CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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KNAG_0A03560
(
Kazachstania naganishii
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
KNAG_0A03560
T254495_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCK68037
MADS box
10
57
TIAEKRSRTVTFFKRKSGLLKKSKELSILCGARVGLIIISETGRLYEF
Links
Other
MADS box
family TFs
Other
Kazachstania naganishii
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGL62
Arabidopsis thaliana
AT5G60440
I
0.000
scaffold_302326.1
Arabidopsis lyrata
scaffold_302326.1
I
0.000
gene01788-v1.0-hybrid
Fragaria vesca
gene01788-v1.0-hybrid
I
0.000
MDP0000434703
Malus domestica
MDP0000434703
I
0.000
Thhalv10012100m.g
Eutrema salsugineum
Thhalv10012100m.g
I
0.000
Al_scaffold_0001_74
Arabidopsis lyrata
Al_scaffold_0001_74
N
0.000
Al_scaffold_0002_1221
Arabidopsis lyrata
Al_scaffold_0002_1221
N
0.000
AGL61
Arabidopsis lyrata
Al_scaffold_0004_541
N
0.000
AGL28
Arabidopsis thaliana
AT1G01530
N
0.000
AGL23
Arabidopsis thaliana
AT1G65360
N
0.000
AGL61
Arabidopsis thaliana
AT2G24840
N
0.000
AT4G36590
Arabidopsis thaliana
AT4G36590
N
0.000
Bo1g112460
Brassica oleracea
Bo1g112460
N
0.000
Bo4g070340
Brassica oleracea
Bo4g070340
N
0.000
Bo4g157220
Brassica oleracea
Bo4g157220
N
0.000
Bo4g165540
Brassica oleracea
Bo4g165540
N
0.000
Bo5g113750
Brassica oleracea
Bo5g113750
N
0.000
Bo8g099550
Brassica oleracea
Bo8g099550
N
0.000
Bo9g142570
Brassica oleracea
Bo9g142570
N
0.000
Bra002480
Brassica rapa
Bra002480
N
0.000
Bra007829
Brassica rapa
Bra007829
N
0.000
Bra011938
Brassica rapa
Bra011938
N
0.000
Bra020247
Brassica rapa
Bra020247
N
0.000
Bra022434
Brassica rapa
Bra022434
N
0.000
Bra026764
Brassica rapa
Bra026764
N
0.000
Bra032057
Brassica rapa
Bra032057
N
0.000
Bra035685
Brassica rapa
Bra035685
N
0.000
Bra038225
Brassica rapa
Bra038225
N
0.000
AGL62
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_8002041
N
0.000
fgenesh1_pm.C_scaffold_7000337
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_7000337
N
0.000
GLYMA02G35080
Glycine max
GLYMA02G35080
N
0.000
GLYMA10G10610
Glycine max
GLYMA10G10610
N
0.000
GLYMA10G10640
Glycine max
GLYMA10G10640
N
0.000
GLYMA10G10690
Glycine max
GLYMA10G10690
N
0.000
GLYMA10G10770
Glycine max
GLYMA10G10770
N
0.000
GLYMA10G10840
Glycine max
GLYMA10G10840
N
0.000
GLYMA10G10860
Glycine max
GLYMA10G10860
N
0.000
GLYMA10G10900
Glycine max
GLYMA10G10900
N
0.000
GLYMA10G10920
Glycine max
GLYMA10G10920
N
0.000
GLYMA10G10930
Glycine max
GLYMA10G10930
N
0.000
GLYMA10G11450
Glycine max
GLYMA10G11450
N
0.000
GLYMA10G40070
Glycine max
GLYMA10G40070
N
0.000
GLYMA10G40080
Glycine max
GLYMA10G40080
N
0.000
GLYMA13G39016
Glycine max
GLYMA13G39016
N
0.000
GLYMA20G27320
Glycine max
GLYMA20G27320
N
0.000
GLYMA20G27330
Glycine max
GLYMA20G27330
N
0.000
GLYMA20G27341
Glycine max
GLYMA20G27341
N
0.000
GLYMA20G27350
Glycine max
GLYMA20G27350
N
0.000
MTR_0121s0080
Medicago truncatula
MTR_0121s0080
N
0.000
MTR_0121s0100
Medicago truncatula
MTR_0121s0100
N
0.000
MTR_1g012570
Medicago truncatula
MTR_1g012570
N
0.000
MTR_1g075570
Medicago truncatula
MTR_1g075570
N
0.000
MTR_1g075600
Medicago truncatula
MTR_1g075600
N
0.000
MTR_1g077360
Medicago truncatula
MTR_1g077360
N
0.000
MTR_1g105905
Medicago truncatula
MTR_1g105905
N
0.000
MTR_1g105910
Medicago truncatula
MTR_1g105910
N
0.000
MTR_1g105920
Medicago truncatula
MTR_1g105920
N
0.000
MTR_1g108500
Medicago truncatula
MTR_1g108500
N
0.000
MTR_1g108510
Medicago truncatula
MTR_1g108510
N
0.000
MTR_1g108580
Medicago truncatula
MTR_1g108580
N
0.000
MTR_2g030740
Medicago truncatula
MTR_2g030740
N
0.000
MTR_2g085250
Medicago truncatula
MTR_2g085250
N
0.000
MTR_2g085280
Medicago truncatula
MTR_2g085280
N
0.000
MTR_2g093190
Medicago truncatula
MTR_2g093190
N
0.000
MTR_3g030770
Medicago truncatula
MTR_3g030770
N
0.000
MTR_3g052870
Medicago truncatula
MTR_3g052870
N
0.000
MTR_3g052920
Medicago truncatula
MTR_3g052920
N
0.000
MTR_3g067875
Medicago truncatula
MTR_3g067875
N
0.000
MTR_3g067910
Medicago truncatula
MTR_3g067910
N
0.000
MTR_3g080940
Medicago truncatula
MTR_3g080940
N
0.000
MTR_5g045560
Medicago truncatula
MTR_5g045560
N
0.000
MTR_5g053390
Medicago truncatula
MTR_5g053390
N
0.000
MTR_5g055100
Medicago truncatula
MTR_5g055100
N
0.000
MTR_8g043650
Medicago truncatula
MTR_8g043650
N
0.000
PGSC0003DMG400005131
Solanum tuberosum
PGSC0003DMG400005131
N
0.000
PGSC0003DMG400036160
Solanum tuberosum
PGSC0003DMG400036160
N
0.000
PGSC0003DMG400040127
Solanum tuberosum
PGSC0003DMG400040127
N
0.000
PGSC0003DMG400041035
Solanum tuberosum
PGSC0003DMG400041035
N
0.000
PGSC0003DMG400043633
Solanum tuberosum
PGSC0003DMG400043633
N
0.000
PGSC0003DMG400044387
Solanum tuberosum
PGSC0003DMG400044387
N
0.000
PGSC0003DMG400045239
Solanum tuberosum
PGSC0003DMG400045239
N
0.000
POPTR_0007s03410
Populus trichocarpa
POPTR_0007s03410
N
0.000
POPTR_0007s03430
Populus trichocarpa
POPTR_0007s03430
N
0.000
POPTR_0009s08750
Populus trichocarpa
POPTR_0009s08750
N
0.000
POPTR_0017s07460
Populus trichocarpa
POPTR_0017s07460
N
0.000
PRUPE_ppa017246mg
Prunus persica
PRUPE_ppa017246mg
N
0.000
PRUPE_ppa022494mg
Prunus persica
PRUPE_ppa022494mg
N
0.000
PRUPE_ppa023670mg
Prunus persica
PRUPE_ppa023670mg
N
0.000
PRUPE_ppa026089mg
Prunus persica
PRUPE_ppa026089mg
N
0.000
PRUPE_ppa026127mg
Prunus persica
PRUPE_ppa026127mg
N
0.000
scaffold_400572.1
Arabidopsis lyrata
scaffold_400572.1
N
0.000
Solyc01g106710.1
Solanum lycopersicum
Solyc01g106710.1
N
0.000
Solyc01g106720.1
Solanum lycopersicum
Solyc01g106720.1
N
0.000
Solyc01g106730.1
Solanum lycopersicum
Solyc01g106730.1
N
0.000
TCM_006323
Theobroma cacao
TCM_006323
N
0.000
TCM_006324
Theobroma cacao
TCM_006324
N
0.000
TCM_006325
Theobroma cacao
TCM_006325
N
0.000
TCM_040735
Theobroma cacao
TCM_040735
N
0.000
VIT_01s0010g01500
Vitis vinifera
VIT_01s0010g01500
N
0.000
VIT_01s0010g01530
Vitis vinifera
VIT_01s0010g01530
N
0.000
VIT_03s0088g00510
Vitis vinifera
VIT_03s0088g00510
N
0.000
VIT_03s0088g00550
Vitis vinifera
VIT_03s0088g00550
N
0.000
VIT_03s0088g00590
Vitis vinifera
VIT_03s0088g00590
N
0.000
VIT_03s0088g00600
Vitis vinifera
VIT_03s0088g00600
N
0.000
VIT_03s0088g00610
Vitis vinifera
VIT_03s0088g00610
N
0.000
VIT_07s0005g06590
Vitis vinifera
VIT_07s0005g06590
N
0.000
VIT_10s0003g03970
Vitis vinifera
VIT_10s0003g03970
N
0.000
Ca_04659
Cicer arietinum
Ca_04659
N
0.000
Ca_04660
Cicer arietinum
Ca_04660
N
0.000
Ca_04661
Cicer arietinum
Ca_04661
N
0.000
Ca_04662
Cicer arietinum
Ca_04662
N
0.000
Ca_04665
Cicer arietinum
Ca_04665
N
0.000
Ca_07607
Cicer arietinum
Ca_07607
N
0.000
Ca_26354
Cicer arietinum
Ca_26354
N
0.000
Cla006571
Citrullus lanatus
Cla006571
N
0.000
Pm016629
Prunus mume
Pm016629
N
0.000
Pm021017
Prunus mume
Pm021017
N
0.000
Pm021018
Prunus mume
Pm021018
N
0.000
Pm021070
Prunus mume
Pm021070
N
0.000
Pm021071
Prunus mume
Pm021071
N
0.000
29613.m000367
Ricinus communis
29613.m000367
N
0.000
29838.m001672
Ricinus communis
29838.m001672
N
0.000
30099.m001672
Ricinus communis
30099.m001672
N
0.000
cassava21387.m1
Manihot esculenta
cassava21387.m1
N
0.000
cassava21573.m1
Manihot esculenta
cassava21573.m1
N
0.000
cassava33542.m1
Manihot esculenta
cassava33542.m1
N
0.000
cassava8711.m1
Manihot esculenta
cassava8711.m1
N
0.000
Cucsa.298560
Cucumis sativus
Cucsa.298560
N
0.000
mgf018529m
Mimulus guttatus
mgf018529m
N
0.000
mgf022147m
Mimulus guttatus
mgf022147m
N
0.000
mgf022625m
Mimulus guttatus
mgf022625m
N
0.000
mgf022790m
Mimulus guttatus
mgf022790m
N
0.000
mgf024307m
Mimulus guttatus
mgf024307m
N
0.000
Aquca_054_00126
Aquilegia coerulea
Aquca_054_00126
N
0.000
Bostr.26833s0197
Boechera stricta
Bostr.26833s0197
N
0.000
Bostr.5325s0071
Boechera stricta
Bostr.5325s0071
N
0.000
Bostr.7867s1515
Boechera stricta
Bostr.7867s1515
N
0.000
Bostr.8705s0016
Boechera stricta
Bostr.8705s0016
N
0.000
Cagra.1004s0007
Capsella grandiflora
Cagra.1004s0007
N
0.000
Cagra.1695s0023
Capsella grandiflora
Cagra.1695s0023
N
0.000
Cagra.1968s0094
Capsella grandiflora
Cagra.1968s0094
N
0.000
Cagra.2519s0016
Capsella grandiflora
Cagra.2519s0016
N
0.000
Carubv10007644m.g
Capsella rubella
Carubv10007644m.g
N
0.000
Carubv10010156m.g
Capsella rubella
Carubv10010156m.g
N
0.000
Carubv10024914m.g
Capsella rubella
Carubv10024914m.g
N
0.000
Carubv10028580m.g
Capsella rubella
Carubv10028580m.g
N
0.000
Ciclev10030142m.g
Citrus clementina
Ciclev10030142m.g
N
0.000
Ciclev10030327m.g
Citrus clementina
Ciclev10030327m.g
N
0.000
Eucgr.G01185
Eucalyptus grandis
Eucgr.G01185
N
0.000
Eucgr.H04834
Eucalyptus grandis
Eucgr.H04834
N
0.000
Eucgr.I02506
Eucalyptus grandis
Eucgr.I02506
N
0.000
evm.TU.contig_24748.4
Carica papaya
evm.TU.contig_24748.4
N
0.000
evm.TU.contig_24748.5
Carica papaya
evm.TU.contig_24748.5
N
0.000
evm.TU.contig_26687.3
Carica papaya
evm.TU.contig_26687.3
N
0.000
evm.TU.contig_27313
Carica papaya
evm.TU.contig_27313
N
0.000
evm.TU.contig_27553.3
Carica papaya
evm.TU.contig_27553.3
N
0.000
evm.TU.contig_28241.1
Carica papaya
evm.TU.contig_28241.1
N
0.000
evm.TU.contig_30005.2
Carica papaya
evm.TU.contig_30005.2
N
0.000
evm.TU.contig_30005.4
Carica papaya
evm.TU.contig_30005.4
N
0.000
evm.TU.contig_30114.1
Carica papaya
evm.TU.contig_30114.1
N
0.000
evm.TU.contig_30689
Carica papaya
evm.TU.contig_30689
N
0.000
evm.TU.contig_30908.1
Carica papaya
evm.TU.contig_30908.1
N
0.000
evm.TU.contig_31965.1
Carica papaya
evm.TU.contig_31965.1
N
0.000
evm.TU.contig_33038
Carica papaya
evm.TU.contig_33038
N
0.000
evm.TU.contig_33091.2
Carica papaya
evm.TU.contig_33091.2
N
0.000
evm.TU.contig_35157.1
Carica papaya
evm.TU.contig_35157.1
N
0.000
evm.TU.contig_35554.1
Carica papaya
evm.TU.contig_35554.1
N
0.000
evm.TU.contig_35713
Carica papaya
evm.TU.contig_35713
N
0.000
evm.TU.contig_35751
Carica papaya
evm.TU.contig_35751
N
0.000
evm.TU.contig_37082
Carica papaya
evm.TU.contig_37082
N
0.000
evm.TU.contig_37271
Carica papaya
evm.TU.contig_37271
N
0.000
evm.TU.contig_37489
Carica papaya
evm.TU.contig_37489
N
0.000
evm.TU.contig_37718
Carica papaya
evm.TU.contig_37718
N
0.000
evm.TU.contig_37906
Carica papaya
evm.TU.contig_37906
N
0.000
evm.TU.contig_38604
Carica papaya
evm.TU.contig_38604
N
0.000
evm.TU.contig_38802
Carica papaya
evm.TU.contig_38802
N
0.000
evm.TU.contig_41453
Carica papaya
evm.TU.contig_41453
N
0.000
evm.TU.contig_41623
Carica papaya
evm.TU.contig_41623
N
0.000
evm.TU.contig_46312
Carica papaya
evm.TU.contig_46312
N
0.000
evm.TU.supercontig_106.18
Carica papaya
evm.TU.supercontig_106.18
N
0.000
evm.TU.supercontig_106.19
Carica papaya
evm.TU.supercontig_106.19
N
0.000
evm.TU.supercontig_106.20
Carica papaya
evm.TU.supercontig_106.20
N
0.000
evm.TU.supercontig_109.51
Carica papaya
evm.TU.supercontig_109.51
N
0.000
evm.TU.supercontig_1259.1
Carica papaya
evm.TU.supercontig_1259.1
N
0.000
evm.TU.supercontig_1455.2
Carica papaya
evm.TU.supercontig_1455.2
N
0.000
evm.TU.supercontig_20.86
Carica papaya
evm.TU.supercontig_20.86
N
0.000
evm.TU.supercontig_347.10
Carica papaya
evm.TU.supercontig_347.10
N
0.000
evm.TU.supercontig_347.11
Carica papaya
evm.TU.supercontig_347.11
N
0.000
evm.TU.supercontig_347.14
Carica papaya
evm.TU.supercontig_347.14
N
0.000
evm.TU.supercontig_347.2
Carica papaya
evm.TU.supercontig_347.2
N
0.000
evm.TU.supercontig_347.5
Carica papaya
evm.TU.supercontig_347.5
N
0.000
evm.TU.supercontig_347.7
Carica papaya
evm.TU.supercontig_347.7
N
0.000
evm.TU.supercontig_347.8
Carica papaya
evm.TU.supercontig_347.8
N
0.000
evm.TU.supercontig_348.10
Carica papaya
evm.TU.supercontig_348.10
N
0.000
evm.TU.supercontig_348.3
Carica papaya
evm.TU.supercontig_348.3
N
0.000
evm.TU.supercontig_348.4
Carica papaya
evm.TU.supercontig_348.4
N
0.000
evm.TU.supercontig_348.8
Carica papaya
evm.TU.supercontig_348.8
N
0.000
evm.TU.supercontig_439.1
Carica papaya
evm.TU.supercontig_439.1
N
0.000
evm.TU.supercontig_439.7
Carica papaya
evm.TU.supercontig_439.7
N
0.000
evm.TU.supercontig_505.2
Carica papaya
evm.TU.supercontig_505.2
N
0.000
evm.TU.supercontig_505.4
Carica papaya
evm.TU.supercontig_505.4
N
0.000
evm.TU.supercontig_505.5
Carica papaya
evm.TU.supercontig_505.5
N
0.000
evm.TU.supercontig_505.6
Carica papaya
evm.TU.supercontig_505.6
N
0.000
evm.TU.supercontig_54.67
Carica papaya
evm.TU.supercontig_54.67
N
0.000
evm.TU.supercontig_54.68
Carica papaya
evm.TU.supercontig_54.68
N
0.000
evm.TU.supercontig_625.4
Carica papaya
evm.TU.supercontig_625.4
N
0.000
evm.TU.supercontig_654.4
Carica papaya
evm.TU.supercontig_654.4
N
0.000
evm.TU.supercontig_654.5
Carica papaya
evm.TU.supercontig_654.5
N
0.000
evm.TU.supercontig_654.6
Carica papaya
evm.TU.supercontig_654.6
N
0.000
evm.TU.supercontig_695.1
Carica papaya
evm.TU.supercontig_695.1
N
0.000
evm.TU.supercontig_695.5
Carica papaya
evm.TU.supercontig_695.5
N
0.000
evm.TU.supercontig_695.7
Carica papaya
evm.TU.supercontig_695.7
N
0.000
evm.TU.supercontig_758.1
Carica papaya
evm.TU.supercontig_758.1
N
0.000
evm.TU.supercontig_758.2
Carica papaya
evm.TU.supercontig_758.2
N
0.000
evm.TU.supercontig_758.4
Carica papaya
evm.TU.supercontig_758.4
N
0.000
evm.TU.supercontig_851.1
Carica papaya
evm.TU.supercontig_851.1
N
0.000
gene01789-v1.0-hybrid
Fragaria vesca
gene01789-v1.0-hybrid
N
0.000
Gorai.002G213500
Gossypium raimondii
Gorai.002G213500
N
0.000
Gorai.005G263100
Gossypium raimondii
Gorai.005G263100
N
0.000
Gorai.006G127800
Gossypium raimondii
Gorai.006G127800
N
0.000
Gorai.012G163200
Gossypium raimondii
Gorai.012G163200
N
0.000
Gorai.N026300
Gossypium raimondii
Gorai.N026300
N
0.000
Lus10012449.g
Linum usitatissimum
Lus10012449.g
N
0.000
Lus10020511.g
Linum usitatissimum
Lus10020511.g
N
0.000
Lus10030663.g
Linum usitatissimum
Lus10030663.g
N
0.000
Lus10031073.g
Linum usitatissimum
Lus10031073.g
N
0.000
Lus10035456.g
Linum usitatissimum
Lus10035456.g
N
0.000
MDP0000168914
Malus domestica
MDP0000168914
N
0.000
MDP0000221590
Malus domestica
MDP0000221590
N
0.000
MDP0000233925
Malus domestica
MDP0000233925
N
0.000
orange1.1g039654m.g
Citrus sinensis
orange1.1g039654m.g
N
0.000
orange1.1g045249m.g
Citrus sinensis
orange1.1g045249m.g
N
0.000
SapurV1A.0019s0690
Salix purpurea
SapurV1A.0019s0690
N
0.000
SapurV1A.0808s0160
Salix purpurea
SapurV1A.0808s0160
N
0.000
SapurV1A.1313s0050
Salix purpurea
SapurV1A.1313s0050
N
0.000
Thhalv10000432m.g
Eutrema salsugineum
Thhalv10000432m.g
N
0.000
Thhalv10000479m.g
Eutrema salsugineum
Thhalv10000479m.g
N
0.000
Thhalv10003315m.g
Eutrema salsugineum
Thhalv10003315m.g
N
0.000
Thhalv10003338m.g
Eutrema salsugineum
Thhalv10003338m.g
N
0.000
Thhalv10003426m.g
Eutrema salsugineum
Thhalv10003426m.g
N
0.000
Thhalv10015908m.g
Eutrema salsugineum
Thhalv10015908m.g
N
0.000
Thhalv10017754m.g
Eutrema salsugineum
Thhalv10017754m.g
N
0.000
Thhalv10022102m.g
Eutrema salsugineum
Thhalv10022102m.g
N
0.000
Thhalv10027307m.g
Eutrema salsugineum
Thhalv10027307m.g
N
0.000
Thhalv10028255m.g
Eutrema salsugineum
Thhalv10028255m.g
N
0.000
chr1.CM0088.830.nc
Lotus japonicus
chr1.CM0088.830.nc
N
0.000
chr1.LjB17A22.10.nc
Lotus japonicus
chr1.LjB17A22.10.nc
N
0.000
chr1.LjB17A22.60.nc
Lotus japonicus
chr1.LjB17A22.60.nc
N
0.000
chr1.LjB17A22.80.nc
Lotus japonicus
chr1.LjB17A22.80.nc
N
0.000
chr2.CM0904.120.nd
Lotus japonicus
chr2.CM0904.120.nd
N
0.000
chr3.CM0279.290.nc
Lotus japonicus
chr3.CM0279.290.nc
N
0.000
chr5.LjT25B19.190.nd
Lotus japonicus
chr5.LjT25B19.190.nd
N
0.000
chr5.LjT39E05.40.nd
Lotus japonicus
chr5.LjT39E05.40.nd
N
0.000
LjSGA_025167.1
Lotus japonicus
LjSGA_025167.1
N
0.000
LjSGA_042140.1
Lotus japonicus
LjSGA_042140.1
N
0.000
LjSGA_074894.2
Lotus japonicus
LjSGA_074894.2
N
0.000
LjSGA_079719.1
Lotus japonicus
LjSGA_079719.1
N
0.000