VIT_01s0010g01530 (Vitis vinifera)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 VIT_01s0010g01530 T256767_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_01s0010g01530.t01 MADS box 17 64

Links

Other MADS box family TFs
Other Vitis vinifera TFs

258 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGL62 Arabidopsis thaliana AT5G60440 I 0.833
GRMZM2G137289 Zea mays GRMZM2G137289 I 0.708
scaffold_302326.1 Arabidopsis lyrata scaffold_302326.1 I 0.854
gene01788-v1.0-hybrid Fragaria vesca gene01788-v1.0-hybrid I 0.771
MDP0000434703 Malus domestica MDP0000434703 I 0.812
Thhalv10012100m.g Eutrema salsugineum Thhalv10012100m.g I 0.737
Al_scaffold_0001_74 Arabidopsis lyrata Al_scaffold_0001_74 N 0.812
Al_scaffold_0002_1221 Arabidopsis lyrata Al_scaffold_0002_1221 N 0.833
AGL61 Arabidopsis lyrata Al_scaffold_0004_541 N 0.812
AGL28 Arabidopsis thaliana AT1G01530 N 0.792
AGL23 Arabidopsis thaliana AT1G65360 N 0.708
AGL61 Arabidopsis thaliana AT2G24840 N 0.812
AT4G36590 Arabidopsis thaliana AT4G36590 N 0.771
Bo1g112460 Brassica oleracea Bo1g112460 N 0.792
Bo2g024870 Brassica oleracea Bo2g024870 N 0.729
Bo2g024900 Brassica oleracea Bo2g024900 N 0.708
Bo4g157220 Brassica oleracea Bo4g157220 N 0.750
Bo5g113750 Brassica oleracea Bo5g113750 N 0.812
Bo8g099550 Brassica oleracea Bo8g099550 N 0.771
Bo9g142570 Brassica oleracea Bo9g142570 N 0.771
Bra002480 Brassica rapa Bra002480 N 0.792
Bra007829 Brassica rapa Bra007829 N 0.771
Bra020242 Brassica rapa Bra020242 N 0.708
Bra020247 Brassica rapa Bra020247 N 0.708
Bra022434 Brassica rapa Bra022434 N 0.792
Bra026764 Brassica rapa Bra026764 N 0.771
Bra032057 Brassica rapa Bra032057 N 0.750
Bra038225 Brassica rapa Bra038225 N 0.771
AGL62 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002041 N 0.833
fgenesh1_pm.C_scaffold_7000337 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7000337 N 0.792
GLYMA10G40070 Glycine max GLYMA10G40070 N 0.729
GLYMA10G40080 Glycine max GLYMA10G40080 N 0.750
GLYMA13G39016 Glycine max GLYMA13G39016 N 0.750
GLYMA20G27320 Glycine max GLYMA20G27320 N 0.792
GLYMA20G27330 Glycine max GLYMA20G27330 N 0.771
GLYMA20G27341 Glycine max GLYMA20G27341 N 0.771
GLYMA20G27350 Glycine max GLYMA20G27350 N 0.729
MTR_1g012570 Medicago truncatula MTR_1g012570 N 0.812
MTR_1g075570 Medicago truncatula MTR_1g075570 N 0.733
MTR_1g075600 Medicago truncatula MTR_1g075600 N 0.771
MTR_1g077360 Medicago truncatula MTR_1g077360 N 0.771
MTR_1g105905 Medicago truncatula MTR_1g105905 N 0.745
MTR_1g105910 Medicago truncatula MTR_1g105910 N 0.771
MTR_1g105920 Medicago truncatula MTR_1g105920 N 0.771
MTR_1g108510 Medicago truncatula MTR_1g108510 N 0.750
MTR_1g108580 Medicago truncatula MTR_1g108580 N 0.729
MTR_2g030740 Medicago truncatula MTR_2g030740 N 0.771
MTR_2g085250 Medicago truncatula MTR_2g085250 N 0.792
MTR_2g085280 Medicago truncatula MTR_2g085280 N 0.792
MTR_2g093190 Medicago truncatula MTR_2g093190 N 0.708
MTR_3g030770 Medicago truncatula MTR_3g030770 N 0.750
MTR_3g052870 Medicago truncatula MTR_3g052870 N 0.771
MTR_3g052920 Medicago truncatula MTR_3g052920 N 0.812
MTR_3g067875 Medicago truncatula MTR_3g067875 N 0.745
MTR_3g080940 Medicago truncatula MTR_3g080940 N 0.729
MTR_5g045560 Medicago truncatula MTR_5g045560 N 0.812
MTR_5g053390 Medicago truncatula MTR_5g053390 N 0.750
MTR_5g055100 Medicago truncatula MTR_5g055100 N 0.792
MTR_8g043650 Medicago truncatula MTR_8g043650 N 0.771
PGSC0003DMG400005131 Solanum tuberosum PGSC0003DMG400005131 N 0.750
PGSC0003DMG400006290 Solanum tuberosum PGSC0003DMG400006290 N 0.723
PGSC0003DMG400034832 Solanum tuberosum PGSC0003DMG400034832 N 0.762
PGSC0003DMG400035221 Solanum tuberosum PGSC0003DMG400035221 N 0.729
PGSC0003DMG400036006 Solanum tuberosum PGSC0003DMG400036006 N 0.787
PGSC0003DMG400036160 Solanum tuberosum PGSC0003DMG400036160 N 0.792
PGSC0003DMG400040127 Solanum tuberosum PGSC0003DMG400040127 N 0.729
PGSC0003DMG400041035 Solanum tuberosum PGSC0003DMG400041035 N 0.812
PGSC0003DMG400043633 Solanum tuberosum PGSC0003DMG400043633 N 0.750
PGSC0003DMG400043978 Solanum tuberosum PGSC0003DMG400043978 N 0.702
PGSC0003DMG400044387 Solanum tuberosum PGSC0003DMG400044387 N 0.729
PGSC0003DMG400044513 Solanum tuberosum PGSC0003DMG400044513 N 0.708
PGSC0003DMG400045239 Solanum tuberosum PGSC0003DMG400045239 N 0.750
POPTR_0007s03410 Populus trichocarpa POPTR_0007s03410 N 0.750
POPTR_0007s03430 Populus trichocarpa POPTR_0007s03430 N 0.812
POPTR_0008s04110 Populus trichocarpa POPTR_0008s04110 N 0.708
POPTR_0009s08740 Populus trichocarpa POPTR_0009s08740 N 0.708
POPTR_0009s08750 Populus trichocarpa POPTR_0009s08750 N 0.771
POPTR_0017s06710 Populus trichocarpa POPTR_0017s06710 N 0.708
POPTR_0017s06800 Populus trichocarpa POPTR_0017s06800 N 0.708
POPTR_0017s07460 Populus trichocarpa POPTR_0017s07460 N 0.833
PRUPE_ppa017246mg Prunus persica PRUPE_ppa017246mg N 0.771
PRUPE_ppa022494mg Prunus persica PRUPE_ppa022494mg N 0.750
PRUPE_ppa023670mg Prunus persica PRUPE_ppa023670mg N 0.708
PRUPE_ppa026089mg Prunus persica PRUPE_ppa026089mg N 0.792
PRUPE_ppa026127mg Prunus persica PRUPE_ppa026127mg N 0.833
scaffold_400572.1 Arabidopsis lyrata scaffold_400572.1 N 0.792
Solyc01g060300.1 Solanum lycopersicum Solyc01g060300.1 N 0.723
Solyc01g060310.1 Solanum lycopersicum Solyc01g060310.1 N 0.745
Solyc01g106710.1 Solanum lycopersicum Solyc01g106710.1 N 0.729
Solyc01g106720.1 Solanum lycopersicum Solyc01g106720.1 N 0.750
Solyc01g106730.1 Solanum lycopersicum Solyc01g106730.1 N 0.833
Solyc04g047870.1 Solanum lycopersicum Solyc04g047870.1 N 0.750
TCM_006323 Theobroma cacao TCM_006323 N 0.854
TCM_006324 Theobroma cacao TCM_006324 N 0.729
TCM_040735 Theobroma cacao TCM_040735 N 0.729
VIT_01s0010g01500 Vitis vinifera VIT_01s0010g01500 N 0.854
VIT_03s0088g00510 Vitis vinifera VIT_03s0088g00510 N 0.854
VIT_03s0088g00550 Vitis vinifera VIT_03s0088g00550 N 0.812
VIT_03s0088g00590 Vitis vinifera VIT_03s0088g00590 N 0.729
VIT_03s0088g00600 Vitis vinifera VIT_03s0088g00600 N 0.875
VIT_03s0088g00610 Vitis vinifera VIT_03s0088g00610 N 0.708
Ca_04659 Cicer arietinum Ca_04659 N 0.792
Ca_04660 Cicer arietinum Ca_04660 N 0.792
Ca_04661 Cicer arietinum Ca_04661 N 0.750
Ca_04662 Cicer arietinum Ca_04662 N 0.729
Ca_04665 Cicer arietinum Ca_04665 N 0.792
Ca_07607 Cicer arietinum Ca_07607 N 0.729
Ca_26354 Cicer arietinum Ca_26354 N 0.729
Cla006571 Citrullus lanatus Cla006571 N 0.854
Pm016629 Prunus mume Pm016629 N 0.708
Pm021017 Prunus mume Pm021017 N 0.750
Pm021018 Prunus mume Pm021018 N 0.792
Pm021070 Prunus mume Pm021070 N 0.771
Pm021071 Prunus mume Pm021071 N 0.833
27866.m000233 Ricinus communis 27866.m000233 N 0.708
29613.m000367 Ricinus communis 29613.m000367 N 0.771
29838.m001672 Ricinus communis 29838.m001672 N 0.729
30099.m001671 Ricinus communis 30099.m001671 N 0.729
30099.m001672 Ricinus communis 30099.m001672 N 0.833
cassava21387.m1 Manihot esculenta cassava21387.m1 N 0.750
cassava21573.m1 Manihot esculenta cassava21573.m1 N 0.708
cassava33542.m1 Manihot esculenta cassava33542.m1 N 0.833
cassava41915.m1 Manihot esculenta cassava41915.m1 N 0.750
cassava8711.m1 Manihot esculenta cassava8711.m1 N 0.750
Cucsa.298560 Cucumis sativus Cucsa.298560 N 0.854
mgf018529m Mimulus guttatus mgf018529m N 0.729
mgf022147m Mimulus guttatus mgf022147m N 0.750
mgf022625m Mimulus guttatus mgf022625m N 0.708
mgf022790m Mimulus guttatus mgf022790m N 0.729
mgf024307m Mimulus guttatus mgf024307m N 0.729
Aquca_041_00050 Aquilegia coerulea Aquca_041_00050 N 0.708
Bostr.26833s0197 Boechera stricta Bostr.26833s0197 N 0.854
Bostr.5325s0071 Boechera stricta Bostr.5325s0071 N 0.750
Bostr.7867s1515 Boechera stricta Bostr.7867s1515 N 0.812
Bostr.8705s0016 Boechera stricta Bostr.8705s0016 N 0.833
Cagra.1004s0007 Capsella grandiflora Cagra.1004s0007 N 0.812
Cagra.1695s0023 Capsella grandiflora Cagra.1695s0023 N 0.750
Cagra.1968s0094 Capsella grandiflora Cagra.1968s0094 N 0.729
Cagra.2519s0016 Capsella grandiflora Cagra.2519s0016 N 0.854
Carubv10007644m.g Capsella rubella Carubv10007644m.g N 0.750
Carubv10010156m.g Capsella rubella Carubv10010156m.g N 0.729
Carubv10024914m.g Capsella rubella Carubv10024914m.g N 0.812
Carubv10028580m.g Capsella rubella Carubv10028580m.g N 0.854
Ciclev10030142m.g Citrus clementina Ciclev10030142m.g N 0.833
Eucgr.G01185 Eucalyptus grandis Eucgr.G01185 N 0.729
Eucgr.I02506 Eucalyptus grandis Eucgr.I02506 N 0.771
evm.TU.contig_24748.4 Carica papaya evm.TU.contig_24748.4 N 0.812
evm.TU.contig_24748.5 Carica papaya evm.TU.contig_24748.5 N 0.729
evm.TU.contig_26687.3 Carica papaya evm.TU.contig_26687.3 N 0.854
evm.TU.contig_27313 Carica papaya evm.TU.contig_27313 N 0.812
evm.TU.contig_27553.3 Carica papaya evm.TU.contig_27553.3 N 0.729
evm.TU.contig_27553.5 Carica papaya evm.TU.contig_27553.5 N 0.745
evm.TU.contig_28241.1 Carica papaya evm.TU.contig_28241.1 N 0.833
evm.TU.contig_28241.3 Carica papaya evm.TU.contig_28241.3 N 0.708
evm.TU.contig_30005.4 Carica papaya evm.TU.contig_30005.4 N 0.792
evm.TU.contig_30114.1 Carica papaya evm.TU.contig_30114.1 N 0.812
evm.TU.contig_30689 Carica papaya evm.TU.contig_30689 N 0.792
evm.TU.contig_30908.1 Carica papaya evm.TU.contig_30908.1 N 0.854
evm.TU.contig_31285.2 Carica papaya evm.TU.contig_31285.2 N 0.708
evm.TU.contig_33038 Carica papaya evm.TU.contig_33038 N 0.854
evm.TU.contig_33091.2 Carica papaya evm.TU.contig_33091.2 N 0.714
evm.TU.contig_33091.3 Carica papaya evm.TU.contig_33091.3 N 0.750
evm.TU.contig_34259 Carica papaya evm.TU.contig_34259 N 0.708
evm.TU.contig_35157.1 Carica papaya evm.TU.contig_35157.1 N 0.750
evm.TU.contig_35157.2 Carica papaya evm.TU.contig_35157.2 N 0.708
evm.TU.contig_35176.1 Carica papaya evm.TU.contig_35176.1 N 0.708
evm.TU.contig_35697 Carica papaya evm.TU.contig_35697 N 0.714
evm.TU.contig_35713 Carica papaya evm.TU.contig_35713 N 0.812
evm.TU.contig_35751 Carica papaya evm.TU.contig_35751 N 0.833
evm.TU.contig_37082 Carica papaya evm.TU.contig_37082 N 0.729
evm.TU.contig_37271 Carica papaya evm.TU.contig_37271 N 0.833
evm.TU.contig_37489 Carica papaya evm.TU.contig_37489 N 0.700
evm.TU.contig_38122.1 Carica papaya evm.TU.contig_38122.1 N 0.723
evm.TU.contig_38155.1 Carica papaya evm.TU.contig_38155.1 N 0.729
evm.TU.contig_38329 Carica papaya evm.TU.contig_38329 N 0.708
evm.TU.contig_38604 Carica papaya evm.TU.contig_38604 N 0.729
evm.TU.contig_41453 Carica papaya evm.TU.contig_41453 N 0.717
evm.TU.contig_41623 Carica papaya evm.TU.contig_41623 N 0.792
evm.TU.contig_41894.2 Carica papaya evm.TU.contig_41894.2 N 0.708
evm.TU.contig_43014 Carica papaya evm.TU.contig_43014 N 0.750
evm.TU.contig_47064.2 Carica papaya evm.TU.contig_47064.2 N 0.745
evm.TU.supercontig_106.18 Carica papaya evm.TU.supercontig_106.18 N 0.833
evm.TU.supercontig_106.19 Carica papaya evm.TU.supercontig_106.19 N 0.792
evm.TU.supercontig_106.20 Carica papaya evm.TU.supercontig_106.20 N 0.771
evm.TU.supercontig_106.21 Carica papaya evm.TU.supercontig_106.21 N 0.729
evm.TU.supercontig_109.51 Carica papaya evm.TU.supercontig_109.51 N 0.727
evm.TU.supercontig_1259.1 Carica papaya evm.TU.supercontig_1259.1 N 0.771
evm.TU.supercontig_1455.2 Carica papaya evm.TU.supercontig_1455.2 N 0.854
evm.TU.supercontig_20.86 Carica papaya evm.TU.supercontig_20.86 N 0.750
evm.TU.supercontig_2423.2 Carica papaya evm.TU.supercontig_2423.2 N 0.723
evm.TU.supercontig_347.10 Carica papaya evm.TU.supercontig_347.10 N 0.729
evm.TU.supercontig_347.11 Carica papaya evm.TU.supercontig_347.11 N 0.812
evm.TU.supercontig_347.13 Carica papaya evm.TU.supercontig_347.13 N 0.708
evm.TU.supercontig_347.2 Carica papaya evm.TU.supercontig_347.2 N 0.729
evm.TU.supercontig_347.7 Carica papaya evm.TU.supercontig_347.7 N 0.833
evm.TU.supercontig_347.8 Carica papaya evm.TU.supercontig_347.8 N 0.792
evm.TU.supercontig_348.1 Carica papaya evm.TU.supercontig_348.1 N 0.708
evm.TU.supercontig_348.3 Carica papaya evm.TU.supercontig_348.3 N 0.812
evm.TU.supercontig_348.4 Carica papaya evm.TU.supercontig_348.4 N 0.854
evm.TU.supercontig_348.8 Carica papaya evm.TU.supercontig_348.8 N 0.812
evm.TU.supercontig_348.9 Carica papaya evm.TU.supercontig_348.9 N 0.750
evm.TU.supercontig_439.1 Carica papaya evm.TU.supercontig_439.1 N 0.812
evm.TU.supercontig_439.7 Carica papaya evm.TU.supercontig_439.7 N 0.792
evm.TU.supercontig_505.2 Carica papaya evm.TU.supercontig_505.2 N 0.812
evm.TU.supercontig_505.4 Carica papaya evm.TU.supercontig_505.4 N 0.812
evm.TU.supercontig_505.5 Carica papaya evm.TU.supercontig_505.5 N 0.729
evm.TU.supercontig_505.6 Carica papaya evm.TU.supercontig_505.6 N 0.771
evm.TU.supercontig_54.67 Carica papaya evm.TU.supercontig_54.67 N 0.708
evm.TU.supercontig_54.68 Carica papaya evm.TU.supercontig_54.68 N 0.792
evm.TU.supercontig_625.2 Carica papaya evm.TU.supercontig_625.2 N 0.729
evm.TU.supercontig_625.4 Carica papaya evm.TU.supercontig_625.4 N 0.833
evm.TU.supercontig_654.4 Carica papaya evm.TU.supercontig_654.4 N 0.812
evm.TU.supercontig_654.5 Carica papaya evm.TU.supercontig_654.5 N 0.729
evm.TU.supercontig_654.6 Carica papaya evm.TU.supercontig_654.6 N 0.833
evm.TU.supercontig_695.1 Carica papaya evm.TU.supercontig_695.1 N 0.812
evm.TU.supercontig_695.5 Carica papaya evm.TU.supercontig_695.5 N 0.792
evm.TU.supercontig_695.7 Carica papaya evm.TU.supercontig_695.7 N 0.812
evm.TU.supercontig_695.8 Carica papaya evm.TU.supercontig_695.8 N 0.729
evm.TU.supercontig_758.1 Carica papaya evm.TU.supercontig_758.1 N 0.750
evm.TU.supercontig_758.2 Carica papaya evm.TU.supercontig_758.2 N 0.812
evm.TU.supercontig_758.4 Carica papaya evm.TU.supercontig_758.4 N 0.854
evm.TU.supercontig_851.1 Carica papaya evm.TU.supercontig_851.1 N 0.792
gene01789-v1.0-hybrid Fragaria vesca gene01789-v1.0-hybrid N 0.812
Gorai.002G213500 Gossypium raimondii Gorai.002G213500 N 0.833
Gorai.005G263100 Gossypium raimondii Gorai.005G263100 N 0.792
Gorai.006G127800 Gossypium raimondii Gorai.006G127800 N 0.750
Lus10012449.g Linum usitatissimum Lus10012449.g N 0.771
Lus10020511.g Linum usitatissimum Lus10020511.g N 0.750
Lus10030663.g Linum usitatissimum Lus10030663.g N 0.792
Lus10030824.g Linum usitatissimum Lus10030824.g N 0.792
MDP0000168914 Malus domestica MDP0000168914 N 0.750
MDP0000221590 Malus domestica MDP0000221590 N 0.792
MDP0000233925 Malus domestica MDP0000233925 N 0.792
MDP0000278770 Malus domestica MDP0000278770 N 0.792
orange1.1g039654m.g Citrus sinensis orange1.1g039654m.g N 0.833
SapurV1A.0019s0690 Salix purpurea SapurV1A.0019s0690 N 0.792
SapurV1A.0019s0700 Salix purpurea SapurV1A.0019s0700 N 0.729
SapurV1A.0808s0160 Salix purpurea SapurV1A.0808s0160 N 0.771
SapurV1A.1313s0050 Salix purpurea SapurV1A.1313s0050 N 0.833
Thhalv10000432m.g Eutrema salsugineum Thhalv10000432m.g N 0.750
Thhalv10000479m.g Eutrema salsugineum Thhalv10000479m.g N 0.833
Thhalv10003338m.g Eutrema salsugineum Thhalv10003338m.g N 0.833
Thhalv10003426m.g Eutrema salsugineum Thhalv10003426m.g N 0.833
Thhalv10015908m.g Eutrema salsugineum Thhalv10015908m.g N 0.792
Thhalv10022102m.g Eutrema salsugineum Thhalv10022102m.g N 0.812
Thhalv10027307m.g Eutrema salsugineum Thhalv10027307m.g N 0.750
chr1.CM0088.830.nc Lotus japonicus chr1.CM0088.830.nc N 0.750
chr1.LjB17A22.10.nc Lotus japonicus chr1.LjB17A22.10.nc N 0.708
chr1.LjB17A22.60.nc Lotus japonicus chr1.LjB17A22.60.nc N 0.729
chr2.CM0250.170.nc Lotus japonicus chr2.CM0250.170.nc N 0.708
chr2.CM0904.120.nd Lotus japonicus chr2.CM0904.120.nd N 0.729
chr3.CM0279.290.nc Lotus japonicus chr3.CM0279.290.nc N 0.771
chr5.LjT25B19.190.nd Lotus japonicus chr5.LjT25B19.190.nd N 0.729
chr5.LjT39E05.40.nd Lotus japonicus chr5.LjT39E05.40.nd N 0.792
LjSGA_025167.1 Lotus japonicus LjSGA_025167.1 N 0.771
LjSGA_042140.1 Lotus japonicus LjSGA_042140.1 N 0.708
LjSGA_074894.2 Lotus japonicus LjSGA_074894.2 N 0.708
LjSGA_079719.1 Lotus japonicus LjSGA_079719.1 N 0.729