.TU.supercontig_1259.1 N 0.771
evm.TU.supercontig_1455.2 Carica papaya evm.TU.supercontig_1455.2 N 0.812
evm.TU.supercontig_20.86 Carica papaya evm.TU.supercontig_20.86 N 0.771
evm.TU.supercontig_347.10 Carica papaya evm.TU.supercontig_347.10 N 0.750
evm.TU.supercontig_347.11 Carica papaya evm.TU.supercontig_347.11 N 0.812
evm.TU.supercontig_347.2 Carica papaya evm.TU.supercontig_347.2 N 0.750
evm.TU.supercontig_347.7 Carica papaya evm.TU.supercontig_347.7 N 0.833
evm.TU.supercontig_347.8 Carica papaya evm.TU.supercontig_347.8 N 0.792
evm.TU.supercontig_348.3 Carica papaya evm.TU.supercontig_348.3 N 0.771
evm.TU.supercontig_348.4 Carica papaya evm.TU.supercontig_348.4 N 0.812
evm.TU.supercontig_348.8 Carica papaya evm.TU.supercontig_348.8 N 0.812
evm.TU.supercontig_348.9 Carica papaya evm.TU.supercontig_348.9 N 0.729
evm.TU.supercontig_439.1 Carica papaya evm.TU.supercontig_439.1 N 0.729
evm.TU.supercontig_439.7 Carica papaya evm.TU.supercontig_439.7 N 0.792
evm.TU.supercontig_505.2 Carica papaya evm.TU.supercontig_505.2 N 0.812
evm.TU.supercontig_505.4 Carica papaya evm.TU.supercontig_505.4 N 0.812
evm.TU.supercontig_505.5 Carica papaya evm.TU.supercontig_505.5 N 0.750
evm.TU.supercontig_505.6 Carica papaya evm.TU.supercontig_505.6 N 0.771
evm.TU.supercontig_54.67 Carica papaya evm.TU.supercontig_54.67 N 0.729
evm.TU.supercontig_54.68 Carica papaya evm.TU.supercontig_54.68 N 0.792
evm.TU.supercontig_625.4 Carica papaya evm.TU.supercontig_625.4 N 0.833
evm.TU.supercontig_654.4 Carica papaya evm.TU.supercontig_654.4 N 0.812
evm.TU.supercontig_654.5 Carica papaya evm.TU.supercontig_654.5 N 0.750
evm.TU.supercontig_654.6 Carica papaya evm.TU.supercontig_654.6 N 0.833
evm.TU.supercontig_695.1 Carica papaya evm.TU.supercontig_695.1 N 0.812
evm.TU.supercontig_695.5 Carica papaya evm.TU.supercontig_695.5 N 0.792
evm.TU.supercontig_695.7 Carica papaya evm.TU.supercontig_695.7 N 0.812
evm.TU.supercontig_695.8 Carica papaya evm.TU.supercontig_695.8 N 0.708
evm.TU.supercontig_758.1 Carica papaya evm.TU.supercontig_758.1 N 0.771
evm.TU.supercontig_758.2 Carica papaya evm.TU.supercontig_758.2 N 0.812
evm.TU.supercontig_758.4 Carica papaya evm.TU.supercontig_758.4 N 0.812
evm.TU.supercontig_851.1 Carica papaya evm.TU.supercontig_851.1 N 0.792
AGL62 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002041 N 0.896
fgenesh1_pm.C_scaffold_7000337 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7000337 N 0.792
gene01788-v1.0-hybrid Fragaria vesca gene01788-v1.0-hybrid I 0.812
gene01789-v1.0-hybrid Fragaria vesca gene01789-v1.0-hybrid N 0.854
GLYMA10G10840 Glycine max GLYMA10G10840 N 0.708
GLYMA10G10860 Glycine max GLYMA10G10860 N 0.708
GLYMA10G10930 Glycine max GLYMA10G10930 N 0.708
GLYMA10G40060 Glycine max GLYMA10G40060 N 0.792
GLYMA10G40070 Glycine max GLYMA10G40070 N 0.792
GLYMA10G40080 Glycine max GLYMA10G40080 N 0.812
GLYMA13G39016 Glycine max GLYMA13G39016 N 0.812
GLYMA20G27320 Glycine max GLYMA20G27320 N 0.812
GLYMA20G27330 Glycine max GLYMA20G27330 N 0.833
GLYMA20G27341 Glycine max GLYMA20G27341 N 0.833
GLYMA20G27350 Glycine max GLYMA20G27350 N 0.833
Gorai.002G213500 Gossypium raimondii Gorai.002G213500 N 0.875
Gorai.005G263100 Gossypium raimondii Gorai.005G263100 N 0.854
Gorai.006G127800 Gossypium raimondii Gorai.006G127800 N 0.792
LjSGA_025167.1 Lotus japonicus LjSGA_025167.1 N 0.750
LjSGA_042140.1 Lotus japonicus LjSGA_042140.1 N 0.812
LjSGA_074894.2 Lotus japonicus LjSGA_074894.2 N 0.708
LjSGA_079719.1 Lotus japonicus LjSGA_079719.1 N 0.833
Lus10012449.g Linum usitatissimum Lus10012449.g N 0.833
Lus10020511.g Linum usitatissimum Lus10020511.g N 0.854
Lus10030663.g Linum usitatissimum Lus10030663.g N 0.771
Lus10030824.g Linum usitatissimum Lus10030824.g N 0.792
Lus10031073.g Linum usitatissimum Lus10031073.g N 0.708
MDP0000168914 Malus domestica MDP0000168914 N 0.812
MDP0000221590 Malus domestica MDP0000221590 N 0.812
MDP0000233925 Malus domestica MDP0000233925 N 0.812
MDP0000278770 Malus domestica MDP0000278770 N 0.812
MDP0000434703 Malus domestica MDP0000434703 I 0.833
mgf018529m Mimulus guttatus mgf018529m N 0.792
mgf022147m Mimulus guttatus mgf022147m N 0.771
mgf022790m Mimulus guttatus mgf022790m N 0.771
mgf024307m Mimulus guttatus mgf024307m N 0.792
MTR_0121s0080 Medicago truncatula MTR_0121s0080 N 0.729
MTR_0121s0100 Medicago truncatula MTR_0121s0100 N 0.729
MTR_1g012570 Medicago truncatula MTR_1g012570 N 0.792
MTR_1g075600 Medicago truncatula MTR_1g075600 N 0.812
MTR_1g077360 Medicago truncatula MTR_1g077360 N 0.812
MTR_1g105905 Medicago truncatula MTR_1g105905 N 0.792
MTR_1g105910 Medicago truncatula MTR_1g105910 N 0.833
MTR_1g105920 Medicago truncatula MTR_1g105920 N 0.833
MTR_1g108500 Medicago truncatula MTR_1g108500 N 0.773
MTR_1g108510 Medicago truncatula MTR_1g108510 N 0.812
MTR_1g108580 Medicago truncatula MTR_1g108580 N 0.729
MTR_2g030740 Medicago truncatula MTR_2g030740 N 0.812
MTR_2g085250 Medicago truncatula MTR_2g085250 N 0.792
MTR_2g085280 Medicago truncatula MTR_2g085280 N 0.792
MTR_2g093190 Medicago truncatula MTR_2g093190 N 0.771
MTR_3g030770 Medicago truncatula MTR_3g030770 N 0.812
MTR_3g052870 Medicago truncatula MTR_3g052870 N 0.833
MTR_3g052920 Medicago truncatula MTR_3g052920 N 0.792
MTR_3g067875 Medicago truncatula MTR_3g067875 N 0.708
MTR_3g080940 Medicago truncatula MTR_3g080940 N 0.833
MTR_5g045560 Medicago truncatula MTR_5g045560 N 0.792
MTR_5g053390 Medicago truncatula MTR_5g053390 N 0.729
MTR_5g055100 Medicago truncatula MTR_5g055100 N 0.771
MTR_8g043650 Medicago truncatula MTR_8g043650 N 0.833
orange1.1g039654m.g Citrus sinensis orange1.1g039654m.g N 0.854
orange1.1g045481m.g Citrus sinensis orange1.1g045481m.g N 0.708
PGSC0003DMG400005131 Solanum tuberosum PGSC0003DMG400005131 N 0.917
PGSC0003DMG400035221 Solanum tuberosum PGSC0003DMG400035221 N 0.750
PGSC0003DMG400036006 Solanum tuberosum PGSC0003DMG400036006 N 0.729
PGSC0003DMG400036160 Solanum tuberosum PGSC0003DMG400036160 N 0.729
PGSC0003DMG400040127 Solanum tuberosum PGSC0003DMG400040127 N 0.729
PGSC0003DMG400041035 Solanum tuberosum PGSC0003DMG400041035 N 0.750
PGSC0003DMG400043633 Solanum tuberosum PGSC0003DMG400043633 N 0.792
PGSC0003DMG400044387 Solanum tuberosum PGSC0003DMG400044387 N 0.792
PGSC0003DMG400045239 Solanum tuberosum PGSC0003DMG400045239 N 0.750
Pm016629 Prunus mume Pm016629 N 0.812
Pm021017 Prunus mume Pm021017 N 0.729
Pm021018 Prunus mume Pm021018 N 0.833
Pm021070 Prunus mume Pm021070 N 0.833
Pm021071 Prunus mume Pm021071 N 0.854
POPTR_0007s03430 Populus trichocarpa POPTR_0007s03430 N 0.792
POPTR_0008s04110 Populus trichocarpa POPTR_0008s04110 N 0.729
POPTR_0009s08740 Populus trichocarpa POPTR_0009s08740 N 0.771
POPTR_0009s08750 Populus trichocarpa POPTR_0009s08750 N 0.854
POPTR_0017s07460 Populus trichocarpa POPTR_0017s07460 N 0.812
PRUPE_ppa017246mg Prunus persica PRUPE_ppa017246mg N 0.833
PRUPE_ppa022494mg Prunus persica PRUPE_ppa022494mg N 0.729
PRUPE_ppa023670mg Prunus persica PRUPE_ppa023670mg N 0.812
PRUPE_ppa026089mg Prunus persica PRUPE_ppa026089mg N 0.833
PRUPE_ppa026127mg Prunus persica PRUPE_ppa026127mg N 0.854
SapurV1A.0019s0690 Salix purpurea SapurV1A.0019s0690 N 0.875
SapurV1A.0019s0700 Salix purpurea SapurV1A.0019s0700 N 0.792
SapurV1A.0808s0160 Salix purpurea SapurV1A.0808s0160 N 0.750
SapurV1A.1313s0050 Salix purpurea SapurV1A.1313s0050 N 0.812
scaffold_302326.1 Arabidopsis lyrata scaffold_302326.1 I 0.812
scaffold_400572.1 Arabidopsis lyrata scaffold_400572.1 N 0.750
Solyc01g106710.1 Solanum lycopersicum Solyc01g106710.1 N 0.792
Solyc01g106720.1 Solanum lycopersicum Solyc01g106720.1 N 0.917
Solyc01g106730.1 Solanum lycopersicum Solyc01g106730.1 N 0.854
TCM_006323 Theobroma cacao TCM_006323 N 0.833
TCM_006324 Theobroma cacao TCM_006324 N 0.792
TCM_040735 Theobroma cacao TCM_040735 N 0.771
Thhalv10000479m.g Eutrema salsugineum Thhalv10000479m.g N 0.792
Thhalv10003338m.g Eutrema salsugineum Thhalv10003338m.g N 0.792
Thhalv10003426m.g Eutrema salsugineum Thhalv10003426m.g N 0.792
Thhalv10012100m.g Eutrema salsugineum Thhalv10012100m.g I 0.763
Thhalv10015908m.g Eutrema salsugineum Thhalv10015908m.g N 0.812
Thhalv10017754m.g Eutrema salsugineum Thhalv10017754m.g N 0.792
Thhalv10022102m.g Eutrema salsugineum Thhalv10022102m.g N 0.833
Thhalv10027307m.g Eutrema salsugineum Thhalv10027307m.g N 0.771
Thhalv10028255m.g Eutrema salsugineum Thhalv10028255m.g N 0.729
VIT_01s0010g01500 Vitis vinifera VIT_01s0010g01500 N 0.896
VIT_01s0010g01530 Vitis vinifera VIT_01s0010g01530 N 0.812
VIT_03s0088g00510 Vitis vinifera VIT_03s0088g00510 N 0.938
VIT_03s0088g00590 Vitis vinifera VIT_03s0088g00590 N 0.750
VIT_03s0088g00600 Vitis vinifera VIT_03s0088g00600 N 0.917
VIT_03s0088g00610 Vitis vinifera VIT_03s0088g00610 N 0.771