PDK_20s1551551g001 (Phoenix dactylifera)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 PDK_20s1551551g001 T259451_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL91
M10922_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT3G66656_01 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PDK_20s1551551g001 MADS box 16 63

Links

Other MADS box family TFs
Other Phoenix dactylifera TFs

37 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
27866.m000233 Ricinus communis 27866.m000233 N 0.000
29613.m000367 Ricinus communis 29613.m000367 N 0.000
29838.m001672 Ricinus communis 29838.m001672 N 0.000
30099.m001671 Ricinus communis 30099.m001671 N 0.000
30099.m001672 Ricinus communis 30099.m001672 N 0.000
AGL23 Arabidopsis thaliana AT1G65360 N 0.000
AGL28 Arabidopsis thaliana AT1G01530 N 0.000
AGL61 Arabidopsis lyrata Al_scaffold_0004_541 N 0.000
AGL61 Arabidopsis thaliana AT2G24840 N 0.000
AGL62 Arabidopsis thaliana AT5G60440 I 0.000
AGL62 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002041 N 0.000
Al_scaffold_0001_74 Arabidopsis lyrata Al_scaffold_0001_74 N 0.000
Al_scaffold_0002_1221 Arabidopsis lyrata Al_scaffold_0002_1221 N 0.000
Aquca_041_00050 Aquilegia coerulea Aquca_041_00050 N 0.000
AT4G36590 Arabidopsis thaliana AT4G36590 N 0.000
Bo1g112460 Brassica oleracea Bo1g112460 N 0.000
Bo2g024910 Brassica oleracea Bo2g024910 N 0.000
Bo4g070340 Brassica oleracea Bo4g070340 N 0.000
Bo4g165540 Brassica oleracea Bo4g165540 N 0.000
Bo5g113750 Brassica oleracea Bo5g113750 N 0.000
Bo8g099550 Brassica oleracea Bo8g099550 N 0.708
Bo9g142570 Brassica oleracea Bo9g142570 N 0.000
Bostr.26833s0197 Boechera stricta Bostr.26833s0197 N 0.000
Bostr.5325s0071 Boechera stricta Bostr.5325s0071 N 0.000
Bostr.7867s1515 Boechera stricta Bostr.7867s1515 N 0.000
Bostr.8705s0016 Boechera stricta Bostr.8705s0016 N 0.000
Bra002480 Brassica rapa Bra002480 N 0.000
Bra007829 Brassica rapa Bra007829 N 0.708
Bra011938 Brassica rapa Bra011938 N 0.000
Bra022434 Brassica rapa Bra022434 N 0.000
Bra026764 Brassica rapa Bra026764 N 0.000
Bra032057 Brassica rapa Bra032057 N 0.729
Bra035685 Brassica rapa Bra035685 N 0.000
Bra038225 Brassica rapa Bra038225 N 0.000
Cagra.1004s0007 Capsella grandiflora Cagra.1004s0007 N 0.000
Cagra.1695s0023 Capsella grandiflora Cagra.1695s0023 N 0.000
Cagra.1968s0094 Capsella grandiflora Cagra.1968s0094 N 0.000
Cagra.2519s0016 Capsella grandiflora Cagra.2519s0016 N 0.000
Carubv10007644m.g Capsella rubella Carubv10007644m.g N 0.000
Carubv10010156m.g Capsella rubella Carubv10010156m.g N 0.000
Carubv10024914m.g Capsella rubella Carubv10024914m.g N 0.000
Carubv10028580m.g Capsella rubella Carubv10028580m.g N 0.000
cassava21387.m1 Manihot esculenta cassava21387.m1 N 0.000
cassava21573.m1 Manihot esculenta cassava21573.m1 N 0.000
cassava33542.m1 Manihot esculenta cassava33542.m1 N 0.000
cassava41915.m1 Manihot esculenta cassava41915.m1 N 0.000
cassava8711.m1 Manihot esculenta cassava8711.m1 N 0.000
Ca_04659 Cicer arietinum Ca_04659 N 0.000
Ca_04660 Cicer arietinum Ca_04660 N 0.000
Ca_04661 Cicer arietinum Ca_04661 N 0.000
Ca_04662 Cicer arietinum Ca_04662 N 0.000
Ca_04665 Cicer arietinum Ca_04665 N 0.000
Ca_07607 Cicer arietinum Ca_07607 N 0.000
Ca_26354 Cicer arietinum Ca_26354 N 0.000
chr1.CM0088.830.nc Lotus japonicus chr1.CM0088.830.nc N 0.000
chr2.CM0904.120.nd Lotus japonicus chr2.CM0904.120.nd N 0.000
chr3.CM0279.290.nc Lotus japonicus chr3.CM0279.290.nc N 0.000
chr5.LjT25B19.190.nd Lotus japonicus chr5.LjT25B19.190.nd N 0.000
chr5.LjT39E05.40.nd Lotus japonicus chr5.LjT39E05.40.nd N 0.000
Ciclev10013802m.g Citrus clementina Ciclev10013802m.g N 0.000
Ciclev10030142m.g Citrus clementina Ciclev10030142m.g N 0.000
Cla006571 Citrullus lanatus Cla006571 N 0.000
Cla010744 Citrullus lanatus Cla010744 N 0.000
Cucsa.298560 Cucumis sativus Cucsa.298560 N 0.000
Eucgr.H04834 Eucalyptus grandis Eucgr.H04834 N 0.000
Eucgr.I02506 Eucalyptus grandis Eucgr.I02506 N 0.000
evm.TU.contig_24748.4 Carica papaya evm.TU.contig_24748.4 N 0.000
evm.TU.contig_24748.5 Carica papaya evm.TU.contig_24748.5 N 0.000
evm.TU.contig_26687.3 Carica papaya evm.TU.contig_26687.3 N 0.000
evm.TU.contig_27313 Carica papaya evm.TU.contig_27313 N 0.000
evm.TU.contig_27553.3 Carica papaya evm.TU.contig_27553.3 N 0.000
evm.TU.contig_27553.5 Carica papaya evm.TU.contig_27553.5 N 0.000
evm.TU.contig_28241.1 Carica papaya evm.TU.contig_28241.1 N 0.000
evm.TU.contig_30114.1 Carica papaya evm.TU.contig_30114.1 N 0.000
evm.TU.contig_30689 Carica papaya evm.TU.contig_30689 N 0.000
evm.TU.contig_30908.1 Carica papaya evm.TU.contig_30908.1 N 0.000
evm.TU.contig_33038 Carica papaya evm.TU.contig_33038 N 0.000
evm.TU.contig_33091.3 Carica papaya evm.TU.contig_33091.3 N 0.000
evm.TU.contig_35157.1 Carica papaya evm.TU.contig_35157.1 N 0.000
evm.TU.contig_35157.2 Carica papaya evm.TU.contig_35157.2 N 0.000
evm.TU.contig_35713 Carica papaya evm.TU.contig_35713 N 0.000
evm.TU.contig_35751 Carica papaya evm.TU.contig_35751 N 0.000
evm.TU.contig_37082 Carica papaya evm.TU.contig_37082 N 0.000
evm.TU.contig_37271 Carica papaya evm.TU.contig_37271 N 0.000
evm.TU.contig_37489 Carica papaya evm.TU.contig_37489 N 0.000
evm.TU.contig_38155.1 Carica papaya evm.TU.contig_38155.1 N 0.000
evm.TU.contig_38604 Carica papaya evm.TU.contig_38604 N 0.000
evm.TU.contig_41453 Carica papaya evm.TU.contig_41453 N 0.000
evm.TU.contig_41623 Carica papaya evm.TU.contig_41623 N 0.000
evm.TU.contig_43014 Carica papaya evm.TU.contig_43014 N 0.000
evm.TU.contig_46312 Carica papaya evm.TU.contig_46312 N 0.000
evm.TU.contig_47064.2 Carica papaya evm.TU.contig_47064.2 N 0.000
evm.TU.supercontig_106.18 Carica papaya evm.TU.supercontig_106.18 N 0.000
evm.TU.supercontig_106.19 Carica papaya evm.TU.supercontig_106.19 N 0.000
evm.TU.supercontig_106.20 Carica papaya evm.TU.supercontig_106.20 N 0.000
evm.TU.supercontig_106.21 Carica papaya evm.TU.supercontig_106.21 N 0.000
evm.TU.supercontig_1259.1 Carica papaya evm.TU.supercontig_1259.1 N 0.000
evm.TU.supercontig_1455.2 Carica papaya evm.TU.supercontig_1455.2 N 0.000
evm.TU.supercontig_20.86 Carica papaya evm.TU.supercontig_20.86 N 0.000
evm.TU.supercontig_347.10 Carica papaya evm.TU.supercontig_347.10 N 0.000
evm.TU.supercontig_347.11 Carica papaya evm.TU.supercontig_347.11 N 0.000
evm.TU.supercontig_347.2 Carica papaya evm.TU.supercontig_347.2 N 0.000
evm.TU.supercontig_347.7 Carica papaya evm.TU.supercontig_347.7 N 0.000
evm.TU.supercontig_347.8 Carica papaya evm.TU.supercontig_347.8 N 0.000
evm.TU.supercontig_348.1 Carica papaya evm.TU.supercontig_348.1 N 0.000
evm.TU.supercontig_348.3 Carica papaya evm.TU.supercontig_348.3 N 0.000
evm.TU.supercontig_348.4 Carica papaya evm.TU.supercontig_348.4 N 0.000
evm.TU.supercontig_348.8 Carica papaya evm.TU.supercontig_348.8 N 0.000
evm.TU.supercontig_348.9 Carica papaya evm.TU.supercontig_348.9 N 0.000
evm.TU.supercontig_439.1 Carica papaya evm.TU.supercontig_439.1 N 0.000
evm.TU.supercontig_439.7 Carica papaya evm.TU.supercontig_439.7 N 0.000
evm.TU.supercontig_505.2 Carica papaya evm.TU.supercontig_505.2 N 0.000
evm.TU.supercontig_505.4 Carica papaya evm.TU.supercontig_505.4 N 0.000
evm.TU.supercontig_505.5 Carica papaya evm.TU.supercontig_505.5 N 0.000
evm.TU.supercontig_505.6 Carica papaya evm.TU.supercontig_505.6 N 0.000
evm.TU.supercontig_54.67 Carica papaya evm.TU.supercontig_54.67 N 0.000
evm.TU.supercontig_54.68 Carica papaya evm.TU.supercontig_54.68 N 0.000
evm.TU.supercontig_625.4 Carica papaya evm.TU.supercontig_625.4 N 0.000
evm.TU.supercontig_654.4 Carica papaya evm.TU.supercontig_654.4 N 0.000
evm.TU.supercontig_654.5 Carica papaya evm.TU.supercontig_654.5 N 0.000
evm.TU.supercontig_654.6 Carica papaya evm.TU.supercontig_654.6 N 0.000
evm.TU.supercontig_695.1 Carica papaya evm.TU.supercontig_695.1 N 0.000
evm.TU.supercontig_695.5 Carica papaya evm.TU.supercontig_695.5 N 0.000
evm.TU.supercontig_695.6 Carica papaya evm.TU.supercontig_695.6 N 0.000
evm.TU.supercontig_695.7 Carica papaya evm.TU.supercontig_695.7 N 0.000
evm.TU.supercontig_695.8 Carica papaya evm.TU.supercontig_695.8 N 0.000
evm.TU.supercontig_758.1 Carica papaya evm.TU.supercontig_758.1 N 0.000
evm.TU.supercontig_758.2 Carica papaya evm.TU.supercontig_758.2 N 0.000
evm.TU.supercontig_758.4 Carica papaya evm.TU.supercontig_758.4 N 0.000
evm.TU.supercontig_851.1 Carica papaya evm.TU.supercontig_851.1 N 0.000
fgenesh1_pm.C_scaffold_7000337 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7000337 N 0.000
gene01789-v1.0-hybrid Fragaria vesca gene01789-v1.0-hybrid N 0.000
GLYMA10G10640 Glycine max GLYMA10G10640 N 0.000
GLYMA10G10690 Glycine max GLYMA10G10690 N 0.000
GLYMA10G10770 Glycine max GLYMA10G10770 N 0.000
GLYMA10G10840 Glycine max GLYMA10G10840 N 0.000
GLYMA10G10860 Glycine max GLYMA10G10860 N 0.000
GLYMA10G10900 Glycine max GLYMA10G10900 N 0.000
GLYMA10G10920 Glycine max GLYMA10G10920 N 0.000
GLYMA10G10930 Glycine max GLYMA10G10930 N 0.000
GLYMA10G11450 Glycine max GLYMA10G11450 N 0.000
GLYMA10G40060 Glycine max GLYMA10G40060 N 0.000
GLYMA10G40070 Glycine max GLYMA10G40070 N 0.000
GLYMA10G40080 Glycine max GLYMA10G40080 N 0.000
GLYMA13G39016 Glycine max GLYMA13G39016 N 0.000
GLYMA20G27320 Glycine max GLYMA20G27320 N 0.000
GLYMA20G27330 Glycine max GLYMA20G27330 N 0.000
GLYMA20G27341 Glycine max GLYMA20G27341 N 0.000
GLYMA20G27350 Glycine max GLYMA20G27350 N 0.000
Gorai.002G213500 Gossypium raimondii Gorai.002G213500 N 0.000
Gorai.005G263100 Gossypium raimondii Gorai.005G263100 N 0.000
Gorai.006G127800 Gossypium raimondii Gorai.006G127800 N 0.000
LjSGA_025167.1 Lotus japonicus LjSGA_025167.1 N 0.000
LjSGA_067087.1 Lotus japonicus LjSGA_067087.1 N 0.000
LjSGA_079719.1 Lotus japonicus LjSGA_079719.1 N 0.000
LjSGA_082681.2 Lotus japonicus LjSGA_082681.2 N 0.000
LjSGA_120826.2 Lotus japonicus LjSGA_120826.2 N 0.000
LjT01D09.100.nd Lotus japonicus LjT01D09.100.nd N 0.000
Lus10012449.g Linum usitatissimum Lus10012449.g N 0.000
Lus10020511.g Linum usitatissimum Lus10020511.g N 0.000
Lus10030663.g Linum usitatissimum Lus10030663.g N 0.000
Lus10030824.g Linum usitatissimum Lus10030824.g N 0.000
Lus10031073.g Linum usitatissimum Lus10031073.g N 0.708
Lus10035456.g Linum usitatissimum Lus10035456.g N 0.000
MDP0000168914 Malus domestica MDP0000168914 N 0.000
MDP0000221590 Malus domestica MDP0000221590 N 0.000
MDP0000233925 Malus domestica MDP0000233925 N 0.000
MDP0000278770 Malus domestica MDP0000278770 N 0.000
MDP0000434703 Malus domestica MDP0000434703 I 0.000
mgf018529m Mimulus guttatus mgf018529m N 0.000
mgf022147m Mimulus guttatus mgf022147m N 0.000
mgf022790m Mimulus guttatus mgf022790m N 0.000
mgf024307m Mimulus guttatus mgf024307m N 0.000
MTR_1g012570 Medicago truncatula MTR_1g012570 N 0.000
MTR_1g075570 Medicago truncatula MTR_1g075570 N 0.000
MTR_1g075600 Medicago truncatula MTR_1g075600 N 0.000
MTR_1g077360 Medicago truncatula MTR_1g077360 N 0.000
MTR_1g105905 Medicago truncatula MTR_1g105905 N 0.000
MTR_1g105910 Medicago truncatula MTR_1g105910 N 0.000
MTR_1g105920 Medicago truncatula MTR_1g105920 N 0.000
MTR_1g108510 Medicago truncatula MTR_1g108510 N 0.000
MTR_1g108580 Medicago truncatula MTR_1g108580 N 0.000
MTR_2g030740 Medicago truncatula MTR_2g030740 N 0.000
MTR_2g085250 Medicago truncatula MTR_2g085250 N 0.000
MTR_2g085280 Medicago truncatula MTR_2g085280 N 0.000
MTR_2g093190 Medicago truncatula MTR_2g093190 N 0.000
MTR_3g030770 Medicago truncatula MTR_3g030770 N 0.000
MTR_3g052870 Medicago truncatula MTR_3g052870 N 0.000
MTR_3g052920 Medicago truncatula MTR_3g052920 N 0.000
MTR_3g067875 Medicago truncatula MTR_3g067875 N 0.000
MTR_3g080940 Medicago truncatula MTR_3g080940 N 0.000
MTR_5g045560 Medicago truncatula MTR_5g045560 N 0.000
MTR_5g053390 Medicago truncatula MTR_5g053390 N 0.000
MTR_5g055100 Medicago truncatula MTR_5g055100 N 0.000
MTR_8g043650 Medicago truncatula MTR_8g043650 N 0.000
orange1.1g039654m.g Citrus sinensis orange1.1g039654m.g N 0.000
orange1.1g045481m.g Citrus sinensis orange1.1g045481m.g N 0.000
PGSC0003DMG400005131 Solanum tuberosum PGSC0003DMG400005131 N 0.000
PGSC0003DMG400034832 Solanum tuberosum PGSC0003DMG400034832 N 0.000
PGSC0003DMG400035221 Solanum tuberosum PGSC0003DMG400035221 N 0.000
PGSC0003DMG400036006 Solanum tuberosum PGSC0003DMG400036006 N 0.000
PGSC0003DMG400036160 Solanum tuberosum PGSC0003DMG400036160 N 0.000
PGSC0003DMG400040127 Solanum tuberosum PGSC0003DMG400040127 N 0.000
PGSC0003DMG400041035 Solanum tuberosum PGSC0003DMG400041035 N 0.000
PGSC0003DMG400044387 Solanum tuberosum PGSC0003DMG400044387 N 0.000
PGSC0003DMG400044513 Solanum tuberosum PGSC0003DMG400044513 N 0.000
Pm021017 Prunus mume Pm021017 N 0.000
Pm021018 Prunus mume Pm021018 N 0.000
Pm021070 Prunus mume Pm021070 N 0.000
Pm021071 Prunus mume Pm021071 N 0.000
Pm030655 Prunus mume Pm030655 I 0.000
POPTR_0007s03430 Populus trichocarpa POPTR_0007s03430 N 0.000
POPTR_0008s04110 Populus trichocarpa POPTR_0008s04110 N 0.000
POPTR_0009s08750 Populus trichocarpa POPTR_0009s08750 N 0.000
POPTR_0016s12650 Populus trichocarpa POPTR_0016s12650 N 0.000
POPTR_0017s07460 Populus trichocarpa POPTR_0017s07460 N 0.000
PRUPE_ppa017246mg Prunus persica PRUPE_ppa017246mg N 0.000
PRUPE_ppa022494mg Prunus persica PRUPE_ppa022494mg N 0.000
PRUPE_ppa024816mg Prunus persica PRUPE_ppa024816mg I 0.000
PRUPE_ppa026089mg Prunus persica PRUPE_ppa026089mg N 0.000
PRUPE_ppa026127mg Prunus persica PRUPE_ppa026127mg N 0.000
SapurV1A.0019s0690 Salix purpurea SapurV1A.0019s0690 N 0.000
SapurV1A.0019s0700 Salix purpurea SapurV1A.0019s0700 N 0.000
SapurV1A.0808s0160 Salix purpurea SapurV1A.0808s0160 N 0.000
SapurV1A.1128s0080 Salix purpurea SapurV1A.1128s0080 N 0.000
SapurV1A.1313s0050 Salix purpurea SapurV1A.1313s0050 N 0.000
scaffold_302326.1 Arabidopsis lyrata scaffold_302326.1 I 0.000
scaffold_400572.1 Arabidopsis lyrata scaffold_400572.1 N 0.000
Solyc01g106710.1 Solanum lycopersicum Solyc01g106710.1 N 0.000
Solyc01g106720.1 Solanum lycopersicum Solyc01g106720.1 N 0.000
Solyc01g106730.1 Solanum lycopersicum Solyc01g106730.1 N 0.000
TCM_006323 Theobroma cacao TCM_006323 N 0.000
TCM_040735 Theobroma cacao TCM_040735 N 0.000
Thhalv10000432m.g Eutrema salsugineum Thhalv10000432m.g N 0.000
Thhalv10000479m.g Eutrema salsugineum Thhalv10000479m.g N 0.000
Thhalv10003315m.g Eutrema salsugineum Thhalv10003315m.g N 0.000
Thhalv10003338m.g Eutrema salsugineum Thhalv10003338m.g N 0.000
Thhalv10003426m.g Eutrema salsugineum Thhalv10003426m.g N 0.000
Thhalv10012100m.g Eutrema salsugineum Thhalv10012100m.g I 0.000
Thhalv10015908m.g Eutrema salsugineum Thhalv10015908m.g N 0.000
Thhalv10017754m.g Eutrema salsugineum Thhalv10017754m.g N 0.000
Thhalv10022102m.g Eutrema salsugineum Thhalv10022102m.g N 0.000
Thhalv10027307m.g Eutrema salsugineum Thhalv10027307m.g N 0.000
VIT_01s0010g01500 Vitis vinifera VIT_01s0010g01500 N 0.000
VIT_01s0010g01530 Vitis vinifera VIT_01s0010g01530 N 0.000
VIT_03s0088g00510 Vitis vinifera VIT_03s0088g00510 N 0.000
VIT_03s0088g00550 Vitis vinifera VIT_03s0088g00550 N 0.000
VIT_03s0088g00590 Vitis vinifera VIT_03s0088g00590 N 0.000
VIT_03s0088g00600 Vitis vinifera VIT_03s0088g00600 N 0.000
VIT_03s0088g00610 Vitis vinifera VIT_03s0088g00610 N 0.000