Ca_04660 (Cicer arietinum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Ca_04660 T256889_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Ca_04660 MADS box 17 64

Links

Other MADS box family TFs
Other Cicer arietinum TFs

254 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29613.m000367 Ricinus communis 29613.m000367 N 0.750
29838.m001672 Ricinus communis 29838.m001672 N 0.729
30099.m001671 Ricinus communis 30099.m001671 N 0.708
30099.m001672 Ricinus communis 30099.m001672 N 0.875
AGL23 Arabidopsis thaliana AT1G65360 N 0.750
AGL28 Arabidopsis thaliana AT1G01530 N 0.792
AGL61 Arabidopsis lyrata Al_scaffold_0004_541 N 0.750
AGL61 Arabidopsis thaliana AT2G24840 N 0.750
AGL62 Arabidopsis thaliana AT5G60440 I 0.896
AGL62 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002041 N 0.875
Al_scaffold_0001_74 Arabidopsis lyrata Al_scaffold_0001_74 N 0.833
Al_scaffold_0002_1221 Arabidopsis lyrata Al_scaffold_0002_1221 N 0.792
Aquca_054_00126 Aquilegia coerulea Aquca_054_00126 N 0.708
AT4G36590 Arabidopsis thaliana AT4G36590 N 0.875
Bo1g112460 Brassica oleracea Bo1g112460 N 0.896
Bo2g024910 Brassica oleracea Bo2g024910 N 0.708
Bo4g070340 Brassica oleracea Bo4g070340 N 0.745
Bo4g157220 Brassica oleracea Bo4g157220 N 0.708
Bo4g165540 Brassica oleracea Bo4g165540 N 0.750
Bo5g113750 Brassica oleracea Bo5g113750 N 0.875
Bo8g099550 Brassica oleracea Bo8g099550 N 0.708
Bo9g142570 Brassica oleracea Bo9g142570 N 0.812
Bostr.26833s0197 Boechera stricta Bostr.26833s0197 N 0.896
Bostr.5325s0071 Boechera stricta Bostr.5325s0071 N 0.854
Bostr.7867s1515 Boechera stricta Bostr.7867s1515 N 0.875
Bostr.8705s0016 Boechera stricta Bostr.8705s0016 N 0.750
Bra002480 Brassica rapa Bra002480 N 0.812
Bra007829 Brassica rapa Bra007829 N 0.708
Bra011938 Brassica rapa Bra011938 N 0.750
Bra020247 Brassica rapa Bra020247 N 0.729
Bra022434 Brassica rapa Bra022434 N 0.854
Bra026764 Brassica rapa Bra026764 N 0.729
Bra035685 Brassica rapa Bra035685 N 0.723
Bra038225 Brassica rapa Bra038225 N 0.875
Cagra.1004s0007 Capsella grandiflora Cagra.1004s0007 N 0.750
Cagra.1695s0023 Capsella grandiflora Cagra.1695s0023 N 0.812
Cagra.1968s0094 Capsella grandiflora Cagra.1968s0094 N 0.771
Cagra.2519s0016 Capsella grandiflora Cagra.2519s0016 N 0.896
Carubv10007644m.g Capsella rubella Carubv10007644m.g N 0.812
Carubv10010156m.g Capsella rubella Carubv10010156m.g N 0.771
Carubv10024914m.g Capsella rubella Carubv10024914m.g N 0.750
Carubv10028580m.g Capsella rubella Carubv10028580m.g N 0.896
cassava21387.m1 Manihot esculenta cassava21387.m1 N 0.750
cassava21573.m1 Manihot esculenta cassava21573.m1 N 0.750
cassava33542.m1 Manihot esculenta cassava33542.m1 N 0.896
cassava41915.m1 Manihot esculenta cassava41915.m1 N 0.708
cassava8711.m1 Manihot esculenta cassava8711.m1 N 0.792
Ca_04659 Cicer arietinum Ca_04659 N 1.000
Ca_04661 Cicer arietinum Ca_04661 N 0.938
Ca_04662 Cicer arietinum Ca_04662 N 0.896
Ca_04665 Cicer arietinum Ca_04665 N 0.958
Ca_07607 Cicer arietinum Ca_07607 N 0.729
Ca_26354 Cicer arietinum Ca_26354 N 0.729
chr1.CM0088.830.nc Lotus japonicus chr1.CM0088.830.nc N 0.750
chr1.LjB17A22.60.nc Lotus japonicus chr1.LjB17A22.60.nc N 0.708
chr2.CM0250.170.nc Lotus japonicus chr2.CM0250.170.nc N 0.708
chr2.CM0904.120.nd Lotus japonicus chr2.CM0904.120.nd N 0.854
chr3.CM0279.290.nc Lotus japonicus chr3.CM0279.290.nc N 0.854
chr5.LjT25B19.190.nd Lotus japonicus chr5.LjT25B19.190.nd N 0.771
chr5.LjT39E05.40.nd Lotus japonicus chr5.LjT39E05.40.nd N 0.812
Ciclev10030142m.g Citrus clementina Ciclev10030142m.g N 0.854
Cla006571 Citrullus lanatus Cla006571 N 0.896
Cucsa.298560 Cucumis sativus Cucsa.298560 N 0.896
Eucgr.G01185 Eucalyptus grandis Eucgr.G01185 N 0.708
Eucgr.H04834 Eucalyptus grandis Eucgr.H04834 N 0.729
Eucgr.I02506 Eucalyptus grandis Eucgr.I02506 N 0.896
evm.TU.contig_24748.4 Carica papaya evm.TU.contig_24748.4 N 0.833
evm.TU.contig_24748.5 Carica papaya evm.TU.contig_24748.5 N 0.750
evm.TU.contig_26687.3 Carica papaya evm.TU.contig_26687.3 N 0.833
evm.TU.contig_27313 Carica papaya evm.TU.contig_27313 N 0.792
evm.TU.contig_27553.3 Carica papaya evm.TU.contig_27553.3 N 0.750
evm.TU.contig_28241.1 Carica papaya evm.TU.contig_28241.1 N 0.833
evm.TU.contig_30005.4 Carica papaya evm.TU.contig_30005.4 N 0.854
evm.TU.contig_30114.1 Carica papaya evm.TU.contig_30114.1 N 0.833
evm.TU.contig_30689 Carica papaya evm.TU.contig_30689 N 0.812
evm.TU.contig_30908.1 Carica papaya evm.TU.contig_30908.1 N 0.833
evm.TU.contig_33038 Carica papaya evm.TU.contig_33038 N 0.833
evm.TU.contig_33091.3 Carica papaya evm.TU.contig_33091.3 N 0.708
evm.TU.contig_35157.1 Carica papaya evm.TU.contig_35157.1 N 0.792
evm.TU.contig_35157.2 Carica papaya evm.TU.contig_35157.2 N 0.729
evm.TU.contig_35713 Carica papaya evm.TU.contig_35713 N 0.854
evm.TU.contig_35751 Carica papaya evm.TU.contig_35751 N 0.854
evm.TU.contig_37082 Carica papaya evm.TU.contig_37082 N 0.750
evm.TU.contig_37271 Carica papaya evm.TU.contig_37271 N 0.854
evm.TU.contig_37489 Carica papaya evm.TU.contig_37489 N 0.750
evm.TU.contig_37718 Carica papaya evm.TU.contig_37718 N 0.708
evm.TU.contig_37906 Carica papaya evm.TU.contig_37906 N 0.708
evm.TU.contig_38155.1 Carica papaya evm.TU.contig_38155.1 N 0.708
evm.TU.contig_38604 Carica papaya evm.TU.contig_38604 N 0.750
evm.TU.contig_41623 Carica papaya evm.TU.contig_41623 N 0.812
evm.TU.contig_46312 Carica papaya evm.TU.contig_46312 N 0.750
evm.TU.supercontig_106.18 Carica papaya evm.TU.supercontig_106.18 N 0.854
evm.TU.supercontig_106.19 Carica papaya evm.TU.supercontig_106.19 N 0.854
evm.TU.supercontig_106.20 Carica papaya evm.TU.supercontig_106.20 N 0.792
evm.TU.supercontig_109.51 Carica papaya evm.TU.supercontig_109.51 N 0.727
evm.TU.supercontig_1259.1 Carica papaya evm.TU.supercontig_1259.1 N 0.792
evm.TU.supercontig_1455.2 Carica papaya evm.TU.supercontig_1455.2 N 0.833
evm.TU.supercontig_20.86 Carica papaya evm.TU.supercontig_20.86 N 0.708
evm.TU.supercontig_347.10 Carica papaya evm.TU.supercontig_347.10 N 0.771
evm.TU.supercontig_347.11 Carica papaya evm.TU.supercontig_347.11 N 0.833
evm.TU.supercontig_347.14 Carica papaya evm.TU.supercontig_347.14 N 0.708
evm.TU.supercontig_347.2 Carica papaya evm.TU.supercontig_347.2 N 0.750
evm.TU.supercontig_347.7 Carica papaya evm.TU.supercontig_347.7 N 0.854
evm.TU.supercontig_347.8 Carica papaya evm.TU.supercontig_347.8 N 0.812
evm.TU.supercontig_348.3 Carica papaya evm.TU.supercontig_348.3 N 0.792
evm.TU.supercontig_348.4 Carica papaya evm.TU.supercontig_348.4 N 0.833
evm.TU.supercontig_348.8 Carica papaya evm.TU.supercontig_348.8 N 0.833
evm.TU.supercontig_348.9 Carica papaya evm.TU.supercontig_348.9 N 0.708
evm.TU.supercontig_439.1 Carica papaya evm.TU.supercontig_439.1 N 0.750
evm.TU.supercontig_439.7 Carica papaya evm.TU.supercontig_439.7 N 0.854
evm.TU.supercontig_505.2 Carica papaya evm.TU.supercontig_505.2 N 0.833
evm.TU.supercontig_505.4 Carica papaya evm.TU.supercontig_505.4 N 0.833
evm.TU.supercontig_505.5 Carica papaya evm.TU.supercontig_505.5 N 0.750
evm.TU.supercontig_505.6 Carica papaya evm.TU.supercontig_505.6 N 0.792
evm.TU.supercontig_54.67 Carica papaya evm.TU.supercontig_54.67 N 0.750
evm.TU.supercontig_54.68 Carica papaya evm.TU.supercontig_54.68 N 0.812
evm.TU.supercontig_625.4 Carica papaya evm.TU.supercontig_625.4 N 0.854
evm.TU.supercontig_654.4 Carica papaya evm.TU.supercontig_654.4 N 0.833
evm.TU.supercontig_654.5 Carica papaya evm.TU.supercontig_654.5 N 0.750
evm.TU.supercontig_654.6 Carica papaya evm.TU.supercontig_654.6 N 0.854
evm.TU.supercontig_695.1 Carica papaya evm.TU.supercontig_695.1 N 0.833
evm.TU.supercontig_695.5 Carica papaya evm.TU.supercontig_695.5 N 0.812
evm.TU.supercontig_695.7 Carica papaya evm.TU.supercontig_695.7 N 0.833
evm.TU.supercontig_758.1 Carica papaya evm.TU.supercontig_758.1 N 0.771
evm.TU.supercontig_758.2 Carica papaya evm.TU.supercontig_758.2 N 0.833
evm.TU.supercontig_758.4 Carica papaya evm.TU.supercontig_758.4 N 0.833
evm.TU.supercontig_851.1 Carica papaya evm.TU.supercontig_851.1 N 0.771
fgenesh1_pm.C_scaffold_7000337 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7000337 N 0.854
gene01788-v1.0-hybrid Fragaria vesca gene01788-v1.0-hybrid I 0.750
gene01789-v1.0-hybrid Fragaria vesca gene01789-v1.0-hybrid N 0.875
GLYMA02G35080 Glycine max GLYMA02G35080 N 0.702
GLYMA10G10610 Glycine max GLYMA10G10610 N 0.708
GLYMA10G10640 Glycine max GLYMA10G10640 N 0.771
GLYMA10G10690 Glycine max GLYMA10G10690 N 0.750
GLYMA10G10770 Glycine max GLYMA10G10770 N 0.729
GLYMA10G10840 Glycine max GLYMA10G10840 N 0.750
GLYMA10G10860 Glycine max GLYMA10G10860 N 0.750
GLYMA10G10900 Glycine max GLYMA10G10900 N 0.729
GLYMA10G10920 Glycine max GLYMA10G10920 N 0.729
GLYMA10G10930 Glycine max GLYMA10G10930 N 0.750
GLYMA10G11450 Glycine max GLYMA10G11450 N 0.729
GLYMA10G40060 Glycine max GLYMA10G40060 N 0.708
GLYMA10G40070 Glycine max GLYMA10G40070 N 0.896
GLYMA10G40080 Glycine max GLYMA10G40080 N 0.875
GLYMA13G39016 Glycine max GLYMA13G39016 N 0.854
GLYMA20G27320 Glycine max GLYMA20G27320 N 0.958
GLYMA20G27330 Glycine max GLYMA20G27330 N 0.938
GLYMA20G27341 Glycine max GLYMA20G27341 N 0.917
GLYMA20G27350 Glycine max GLYMA20G27350 N 0.729
Gorai.002G213500 Gossypium raimondii Gorai.002G213500 N 0.833
Gorai.005G263100 Gossypium raimondii Gorai.005G263100 N 0.854
Gorai.006G127800 Gossypium raimondii Gorai.006G127800 N 0.729
LjSGA_020620.1 Lotus japonicus LjSGA_020620.1 N 0.708
LjSGA_025167.1 Lotus japonicus LjSGA_025167.1 N 0.812
LjSGA_042140.1 Lotus japonicus LjSGA_042140.1 N 0.708
LjSGA_067087.1 Lotus japonicus LjSGA_067087.1 N 0.729
LjSGA_079719.1 Lotus japonicus LjSGA_079719.1 N 0.729
LjSGA_082681.2 Lotus japonicus LjSGA_082681.2 N 0.708
LjSGA_120826.2 Lotus japonicus LjSGA_120826.2 N 0.708
LjT01D09.100.nd Lotus japonicus LjT01D09.100.nd N 0.729
Lus10012449.g Linum usitatissimum Lus10012449.g N 0.771
Lus10020511.g Linum usitatissimum Lus10020511.g N 0.792
Lus10030663.g Linum usitatissimum Lus10030663.g N 0.729
Lus10030824.g Linum usitatissimum Lus10030824.g N 0.708
Lus10031073.g Linum usitatissimum Lus10031073.g N 0.729
Lus10035456.g Linum usitatissimum Lus10035456.g N 0.729
MDP0000168914 Malus domestica MDP0000168914 N 0.750
MDP0000221590 Malus domestica MDP0000221590 N 0.812
MDP0000233925 Malus domestica MDP0000233925 N 0.896
MDP0000278770 Malus domestica MDP0000278770 N 0.896
MDP0000434703 Malus domestica MDP0000434703 I 0.917
mgf018529m Mimulus guttatus mgf018529m N 0.750
mgf022147m Mimulus guttatus mgf022147m N 0.750
mgf022790m Mimulus guttatus mgf022790m N 0.750
mgf024307m Mimulus guttatus mgf024307m N 0.750
MTR_0121s0080 Medicago truncatula MTR_0121s0080 N 0.792
MTR_0121s0100 Medicago truncatula MTR_0121s0100 N 0.771
MTR_1g012570 Medicago truncatula MTR_1g012570 N 0.938
MTR_1g075570 Medicago truncatula MTR_1g075570 N 0.800
MTR_1g075600 Medicago truncatula MTR_1g075600 N 0.896
MTR_1g077360 Medicago truncatula MTR_1g077360 N 0.896
MTR_1g105905 Medicago truncatula MTR_1g105905 N 0.896
MTR_1g105910 Medicago truncatula MTR_1g105910 N 0.938
MTR_1g105920 Medicago truncatula MTR_1g105920 N 0.938
MTR_1g108500 Medicago truncatula MTR_1g108500 N 0.795
MTR_1g108510 Medicago truncatula MTR_1g108510 N 0.875
MTR_1g108580 Medicago truncatula MTR_1g108580 N 0.812
MTR_2g030740 Medicago truncatula MTR_2g030740 N 0.875
MTR_2g085250 Medicago truncatula MTR_2g085250 N 0.896
MTR_2g085280 Medicago truncatula MTR_2g085280 N 0.896
MTR_2g093190 Medicago truncatula MTR_2g093190 N 0.833
MTR_3g030770 Medicago truncatula MTR_3g030770 N 0.875
MTR_3g052870 Medicago truncatula MTR_3g052870 N 0.938
MTR_3g052920 Medicago truncatula MTR_3g052920 N 0.938
MTR_3g067870 Medicago truncatula MTR_3g067870 N 0.745
MTR_3g067875 Medicago truncatula MTR_3g067875 N 0.875
MTR_3g067910 Medicago truncatula MTR_3g067910 N 0.778
MTR_3g080940 Medicago truncatula MTR_3g080940 N 0.729
MTR_5g045560 Medicago truncatula MTR_5g045560 N 0.938
MTR_5g053390 Medicago truncatula MTR_5g053390 N 0.875
MTR_5g055100 Medicago truncatula MTR_5g055100 N 0.875
MTR_8g043650 Medicago truncatula MTR_8g043650 N 0.938
orange1.1g039654m.g Citrus sinensis orange1.1g039654m.g N 0.854
PGSC0003DMG400005131 Solanum tuberosum PGSC0003DMG400005131 N 0.833
PGSC0003DMG400036006 Solanum tuberosum PGSC0003DMG400036006 N 0.702
PGSC0003DMG400036160 Solanum tuberosum PGSC0003DMG400036160 N 0.708
PGSC0003DMG400040127 Solanum tuberosum PGSC0003DMG400040127 N 0.729
PGSC0003DMG400041035 Solanum tuberosum PGSC0003DMG400041035 N 0.729
PGSC0003DMG400043633 Solanum tuberosum PGSC0003DMG400043633 N 0.708
PGSC0003DMG400044387 Solanum tuberosum PGSC0003DMG400044387 N 0.750
PGSC0003DMG400045239 Solanum tuberosum PGSC0003DMG400045239 N 0.708
PGSC0003DMG400046733 Solanum tuberosum PGSC0003DMG400046733 N 0.702
Pm016629 Prunus mume Pm016629 N 0.708
Pm021017 Prunus mume Pm021017 N 0.792
Pm021018 Prunus mume Pm021018 N 0.833
Pm021070 Prunus mume Pm021070 N 0.771
Pm021071 Prunus mume Pm021071 N 0.917
Pm030655 Prunus mume Pm030655 I 0.708
POPTR_0007s03410 Populus trichocarpa POPTR_0007s03410 N 0.750
POPTR_0007s03430 Populus trichocarpa POPTR_0007s03430 N 0.833
POPTR_0009s08750 Populus trichocarpa POPTR_0009s08750 N 0.854
POPTR_0017s07460 Populus trichocarpa POPTR_0017s07460 N 0.875
PRUPE_ppa017246mg Prunus persica PRUPE_ppa017246mg N 0.771
PRUPE_ppa022494mg Prunus persica PRUPE_ppa022494mg N 0.792
PRUPE_ppa023670mg Prunus persica PRUPE_ppa023670mg N 0.708
PRUPE_ppa026089mg Prunus persica PRUPE_ppa026089mg N 0.833
PRUPE_ppa026127mg Prunus persica PRUPE_ppa026127mg N 0.917
SapurV1A.0019s0690 Salix purpurea SapurV1A.0019s0690 N 0.875
SapurV1A.0019s0700 Salix purpurea SapurV1A.0019s0700 N 0.708
SapurV1A.0808s0160 Salix purpurea SapurV1A.0808s0160 N 0.854
SapurV1A.1313s0050 Salix purpurea SapurV1A.1313s0050 N 0.875
scaffold_302326.1 Arabidopsis lyrata scaffold_302326.1 I 0.833
scaffold_400572.1 Arabidopsis lyrata scaffold_400572.1 N 0.729
Solyc01g106710.1 Solanum lycopersicum Solyc01g106710.1 N 0.750
Solyc01g106720.1 Solanum lycopersicum Solyc01g106720.1 N 0.833
Solyc01g106730.1 Solanum lycopersicum Solyc01g106730.1 N 0.833
TCM_006323 Theobroma cacao TCM_006323 N 0.854
TCM_040735 Theobroma cacao TCM_040735 N 0.750
Thhalv10000432m.g Eutrema salsugineum Thhalv10000432m.g N 0.708
Thhalv10000479m.g Eutrema salsugineum Thhalv10000479m.g N 0.750
Thhalv10003338m.g Eutrema salsugineum Thhalv10003338m.g N 0.750
Thhalv10003426m.g Eutrema salsugineum Thhalv10003426m.g N 0.812
Thhalv10012100m.g Eutrema salsugineum Thhalv10012100m.g I 0.816
Thhalv10015908m.g Eutrema salsugineum Thhalv10015908m.g N 0.875
Thhalv10017754m.g Eutrema salsugineum Thhalv10017754m.g N 0.750
Thhalv10022102m.g Eutrema salsugineum Thhalv10022102m.g N 0.896
Thhalv10027307m.g Eutrema salsugineum Thhalv10027307m.g N 0.833
VIT_01s0010g01500 Vitis vinifera VIT_01s0010g01500 N 0.833
VIT_01s0010g01530 Vitis vinifera VIT_01s0010g01530 N 0.792
VIT_03s0088g00510 Vitis vinifera VIT_03s0088g00510 N 0.833
VIT_03s0088g00550 Vitis vinifera VIT_03s0088g00550 N 0.812
VIT_03s0088g00590 Vitis vinifera VIT_03s0088g00590 N 0.771
VIT_03s0088g00600 Vitis vinifera VIT_03s0088g00600 N 0.833
VIT_03s0088g00610 Vitis vinifera VIT_03s0088g00610 N 0.729